RNA–Protein interactions for RNA: ENST00000465402.1

KDM5C-209, Transcript of lysine demethylase 5C, humanhuman

TSL 3

Gene KDM5C, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-209ENST00000465402 SHROOM2Q13796 1616 aa14.76□□□□□ -0.05
KDM5C-209ENST00000465402 FAM9AQ8IZU1 332 aaPredicted RBP14.72□□□□□ -0.05
KDM5C-209ENST00000465402 RUSC2Q8N2Y8 1516 aa14.69□□□□□ -0.06
KDM5C-209ENST00000465402 KIF27Q86VH2 1401 aa14.68□□□□□ -0.06
KDM5C-209ENST00000465402 PRG4Q92954 1404 aaPredicted RBP14.68□□□□□ -0.06
KDM5C-209ENST00000465402 IGF1RP08069 1367 aa14.66□□□□□ -0.06
KDM5C-209ENST00000465402 FOXD1Q16676 465 aa14.65□□□□□ -0.06
KDM5C-209ENST00000465402 CSRNP3Q8WYN3 585 aa14.65□□□□□ -0.06
KDM5C-209ENST00000465402 JPH4Q96JJ6 628 aa14.65□□□□□ -0.06
KDM5C-209ENST00000465402 CUL7Q14999 1698 aa14.61□□□□□ -0.07
KDM5C-209ENST00000465402 GOLGA3Q08378 1498 aa14.58□□□□□ -0.08
KDM5C-209ENST00000465402 KIAA0586Q9BVV6 1533 aa14.57□□□□□ -0.08
KDM5C-209ENST00000465402 KIF21BO75037 1637 aa14.56□□□□□ -0.08
KDM5C-209ENST00000465402 KIF13AQ9H1H9 1805 aa14.56□□□□□ -0.08
KDM5C-209ENST00000465402 CARMIL1Q5VZK9 1371 aa14.56□□□□□ -0.08
KDM5C-209ENST00000465402 ADCY10Q96PN6 1610 aa14.54□□□□□ -0.08
KDM5C-209ENST00000465402 LOC105371045A0A1W2PR82 267 aa14.53□□□□□ -0.08
KDM5C-209ENST00000465402 UBTFP17480 764 aaKnown RBP14.51□□□□□ -0.09
KDM5C-209ENST00000465402 TTBK1Q5TCY1 1321 aaPredicted RBP14.5□□□□□ -0.09
KDM5C-209ENST00000465402 TNIKQ9UKE5 1360 aa14.47□□□□□ -0.09
KDM5C-209ENST00000465402 IQGAP2Q13576 1575 aa14.47□□□□□ -0.09
KDM5C-209ENST00000465402 EHMT2Q96KQ7 1210 aa14.45□□□□□ -0.1
KDM5C-209ENST00000465402 PRXQ9BXM0 1461 aa14.44□□□□□ -0.1
KDM5C-209ENST00000465402 NPM1P06748 294 aaKnown RBP eCLIP14.44□□□□□ -0.1
KDM5C-209ENST00000465402 FAM69CQ0P6D2 419 aa14.44□□□□□ -0.1
KDM5C-209ENST00000465402 MAPKBP1O60336 1514 aa14.44□□□□□ -0.1
KDM5C-209ENST00000465402 ABCC10Q5T3U5 1492 aa14.44□□□□□ -0.1
KDM5C-209ENST00000465402 DIP2BQ9P265 1576 aa14.43□□□□□ -0.1
KDM5C-209ENST00000465402 PTPRGP23470 1445 aa14.43□□□□□ -0.1
KDM5C-209ENST00000465402 RAPGEF2Q9Y4G8 1499 aa14.43□□□□□ -0.1
KDM5C-209ENST00000465402 DISP1Q96F81 1524 aa14.41□□□□□ -0.1
KDM5C-209ENST00000465402 CARMIL2Q6F5E8 1435 aa14.4□□□□□ -0.1
KDM5C-209ENST00000465402 TSPOAP1O95153 1857 aa14.4□□□□□ -0.1
KDM5C-209ENST00000465402 UGGT2Q9NYU1 1516 aa14.36□□□□□ -0.11
KDM5C-209ENST00000465402 CEP162Q5TB80 1403 aa14.36□□□□□ -0.11
KDM5C-209ENST00000465402 CTTNBP2Q8WZ74 1663 aa14.36□□□□□ -0.11
KDM5C-209ENST00000465402 KIAA0556O60303 1618 aa14.35□□□□□ -0.11
KDM5C-209ENST00000465402 ABCC2Q92887 1545 aa14.35□□□□□ -0.11
KDM5C-209ENST00000465402 ASXL2Q76L83 1435 aa14.32□□□□□ -0.12
KDM5C-209ENST00000465402 UACAQ9BZF9 1416 aa14.32□□□□□ -0.12
KDM5C-209ENST00000465402 UHRF1BP1LA0JNW5 1464 aa14.31□□□□□ -0.12
KDM5C-209ENST00000465402 CLIP1P30622 1438 aa14.31□□□□□ -0.12
KDM5C-209ENST00000465402 PLPPR3Q6T4P5 718 aa14.3□□□□□ -0.12
KDM5C-209ENST00000465402 KDM6BO15054 1643 aa14.29□□□□□ -0.12
KDM5C-209ENST00000465402 ZCCHC11Q5TAX3 1644 aaKnown RBP14.29□□□□□ -0.12
KDM5C-209ENST00000465402 PPRC1Q5VV67 1664 aaKnown RBP14.28□□□□□ -0.12
KDM5C-209ENST00000465402 KDM5BQ9UGL1 1544 aa14.27□□□□□ -0.12
KDM5C-209ENST00000465402 PLB1Q6P1J6 1458 aa14.27□□□□□ -0.12
KDM5C-209ENST00000465402 GLI2P10070 1586 aa14.24□□□□□ -0.13
KDM5C-209ENST00000465402 EPRSP07814 1512 aaKnown RBP14.23□□□□□ -0.13
KDM5C-209ENST00000465402 APLP2Q06481 763 aa14.22□□□□□ -0.13
KDM5C-209ENST00000465402 ABCA8O94911 1581 aa14.22□□□□□ -0.13
KDM5C-209ENST00000465402 P3H3Q8IVL6 736 aa14.21□□□□□ -0.13
KDM5C-209ENST00000465402 MAP3K4Q9Y6R4 1608 aa14.21□□□□□ -0.13
KDM5C-209ENST00000465402 EFCAB5A4FU69 1503 aa14.2□□□□□ -0.14
KDM5C-209ENST00000465402 ARID3CA6NKF2 412 aa14.18□□□□□ -0.14
KDM5C-209ENST00000465402 RANGAP1P46060 587 aaPredicted RBP14.18□□□□□ -0.14
KDM5C-209ENST00000465402 COL17A1Q9UMD9 1497 aaPredicted RBP14.18□□□□□ -0.14
KDM5C-209ENST00000465402 WDR7Q9Y4E6 1490 aa14.18□□□□□ -0.14
KDM5C-209ENST00000465402 VPS8Q8N3P4 1428 aa14.17□□□□□ -0.14
KDM5C-209ENST00000465402 KDM4FA0A1W2PPD8 638 aa14.14□□□□□ -0.15
KDM5C-209ENST00000465402 KCNH8Q96L42 1107 aa14.14□□□□□ -0.15
KDM5C-209ENST00000465402 SAMD9Q5K651 1589 aa14.13□□□□□ -0.15
KDM5C-209ENST00000465402 ATP10BO94823 1461 aa14.1□□□□□ -0.15
KDM5C-209ENST00000465402 ARHGAP35Q9NRY4 1499 aa14.1□□□□□ -0.15
KDM5C-209ENST00000465402 TEX14Q8IWB6 1497 aa14.09□□□□□ -0.15
KDM5C-209ENST00000465402 CFAP43Q8NDM7 1665 aa14.09□□□□□ -0.15
KDM5C-209ENST00000465402 FMN1Q68DA7 1419 aa14.08□□□□□ -0.15
KDM5C-209ENST00000465402 FHOD3Q2V2M9 1422 aa14.07□□□□□ -0.16
KDM5C-209ENST00000465402 CD109Q6YHK3 1445 aa14.07□□□□□ -0.16
KDM5C-209ENST00000465402 RAPGEF6Q8TEU7 1601 aa14.07□□□□□ -0.16
KDM5C-209ENST00000465402 MAGI3Q5TCQ9 1506 aa14.05□□□□□ -0.16
KDM5C-209ENST00000465402 TRIM26Q12899 539 aaPredicted RBP14.04□□□□□ -0.16
KDM5C-209ENST00000465402 ADGRL1O94910 1474 aa14.04□□□□□ -0.16
KDM5C-209ENST00000465402 NUP153P49790 1475 aaKnown RBP14.03□□□□□ -0.16
KDM5C-209ENST00000465402 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.01□□□□□ -0.17
KDM5C-209ENST00000465402 HNRNPUL2Q1KMD3 747 aaKnown RBP14.01□□□□□ -0.17
KDM5C-209ENST00000465402 FYCO1Q9BQS8 1478 aa14□□□□□ -0.17
KDM5C-209ENST00000465402 ABCA9Q8IUA7 1624 aa14□□□□□ -0.17
KDM5C-209ENST00000465402 MAP3K1Q13233 1512 aa13.97□□□□□ -0.17
KDM5C-209ENST00000465402 CASKIN1Q8WXD9 1431 aa13.97□□□□□ -0.17
KDM5C-209ENST00000465402 ATP1B4Q9UN42 357 aaPredicted RBP13.95□□□□□ -0.18
KDM5C-209ENST00000465402 CDK13Q14004 1512 aaKnown RBP13.94□□□□□ -0.18
KDM5C-209ENST00000465402 ARAP3Q8WWN8 1544 aa13.94□□□□□ -0.18
KDM5C-209ENST00000465402 PCF11O94913 1555 aaKnown RBP13.93□□□□□ -0.18
KDM5C-209ENST00000465402 HECW1Q76N89 1606 aa13.93□□□□□ -0.18
KDM5C-209ENST00000465402 CCDC18Q5T9S5 1454 aa13.93□□□□□ -0.18
KDM5C-209ENST00000465402 RAPGEF3O95398 923 aa13.92□□□□□ -0.18
KDM5C-209ENST00000465402 PCGF6Q9BYE7 350 aa13.91□□□□□ -0.18
KDM5C-209ENST00000465402 FRMPD1Q5SYB0 1578 aa13.91□□□□□ -0.18
KDM5C-209ENST00000465402 TIAM1Q13009 1591 aa13.9□□□□□ -0.18
KDM5C-209ENST00000465402 TTC37Q6PGP7 1564 aa13.9□□□□□ -0.18
KDM5C-209ENST00000465402 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.9□□□□□ -0.19
KDM5C-209ENST00000465402 PLEKHD1A6NEE1 506 aa13.89□□□□□ -0.19
KDM5C-209ENST00000465402 NEO1Q92859 1461 aa13.88□□□□□ -0.19
KDM5C-209ENST00000465402 PPARGC1BQ86YN6 1023 aaKnown RBP13.86□□□□□ -0.19
KDM5C-209ENST00000465402 CDK11AQ9UQ88 783 aaPredicted RBP13.86□□□□□ -0.19
KDM5C-209ENST00000465402 LRRIQ1Q96JM4 1722 aa13.86□□□□□ -0.19
KDM5C-209ENST00000465402 PPP6R1Q9UPN7 881 aa13.85□□□□□ -0.19
KDM5C-209ENST00000465402 MTUS2Q5JR59 1369 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms