RNA–Protein interactions for RNA: ENST00000465552.1

CTNNB1-211, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-211ENST00000465552 FHAD1B1AJZ9 1412 aa17.02■□□□□ 0.31
CTNNB1-211ENST00000465552 KIF27Q86VH2 1401 aa17.02■□□□□ 0.31
CTNNB1-211ENST00000465552 RUSC2Q8N2Y8 1516 aa16.96■□□□□ 0.31
CTNNB1-211ENST00000465552 TRIM41Q8WV44 630 aa16.95■□□□□ 0.3
CTNNB1-211ENST00000465552 SHROOM2Q13796 1616 aa16.94■□□□□ 0.3
CTNNB1-211ENST00000465552 NUP160Q12769 1436 aa16.94■□□□□ 0.3
CTNNB1-211ENST00000465552 ARAP1Q96P48 1450 aa16.92■□□□□ 0.3
CTNNB1-211ENST00000465552 ERCC6L2Q5T890 1561 aa16.91■□□□□ 0.3
CTNNB1-211ENST00000465552 IGF1RP08069 1367 aa16.9■□□□□ 0.3
CTNNB1-211ENST00000465552 CTTNBP2Q8WZ74 1663 aa16.9■□□□□ 0.3
CTNNB1-211ENST00000465552 CARMIL1Q5VZK9 1371 aa16.83■□□□□ 0.28
CTNNB1-211ENST00000465552 CYB5RLQ6IPT4 315 aa16.8■□□□□ 0.28
CTNNB1-211ENST00000465552 IQGAP2Q13576 1575 aa16.79■□□□□ 0.28
CTNNB1-211ENST00000465552 RAPGEF2Q9Y4G8 1499 aa16.79■□□□□ 0.28
CTNNB1-211ENST00000465552 KIAA0586Q9BVV6 1533 aa16.75■□□□□ 0.27
CTNNB1-211ENST00000465552 PRG4Q92954 1404 aaPredicted RBP16.75■□□□□ 0.27
CTNNB1-211ENST00000465552 MAPK8IP2Q13387 824 aaPredicted RBP16.7■□□□□ 0.26
CTNNB1-211ENST00000465552 DMRT2Q9Y5R5 561 aa16.7■□□□□ 0.26
CTNNB1-211ENST00000465552 JPH4Q96JJ6 628 aa16.69■□□□□ 0.26
CTNNB1-211ENST00000465552 SCAF1Q9H7N4 1312 aaKnown RBP16.69■□□□□ 0.26
CTNNB1-211ENST00000465552 PRXQ9BXM0 1461 aa16.68■□□□□ 0.26
CTNNB1-211ENST00000465552 FAM9AQ8IZU1 332 aaPredicted RBP16.68■□□□□ 0.26
CTNNB1-211ENST00000465552 EEA1Q15075 1411 aa16.65■□□□□ 0.26
CTNNB1-211ENST00000465552 KIAA0556O60303 1618 aa16.65■□□□□ 0.26
CTNNB1-211ENST00000465552 KIF21BO75037 1637 aa16.64■□□□□ 0.25
CTNNB1-211ENST00000465552 ADCY10Q96PN6 1610 aa16.63■□□□□ 0.25
CTNNB1-211ENST00000465552 UGGT2Q9NYU1 1516 aa16.61■□□□□ 0.25
CTNNB1-211ENST00000465552 CSRNP3Q8WYN3 585 aa16.61■□□□□ 0.25
CTNNB1-211ENST00000465552 TTBK1Q5TCY1 1321 aaPredicted RBP16.6■□□□□ 0.25
CTNNB1-211ENST00000465552 DISP1Q96F81 1524 aa16.6■□□□□ 0.25
CTNNB1-211ENST00000465552 KIF13AQ9H1H9 1805 aa16.59■□□□□ 0.25
CTNNB1-211ENST00000465552 CARMIL2Q6F5E8 1435 aa16.58■□□□□ 0.24
CTNNB1-211ENST00000465552 EHMT2Q96KQ7 1210 aa16.54■□□□□ 0.24
CTNNB1-211ENST00000465552 TNIKQ9UKE5 1360 aa16.51■□□□□ 0.23
CTNNB1-211ENST00000465552 SAMD9Q5K651 1589 aa16.51■□□□□ 0.23
CTNNB1-211ENST00000465552 TRHP20396 242 aaPredicted RBP16.51■□□□□ 0.23
CTNNB1-211ENST00000465552 PTPRGP23470 1445 aa16.5■□□□□ 0.23
CTNNB1-211ENST00000465552 GOLGA3Q08378 1498 aa16.49■□□□□ 0.23
CTNNB1-211ENST00000465552 ZCCHC11Q5TAX3 1644 aaKnown RBP16.48■□□□□ 0.23
CTNNB1-211ENST00000465552 TSPOAP1O95153 1857 aa16.48■□□□□ 0.23
CTNNB1-211ENST00000465552 RANGAP1P46060 587 aaPredicted RBP16.46■□□□□ 0.23
CTNNB1-211ENST00000465552 ABCC2Q92887 1545 aa16.45■□□□□ 0.22
CTNNB1-211ENST00000465552 MAPKBP1O60336 1514 aa16.44■□□□□ 0.22
CTNNB1-211ENST00000465552 DIP2BQ9P265 1576 aa16.43■□□□□ 0.22
CTNNB1-211ENST00000465552 ABCA8O94911 1581 aa16.42■□□□□ 0.22
CTNNB1-211ENST00000465552 P3H3Q8IVL6 736 aa16.41■□□□□ 0.22
CTNNB1-211ENST00000465552 UACAQ9BZF9 1416 aa16.41■□□□□ 0.22
CTNNB1-211ENST00000465552 PLB1Q6P1J6 1458 aa16.41■□□□□ 0.22
CTNNB1-211ENST00000465552 RAPGEF6Q8TEU7 1601 aa16.4■□□□□ 0.22
CTNNB1-211ENST00000465552 UHRF1BP1LA0JNW5 1464 aa16.39■□□□□ 0.21
CTNNB1-211ENST00000465552 EFCAB5A4FU69 1503 aa16.39■□□□□ 0.21
CTNNB1-211ENST00000465552 NPM1P06748 294 aaKnown RBP eCLIP16.38■□□□□ 0.21
CTNNB1-211ENST00000465552 FHOD3Q2V2M9 1422 aa16.37■□□□□ 0.21
CTNNB1-211ENST00000465552 UBTFP17480 764 aaKnown RBP16.37■□□□□ 0.21
CTNNB1-211ENST00000465552 KDM5BQ9UGL1 1544 aa16.34■□□□□ 0.21
CTNNB1-211ENST00000465552 ABCC10Q5T3U5 1492 aa16.32■□□□□ 0.2
CTNNB1-211ENST00000465552 LRRIQ1Q96JM4 1722 aa16.31■□□□□ 0.2
CTNNB1-211ENST00000465552 ASXL2Q76L83 1435 aa16.31■□□□□ 0.2
CTNNB1-211ENST00000465552 PPP4R3CPQ6ZMV5 832 aa16.31■□□□□ 0.2
CTNNB1-211ENST00000465552 PPRC1Q5VV67 1664 aaKnown RBP16.3■□□□□ 0.2
CTNNB1-211ENST00000465552 ARID3CA6NKF2 412 aa16.28■□□□□ 0.2
CTNNB1-211ENST00000465552 ARHGAP35Q9NRY4 1499 aa16.28■□□□□ 0.2
CTNNB1-211ENST00000465552 MAP3K4Q9Y6R4 1608 aa16.27■□□□□ 0.19
CTNNB1-211ENST00000465552 FAM69CQ0P6D2 419 aa16.25■□□□□ 0.19
CTNNB1-211ENST00000465552 CFAP43Q8NDM7 1665 aa16.24■□□□□ 0.19
CTNNB1-211ENST00000465552 WDR7Q9Y4E6 1490 aa16.24■□□□□ 0.19
CTNNB1-211ENST00000465552 HECW1Q76N89 1606 aa16.24■□□□□ 0.19
CTNNB1-211ENST00000465552 GLI2P10070 1586 aa16.24■□□□□ 0.19
CTNNB1-211ENST00000465552 NUP153P49790 1475 aaKnown RBP16.23■□□□□ 0.19
CTNNB1-211ENST00000465552 EPRSP07814 1512 aaKnown RBP16.23■□□□□ 0.19
CTNNB1-211ENST00000465552 PCF11O94913 1555 aaKnown RBP16.22■□□□□ 0.19
CTNNB1-211ENST00000465552 ATP10BO94823 1461 aa16.2■□□□□ 0.18
CTNNB1-211ENST00000465552 CDK13Q14004 1512 aaKnown RBP16.19■□□□□ 0.18
CTNNB1-211ENST00000465552 KDM6BO15054 1643 aa16.19■□□□□ 0.18
CTNNB1-211ENST00000465552 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.15■□□□□ 0.18
CTNNB1-211ENST00000465552 HNRNPUL2Q1KMD3 747 aaKnown RBP16.15■□□□□ 0.18
CTNNB1-211ENST00000465552 FMN1Q68DA7 1419 aa16.15■□□□□ 0.18
CTNNB1-211ENST00000465552 ABCA9Q8IUA7 1624 aa16.15■□□□□ 0.18
CTNNB1-211ENST00000465552 CLIP1P30622 1438 aa16.14■□□□□ 0.17
CTNNB1-211ENST00000465552 KCNH8Q96L42 1107 aa16.12■□□□□ 0.17
CTNNB1-211ENST00000465552 ATP1B4Q9UN42 357 aaPredicted RBP16.12■□□□□ 0.17
CTNNB1-211ENST00000465552 TTC37Q6PGP7 1564 aa16.1■□□□□ 0.17
CTNNB1-211ENST00000465552 CEP162Q5TB80 1403 aa16.1■□□□□ 0.17
CTNNB1-211ENST00000465552 MYO5CQ9NQX4 1742 aa16.09■□□□□ 0.17
CTNNB1-211ENST00000465552 KIF14Q15058 1648 aa16.08■□□□□ 0.17
CTNNB1-211ENST00000465552 LOC105371045A0A1W2PR82 267 aa16.07■□□□□ 0.16
CTNNB1-211ENST00000465552 HOXD11P31277 338 aaPredicted RBP16.07■□□□□ 0.16
CTNNB1-211ENST00000465552 TEX14Q8IWB6 1497 aa16.07■□□□□ 0.16
CTNNB1-211ENST00000465552 CD109Q6YHK3 1445 aa16.05■□□□□ 0.16
CTNNB1-211ENST00000465552 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.04■□□□□ 0.16
CTNNB1-211ENST00000465552 FYCO1Q9BQS8 1478 aa16.04■□□□□ 0.16
CTNNB1-211ENST00000465552 CNKSR2Q8WXI2 1034 aa16.04■□□□□ 0.16
CTNNB1-211ENST00000465552 CASKIN1Q8WXD9 1431 aa16.03■□□□□ 0.16
CTNNB1-211ENST00000465552 MAGI3Q5TCQ9 1506 aa16.02■□□□□ 0.15
CTNNB1-211ENST00000465552 CCDC18Q5T9S5 1454 aa16.02■□□□□ 0.15
CTNNB1-211ENST00000465552 CFAP74Q9C0B2 1584 aa16■□□□□ 0.15
CTNNB1-211ENST00000465552 CDC42BPAQ5VT25 1732 aa15.99■□□□□ 0.15
CTNNB1-211ENST00000465552 CDC42BPBQ9Y5S2 1711 aa15.99■□□□□ 0.15
CTNNB1-211ENST00000465552 PLEKHD1A6NEE1 506 aa15.99■□□□□ 0.15
CTNNB1-211ENST00000465552 COL17A1Q9UMD9 1497 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms