RNA–Protein interactions for RNA: ENST00000465385.5

MMP11-206, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 3,823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-206ENST00000465385 CNGB1Q14028 1251 aaPredicted RBP19.06■□□□□ 0.64
MMP11-206ENST00000465385 ERICH3Q5RHP9 1530 aa19.05■□□□□ 0.64
MMP11-206ENST00000465385 CUX2O14529 1486 aa19.05■□□□□ 0.64
MMP11-206ENST00000465385 HNRNPUQ00839 825 aaKnown RBP eCLIP19.02■□□□□ 0.64
MMP11-206ENST00000465385 ERICH6Q7L0X2 663 aa19.02■□□□□ 0.64
MMP11-206ENST00000465385 TONSLQ96HA7 1378 aa19.02■□□□□ 0.64
MMP11-206ENST00000465385 RBM19Q9Y4C8 960 aaKnown RBP19.02■□□□□ 0.63
MMP11-206ENST00000465385 CUX1P39880 1505 aa19.01■□□□□ 0.63
MMP11-206ENST00000465385 PHLDB1Q86UU1 1377 aa19.01■□□□□ 0.63
MMP11-206ENST00000465385 NCAPD3P42695 1498 aa19■□□□□ 0.63
MMP11-206ENST00000465385 WDR97A6NE52 1622 aa19■□□□□ 0.63
MMP11-206ENST00000465385 CARMIL1Q5VZK9 1371 aa18.97■□□□□ 0.63
MMP11-206ENST00000465385 MAPKBP1O60336 1514 aa18.95■□□□□ 0.62
MMP11-206ENST00000465385 PPP1R15AO75807 674 aaPredicted RBP18.94■□□□□ 0.62
MMP11-206ENST00000465385 IGF1RP08069 1367 aa18.91■□□□□ 0.62
MMP11-206ENST00000465385 BIVM-ERCC5R4GMW8 1640 aa18.91■□□□□ 0.62
MMP11-206ENST00000465385 CHIC2Q9UKJ5 165 aa18.9■□□□□ 0.62
MMP11-206ENST00000465385 ARID3CA6NKF2 412 aa18.9■□□□□ 0.62
MMP11-206ENST00000465385 BCL11AQ9H165 835 aa18.9■□□□□ 0.62
MMP11-206ENST00000465385 FHOD3Q2V2M9 1422 aa18.89■□□□□ 0.61
MMP11-206ENST00000465385 LRRC9Q6ZRR7 1453 aa18.88■□□□□ 0.61
MMP11-206ENST00000465385 CDK11AQ9UQ88 783 aaPredicted RBP18.87■□□□□ 0.61
MMP11-206ENST00000465385 POLR3GLQ9BT43 218 aa18.86■□□□□ 0.61
MMP11-206ENST00000465385 CCER2I3L3R5 266 aa18.85■□□□□ 0.61
MMP11-206ENST00000465385 TIAM1Q13009 1591 aa18.85■□□□□ 0.61
MMP11-206ENST00000465385 RRP7BPQ9NSQ0 103 aa18.85■□□□□ 0.61
MMP11-206ENST00000465385 FAM9BQ8IZU0 186 aa18.84■□□□□ 0.61
MMP11-206ENST00000465385 MTUS2Q5JR59 1369 aa18.84■□□□□ 0.61
MMP11-206ENST00000465385 CADPSQ9ULU8 1353 aa18.83■□□□□ 0.6
MMP11-206ENST00000465385 HMGXB3Q12766 1538 aa18.83■□□□□ 0.6
MMP11-206ENST00000465385 FHAD1B1AJZ9 1412 aa18.82■□□□□ 0.6
MMP11-206ENST00000465385 SENP3-EIF4A1A0A087X0R7 540 aa18.82■□□□□ 0.6
MMP11-206ENST00000465385 CC2D2AQ9P2K1 1620 aa18.81■□□□□ 0.6
MMP11-206ENST00000465385 DNAJC5BQ9UF47 199 aa18.79■□□□□ 0.6
MMP11-206ENST00000465385 TIMELESSQ9UNS1 1208 aa18.77■□□□□ 0.6
MMP11-206ENST00000465385 CFTRP13569 1480 aa18.76■□□□□ 0.59
MMP11-206ENST00000465385 FGD5Q6ZNL6 1462 aa18.75■□□□□ 0.59
MMP11-206ENST00000465385 FOXD1Q16676 465 aa18.73■□□□□ 0.59
MMP11-206ENST00000465385 HSPA5P11021 654 aaKnown RBP18.72■□□□□ 0.59
MMP11-206ENST00000465385 B4GALNT3Q6L9W6 998 aa18.71■□□□□ 0.59
MMP11-206ENST00000465385 MRS2Q9HD23 443 aa18.7■□□□□ 0.58
MMP11-206ENST00000465385 PCF11O94913 1555 aaKnown RBP18.7■□□□□ 0.58
MMP11-206ENST00000465385 MSH5O43196 834 aa18.7■□□□□ 0.58
MMP11-206ENST00000465385 CCDC18Q5T9S5 1454 aa18.7■□□□□ 0.58
MMP11-206ENST00000465385 ZNF326Q5BKZ1 582 aaKnown RBP18.68■□□□□ 0.58
MMP11-206ENST00000465385 NESP48681 1621 aa18.67■□□□□ 0.58
MMP11-206ENST00000465385 EIF4G2P78344 907 aaKnown RBP eCLIP18.67■□□□□ 0.58
MMP11-206ENST00000465385 CCDC184Q52MB2 194 aa18.66■□□□□ 0.58
MMP11-206ENST00000465385 RAD54L2Q9Y4B4 1467 aa18.66■□□□□ 0.58
MMP11-206ENST00000465385 FGD6Q6ZV73 1430 aa18.64■□□□□ 0.58
MMP11-206ENST00000465385 FANCD2Q9BXW9 1451 aa18.64■□□□□ 0.57
MMP11-206ENST00000465385 WASHC2AQ641Q2 1341 aa18.62■□□□□ 0.57
MMP11-206ENST00000465385 NBR1Q14596 966 aa18.6■□□□□ 0.57
MMP11-206ENST00000465385 MAP3K1Q13233 1512 aa18.58■□□□□ 0.57
MMP11-206ENST00000465385 PTPRKQ15262 1439 aa18.57■□□□□ 0.56
MMP11-206ENST00000465385 PPP4R2Q9NY27 417 aa18.57■□□□□ 0.56
MMP11-206ENST00000465385 UACAQ9BZF9 1416 aa18.57■□□□□ 0.56
MMP11-206ENST00000465385 TDRD9Q8NDG6 1382 aaKnown RBP18.56■□□□□ 0.56
MMP11-206ENST00000465385 L3MBTL2Q969R5 705 aa18.56■□□□□ 0.56
MMP11-206ENST00000465385 CASKIN1Q8WXD9 1431 aa18.54■□□□□ 0.56
MMP11-206ENST00000465385 FMN1Q68DA7 1419 aa18.54■□□□□ 0.56
MMP11-206ENST00000465385 FYCO1Q9BQS8 1478 aa18.53■□□□□ 0.56
MMP11-206ENST00000465385 AQRO60306 1485 aaKnown RBP eCLIP18.52■□□□□ 0.566e-9■■□□□ 14
MMP11-206ENST00000465385 HFM1A2PYH4 1435 aa18.5■□□□□ 0.55
MMP11-206ENST00000465385 C11orf95C9JLR9 678 aaPredicted RBP18.5■□□□□ 0.55
MMP11-206ENST00000465385 MPHOSPH9Q99550 1183 aa18.5■□□□□ 0.55
MMP11-206ENST00000465385 NAIPQ13075 1403 aa18.5■□□□□ 0.55
MMP11-206ENST00000465385 PRKRIP1Q9H875 184 aaPredicted RBP18.49■□□□□ 0.55
MMP11-206ENST00000465385 NCOA2Q15596 1464 aa18.48■□□□□ 0.55
MMP11-206ENST00000465385 FANCIQ9NVI1 1328 aa18.48■□□□□ 0.55
MMP11-206ENST00000465385 SALL2Q9Y467 1007 aaPredicted RBP18.47■□□□□ 0.55
MMP11-206ENST00000465385 SLC4A1APQ9BWU0 796 aaKnown RBP18.47■□□□□ 0.55
MMP11-206ENST00000465385 CFAP43Q8NDM7 1665 aa18.46■□□□□ 0.55
MMP11-206ENST00000465385 MYOM3Q5VTT5 1437 aa18.46■□□□□ 0.55
MMP11-206ENST00000465385 CCDC136Q96JN2 1154 aa18.46■□□□□ 0.55
MMP11-206ENST00000465385 PDS5BQ9NTI5 1447 aa18.45■□□□□ 0.54
MMP11-206ENST00000465385 FBLN2P98095 1184 aa18.45■□□□□ 0.54
MMP11-206ENST00000465385 ZNF777Q9ULD5 760 aaPredicted RBP18.44■□□□□ 0.54
MMP11-206ENST00000465385 NPM2Q86SE8 214 aaKnown RBP18.43■□□□□ 0.54
MMP11-206ENST00000465385 PTPN23Q9H3S7 1636 aa18.43■□□□□ 0.54
MMP11-206ENST00000465385 POLA1P09884 1462 aaPredicted RBP18.41■□□□□ 0.54
MMP11-206ENST00000465385 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.41■□□□□ 0.54
MMP11-206ENST00000465385 CNTLNQ9NXG0 1405 aa18.4■□□□□ 0.54
MMP11-206ENST00000465385 DEKP35659 375 aaKnown RBP18.4■□□□□ 0.54
MMP11-206ENST00000465385 NBPF8Q3BBV2 869 aa18.4■□□□□ 0.54
MMP11-206ENST00000465385 CCDC7Q96M83 1385 aa18.39■□□□□ 0.53
MMP11-206ENST00000465385 EFCAB5A4FU69 1503 aa18.38■□□□□ 0.53
MMP11-206ENST00000465385 NOP58Q9Y2X3 529 aaKnown RBP18.37■□□□□ 0.53
MMP11-206ENST00000465385 ANP32AP39687 249 aaKnown RBP18.36■□□□□ 0.53
MMP11-206ENST00000465385 KIF7Q2M1P5 1343 aa18.36■□□□□ 0.53
MMP11-206ENST00000465385 ZBED9Q6R2W3 1325 aa18.36■□□□□ 0.53
MMP11-206ENST00000465385 TOPBP1Q92547 1522 aa18.36■□□□□ 0.53
MMP11-206ENST00000465385 RTL5Q5HYW3 569 aaPredicted RBP18.35■□□□□ 0.53
MMP11-206ENST00000465385 TMC1Q8TDI8 760 aa18.35■□□□□ 0.53
MMP11-206ENST00000465385 ZNF644Q9H582 1327 aaPredicted RBP18.34■□□□□ 0.53
MMP11-206ENST00000465385 PAK3O75914 559 aaPredicted RBP18.33■□□□□ 0.53
MMP11-206ENST00000465385 KDM2AQ9Y2K7 1162 aa18.33■□□□□ 0.53
MMP11-206ENST00000465385 AKNAQ7Z591 1439 aa18.33■□□□□ 0.53
MMP11-206ENST00000465385 ERICH6BQ5W0A0 696 aa18.32■□□□□ 0.52
MMP11-206ENST00000465385 SNAPC4Q5SXM2 1469 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms