RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 PRXQ9BXM0 1461 aa34.14■■■■□ 3.06
SKA3-205ENST00000465471 KIAA0586Q9BVV6 1533 aa34.09■■■■□ 3.05
SKA3-205ENST00000465471 CSRNP3Q8WYN3 585 aa34.04■■■■□ 3.04
SKA3-205ENST00000465471 ARAP1Q96P48 1450 aa34.01■■■■□ 3.04
SKA3-205ENST00000465471 ERCC6L2Q5T890 1561 aa33.98■■■■□ 3.03
SKA3-205ENST00000465471 JPH4Q96JJ6 628 aa33.94■■■■□ 3.02
SKA3-205ENST00000465471 IQGAP2Q13576 1575 aa33.93■■■■□ 3.02
SKA3-205ENST00000465471 PRG4Q92954 1404 aaPredicted RBP33.9■■■■□ 3.02
SKA3-205ENST00000465471 CTTNBP2Q8WZ74 1663 aa33.9■■■■□ 3.02
SKA3-205ENST00000465471 KIF21BO75037 1637 aa33.86■■■■□ 3.01
SKA3-205ENST00000465471 FAM9AQ8IZU1 332 aaPredicted RBP33.86■■■■□ 3.01
SKA3-205ENST00000465471 CYB5RLQ6IPT4 315 aa33.8■■■■□ 3
SKA3-205ENST00000465471 UGGT2Q9NYU1 1516 aa33.78■■■■□ 3
SKA3-205ENST00000465471 DISP1Q96F81 1524 aa33.69■■■□□ 2.98
SKA3-205ENST00000465471 CARMIL2Q6F5E8 1435 aa33.66■■■□□ 2.98
SKA3-205ENST00000465471 KIAA0556O60303 1618 aa33.63■■■□□ 2.97
SKA3-205ENST00000465471 GOLGA3Q08378 1498 aa33.61■■■□□ 2.97
SKA3-205ENST00000465471 TNIKQ9UKE5 1360 aa33.56■■■□□ 2.96
SKA3-205ENST00000465471 SAMD9Q5K651 1589 aa33.5■■■□□ 2.95
SKA3-205ENST00000465471 PTPRGP23470 1445 aa33.49■■■□□ 2.95
SKA3-205ENST00000465471 ADCY10Q96PN6 1610 aa33.44■■■□□ 2.94
SKA3-205ENST00000465471 UBTFP17480 764 aaKnown RBP33.37■■■□□ 2.93
SKA3-205ENST00000465471 EHMT2Q96KQ7 1210 aa33.35■■■□□ 2.93
SKA3-205ENST00000465471 EFCAB5A4FU69 1503 aa33.34■■■□□ 2.93
SKA3-205ENST00000465471 UHRF1BP1LA0JNW5 1464 aa33.34■■■□□ 2.93
SKA3-205ENST00000465471 UACAQ9BZF9 1416 aa33.31■■■□□ 2.92
SKA3-205ENST00000465471 ABCC2Q92887 1545 aa33.3■■■□□ 2.92
SKA3-205ENST00000465471 TTBK1Q5TCY1 1321 aaPredicted RBP33.28■■■□□ 2.92
SKA3-205ENST00000465471 ABCA8O94911 1581 aa33.26■■■□□ 2.91
SKA3-205ENST00000465471 PLB1Q6P1J6 1458 aa33.23■■■□□ 2.91
SKA3-205ENST00000465471 P3H3Q8IVL6 736 aa33.21■■■□□ 2.91
SKA3-205ENST00000465471 FHOD3Q2V2M9 1422 aa33.2■■■□□ 2.91
SKA3-205ENST00000465471 MAPKBP1O60336 1514 aa33.2■■■□□ 2.91
SKA3-205ENST00000465471 RANGAP1P46060 587 aaPredicted RBP33.19■■■□□ 2.9
SKA3-205ENST00000465471 ARHGAP35Q9NRY4 1499 aa33.18■■■□□ 2.9
SKA3-205ENST00000465471 KDM5BQ9UGL1 1544 aa33.17■■■□□ 2.9
SKA3-205ENST00000465471 NPM1P06748 294 aaKnown RBP eCLIP33.12■■■□□ 2.89
SKA3-205ENST00000465471 ZCCHC11Q5TAX3 1644 aaKnown RBP33.1■■■□□ 2.89
SKA3-205ENST00000465471 RAPGEF6Q8TEU7 1601 aa33.09■■■□□ 2.89
SKA3-205ENST00000465471 KIF13AQ9H1H9 1805 aa33■■■□□ 2.87
SKA3-205ENST00000465471 TRHP20396 242 aaPredicted RBP33■■■□□ 2.87
SKA3-205ENST00000465471 ABCC10Q5T3U5 1492 aa32.99■■■□□ 2.87
SKA3-205ENST00000465471 CLIP1P30622 1438 aa32.99■■■□□ 2.87
SKA3-205ENST00000465471 ASXL2Q76L83 1435 aa32.98■■■□□ 2.87
SKA3-205ENST00000465471 DIP2BQ9P265 1576 aa32.98■■■□□ 2.87
SKA3-205ENST00000465471 NUP153P49790 1475 aaKnown RBP32.98■■■□□ 2.87
SKA3-205ENST00000465471 FMN1Q68DA7 1419 aa32.97■■■□□ 2.87
SKA3-205ENST00000465471 LOC105371045A0A1W2PR82 267 aa32.93■■■□□ 2.86
SKA3-205ENST00000465471 ATP10BO94823 1461 aa32.93■■■□□ 2.86
SKA3-205ENST00000465471 CEP162Q5TB80 1403 aa32.9■■■□□ 2.86
SKA3-205ENST00000465471 WDR7Q9Y4E6 1490 aa32.86■■■□□ 2.85
SKA3-205ENST00000465471 HECW1Q76N89 1606 aa32.84■■■□□ 2.85
SKA3-205ENST00000465471 GLI2P10070 1586 aa32.84■■■□□ 2.85
SKA3-205ENST00000465471 EPRSP07814 1512 aaKnown RBP32.82■■■□□ 2.85
SKA3-205ENST00000465471 FAM69CQ0P6D2 419 aa32.8■■■□□ 2.84
SKA3-205ENST00000465471 PCF11O94913 1555 aaKnown RBP32.79■■■□□ 2.84
SKA3-205ENST00000465471 ARID3CA6NKF2 412 aa32.77■■■□□ 2.84
SKA3-205ENST00000465471 CASKIN1Q8WXD9 1431 aa32.77■■■□□ 2.84
SKA3-205ENST00000465471 LRRIQ1Q96JM4 1722 aa32.74■■■□□ 2.83
SKA3-205ENST00000465471 CDK13Q14004 1512 aaKnown RBP32.72■■■□□ 2.83
SKA3-205ENST00000465471 FYCO1Q9BQS8 1478 aa32.71■■■□□ 2.83
SKA3-205ENST00000465471 MAP3K4Q9Y6R4 1608 aa32.69■■■□□ 2.82
SKA3-205ENST00000465471 PPRC1Q5VV67 1664 aaKnown RBP32.64■■■□□ 2.82
SKA3-205ENST00000465471 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.63■■■□□ 2.81
SKA3-205ENST00000465471 HNRNPUL2Q1KMD3 747 aaKnown RBP32.63■■■□□ 2.81
SKA3-205ENST00000465471 CFAP43Q8NDM7 1665 aa32.62■■■□□ 2.81
SKA3-205ENST00000465471 CCDC18Q5T9S5 1454 aa32.61■■■□□ 2.81
SKA3-205ENST00000465471 TSPOAP1O95153 1857 aa32.61■■■□□ 2.81
SKA3-205ENST00000465471 ABCA9Q8IUA7 1624 aa32.59■■■□□ 2.81
SKA3-205ENST00000465471 ATP1B4Q9UN42 357 aaPredicted RBP32.58■■■□□ 2.81
SKA3-205ENST00000465471 KCNH8Q96L42 1107 aa32.57■■■□□ 2.8
SKA3-205ENST00000465471 PLEKHD1A6NEE1 506 aa32.56■■■□□ 2.8
SKA3-205ENST00000465471 VPS8Q8N3P4 1428 aa32.51■■■□□ 2.79
SKA3-205ENST00000465471 MAGI3Q5TCQ9 1506 aa32.5■■■□□ 2.79
SKA3-205ENST00000465471 CD109Q6YHK3 1445 aa32.5■■■□□ 2.79
SKA3-205ENST00000465471 TROQ12816 1431 aaPredicted RBP32.47■■■□□ 2.79
SKA3-205ENST00000465471 CDK11AQ9UQ88 783 aaPredicted RBP32.47■■■□□ 2.79
SKA3-205ENST00000465471 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.46■■■□□ 2.793e-6■■□□□ 13.1
SKA3-205ENST00000465471 TEX14Q8IWB6 1497 aa32.46■■■□□ 2.79
SKA3-205ENST00000465471 TTC37Q6PGP7 1564 aa32.43■■■□□ 2.78
SKA3-205ENST00000465471 KIF14Q15058 1648 aa32.4■■■□□ 2.78
SKA3-205ENST00000465471 KDM6BO15054 1643 aa32.35■■■□□ 2.77
SKA3-205ENST00000465471 TIAM1Q13009 1591 aa32.3■■■□□ 2.76
SKA3-205ENST00000465471 MYO5CQ9NQX4 1742 aa32.27■■■□□ 2.76
SKA3-205ENST00000465471 NEO1Q92859 1461 aa32.27■■■□□ 2.76
SKA3-205ENST00000465471 COL17A1Q9UMD9 1497 aaPredicted RBP32.27■■■□□ 2.76
SKA3-205ENST00000465471 MAP3K1Q13233 1512 aa32.26■■■□□ 2.76
SKA3-205ENST00000465471 ARAP3Q8WWN8 1544 aa32.26■■■□□ 2.76
SKA3-205ENST00000465471 EHBP1L1Q8N3D4 1523 aa32.26■■■□□ 2.75
SKA3-205ENST00000465471 PLCH2O75038 1416 aa32.25■■■□□ 2.75
SKA3-205ENST00000465471 PHLDB1Q86UU1 1377 aa32.23■■■□□ 2.75
SKA3-205ENST00000465471 CFAP74Q9C0B2 1584 aa32.23■■■□□ 2.75
SKA3-205ENST00000465471 MTUS2Q5JR59 1369 aa32.21■■■□□ 2.75
SKA3-205ENST00000465471 FANCAO15360 1455 aa32.2■■■□□ 2.75
SKA3-205ENST00000465471 PREX2Q70Z35 1606 aa32.18■■■□□ 2.74
SKA3-205ENST00000465471 CDC42BPAQ5VT25 1732 aa32.16■■■□□ 2.74
SKA3-205ENST00000465471 CDC42BPBQ9Y5S2 1711 aa32.16■■■□□ 2.74
SKA3-205ENST00000465471 LRRC9Q6ZRR7 1453 aa32.13■■■□□ 2.73
SKA3-205ENST00000465471 AKNAQ7Z591 1439 aa32.12■■■□□ 2.73
SKA3-205ENST00000465471 ARHGAP5Q13017 1502 aa32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms