RNA–Protein interactions for RNA: ENST00000465352.1

ABCA4-203, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 1,048 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-203ENST00000465352 CUL7Q14999 1698 aa24.64■■□□□ 1.53
ABCA4-203ENST00000465352 RUSC2Q8N2Y8 1516 aa24.58■■□□□ 1.53
ABCA4-203ENST00000465352 CARMIL1Q5VZK9 1371 aa24.56■■□□□ 1.52
ABCA4-203ENST00000465352 KIAA0586Q9BVV6 1533 aa24.56■■□□□ 1.52
ABCA4-203ENST00000465352 NPM1P06748 294 aaKnown RBP eCLIP24.44■■□□□ 1.5
ABCA4-203ENST00000465352 CARMIL2Q6F5E8 1435 aa24.37■■□□□ 1.49
ABCA4-203ENST00000465352 RAPGEF2Q9Y4G8 1499 aa24.36■■□□□ 1.49
ABCA4-203ENST00000465352 IQGAP2Q13576 1575 aa24.33■■□□□ 1.48
ABCA4-203ENST00000465352 PTPRGP23470 1445 aa24.32■■□□□ 1.48
ABCA4-203ENST00000465352 TNIKQ9UKE5 1360 aa24.29■■□□□ 1.48
ABCA4-203ENST00000465352 TTBK1Q5TCY1 1321 aaPredicted RBP24.27■■□□□ 1.48
ABCA4-203ENST00000465352 ADCY10Q96PN6 1610 aa24.26■■□□□ 1.47
ABCA4-203ENST00000465352 MAPKBP1O60336 1514 aa24.24■■□□□ 1.47
ABCA4-203ENST00000465352 FAM69CQ0P6D2 419 aa24.23■■□□□ 1.47
ABCA4-203ENST00000465352 KIF13AQ9H1H9 1805 aa24.22■■□□□ 1.47
ABCA4-203ENST00000465352 ABCC10Q5T3U5 1492 aa24.21■■□□□ 1.47
ABCA4-203ENST00000465352 UGGT2Q9NYU1 1516 aa24.18■■□□□ 1.46
ABCA4-203ENST00000465352 DISP1Q96F81 1524 aa24.16■■□□□ 1.46
ABCA4-203ENST00000465352 UACAQ9BZF9 1416 aa24.12■■□□□ 1.45
ABCA4-203ENST00000465352 ABCC2Q92887 1545 aa24.12■■□□□ 1.45
ABCA4-203ENST00000465352 PRXQ9BXM0 1461 aa24.12■■□□□ 1.45
ABCA4-203ENST00000465352 UHRF1BP1LA0JNW5 1464 aa24.11■■□□□ 1.45
ABCA4-203ENST00000465352 DIP2BQ9P265 1576 aa24.11■■□□□ 1.45
ABCA4-203ENST00000465352 CTTNBP2Q8WZ74 1663 aa24.1■■□□□ 1.45
ABCA4-203ENST00000465352 KIAA0556O60303 1618 aa24.08■■□□□ 1.45
ABCA4-203ENST00000465352 GOLGA3Q08378 1498 aa24.07■■□□□ 1.44
ABCA4-203ENST00000465352 CSRNP3Q8WYN3 585 aa24.07■■□□□ 1.44
ABCA4-203ENST00000465352 PLB1Q6P1J6 1458 aa24.05■■□□□ 1.44
ABCA4-203ENST00000465352 FAM9AQ8IZU1 332 aaPredicted RBP24.02■■□□□ 1.44
ABCA4-203ENST00000465352 ASXL2Q76L83 1435 aa24.01■■□□□ 1.43
ABCA4-203ENST00000465352 EEA1Q15075 1411 aa24.01■■□□□ 1.43
ABCA4-203ENST00000465352 AEBP2Q6ZN18 517 aaPredicted RBP24■■□□□ 1.43
ABCA4-203ENST00000465352 KDM5BQ9UGL1 1544 aa23.98■■□□□ 1.43
ABCA4-203ENST00000465352 TSPOAP1O95153 1857 aa23.96■■□□□ 1.43
ABCA4-203ENST00000465352 GLI2P10070 1586 aa23.91■■□□□ 1.42
ABCA4-203ENST00000465352 ZCCHC11Q5TAX3 1644 aaKnown RBP23.9■■□□□ 1.42
ABCA4-203ENST00000465352 KDM6BO15054 1643 aa23.88■■□□□ 1.41
ABCA4-203ENST00000465352 EPRSP07814 1512 aaKnown RBP23.86■■□□□ 1.41
ABCA4-203ENST00000465352 P3H3Q8IVL6 736 aa23.85■■□□□ 1.41
ABCA4-203ENST00000465352 ABCA8O94911 1581 aa23.85■■□□□ 1.41
ABCA4-203ENST00000465352 WDR7Q9Y4E6 1490 aa23.82■■□□□ 1.4
ABCA4-203ENST00000465352 TEX14Q8IWB6 1497 aa23.78■■□□□ 1.4
ABCA4-203ENST00000465352 CHIC1Q5VXU3 224 aa23.76■■□□□ 1.39
ABCA4-203ENST00000465352 MAP3K4Q9Y6R4 1608 aa23.76■■□□□ 1.39
ABCA4-203ENST00000465352 PPRC1Q5VV67 1664 aaKnown RBP23.76■■□□□ 1.39
ABCA4-203ENST00000465352 SAMD9Q5K651 1589 aa23.75■■□□□ 1.39
ABCA4-203ENST00000465352 KCNH8Q96L42 1107 aa23.75■■□□□ 1.39
ABCA4-203ENST00000465352 RANGAP1P46060 587 aaPredicted RBP23.73■■□□□ 1.39
ABCA4-203ENST00000465352 KIF21BO75037 1637 aa23.72■■□□□ 1.39
ABCA4-203ENST00000465352 ARID3CA6NKF2 412 aa23.69■■□□□ 1.38
ABCA4-203ENST00000465352 CD109Q6YHK3 1445 aa23.68■■□□□ 1.38
ABCA4-203ENST00000465352 ATP10BO94823 1461 aa23.68■■□□□ 1.38
ABCA4-203ENST00000465352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.66■■□□□ 1.38
ABCA4-203ENST00000465352 HNRNPUL2Q1KMD3 747 aaKnown RBP23.66■■□□□ 1.38
ABCA4-203ENST00000465352 CFAP43Q8NDM7 1665 aa23.66■■□□□ 1.38
ABCA4-203ENST00000465352 RAPGEF6Q8TEU7 1601 aa23.65■■□□□ 1.38
ABCA4-203ENST00000465352 UBTFP17480 764 aaKnown RBP23.64■■□□□ 1.37
ABCA4-203ENST00000465352 MAGI3Q5TCQ9 1506 aa23.64■■□□□ 1.37
ABCA4-203ENST00000465352 FHOD3Q2V2M9 1422 aa23.63■■□□□ 1.37
ABCA4-203ENST00000465352 EFCAB5A4FU69 1503 aa23.61■■□□□ 1.37
ABCA4-203ENST00000465352 COL17A1Q9UMD9 1497 aaPredicted RBP23.6■■□□□ 1.37
ABCA4-203ENST00000465352 EHMT2Q96KQ7 1210 aa23.57■■□□□ 1.36
ABCA4-203ENST00000465352 NUP153P49790 1475 aaKnown RBP23.55■■□□□ 1.36
ABCA4-203ENST00000465352 KDM4FA0A1W2PPD8 638 aa23.54■■□□□ 1.36
ABCA4-203ENST00000465352 PLEKHD1A6NEE1 506 aa23.53■■□□□ 1.36
ABCA4-203ENST00000465352 ABCA9Q8IUA7 1624 aa23.5■■□□□ 1.35
ABCA4-203ENST00000465352 PHLDB1Q86UU1 1377 aa23.5■■□□□ 1.35
ABCA4-203ENST00000465352 ARAP3Q8WWN8 1544 aa23.44■■□□□ 1.34
ABCA4-203ENST00000465352 FMN1Q68DA7 1419 aa23.44■■□□□ 1.34
ABCA4-203ENST00000465352 ATP1B4Q9UN42 357 aaPredicted RBP23.42■■□□□ 1.34
ABCA4-203ENST00000465352 ADGRL1O94910 1474 aa23.41■■□□□ 1.34
ABCA4-203ENST00000465352 NEO1Q92859 1461 aa23.41■■□□□ 1.34
ABCA4-203ENST00000465352 ARHGAP35Q9NRY4 1499 aa23.39■■□□□ 1.34
ABCA4-203ENST00000465352 CDK11AQ9UQ88 783 aaPredicted RBP23.37■■□□□ 1.33
ABCA4-203ENST00000465352 HECW1Q76N89 1606 aa23.34■■□□□ 1.33
ABCA4-203ENST00000465352 CDK13Q14004 1512 aaKnown RBP23.33■■□□□ 1.33
ABCA4-203ENST00000465352 RAPGEF3O95398 923 aa23.31■■□□□ 1.32
ABCA4-203ENST00000465352 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.29■■□□□ 1.32
ABCA4-203ENST00000465352 CFAP74Q9C0B2 1584 aa23.27■■□□□ 1.32
ABCA4-203ENST00000465352 FANCAO15360 1455 aa23.27■■□□□ 1.32
ABCA4-203ENST00000465352 AKNAQ7Z591 1439 aa23.26■■□□□ 1.31
ABCA4-203ENST00000465352 DENND4BO75064 1496 aaPredicted RBP23.25■■□□□ 1.31
ABCA4-203ENST00000465352 TTC37Q6PGP7 1564 aa23.23■■□□□ 1.31
ABCA4-203ENST00000465352 CLIP1P30622 1438 aa23.21■■□□□ 1.31
ABCA4-203ENST00000465352 PLCH2O75038 1416 aa23.2■■□□□ 1.3
ABCA4-203ENST00000465352 TROQ12816 1431 aaPredicted RBP23.18■■□□□ 1.3
ABCA4-203ENST00000465352 EFCAB2Q5VUJ9 269 aa23.18■■□□□ 1.3
ABCA4-203ENST00000465352 CASKIN1Q8WXD9 1431 aa23.17■■□□□ 1.3
ABCA4-203ENST00000465352 ARID4BQ4LE39 1312 aaPredicted RBP23.17■■□□□ 1.3
ABCA4-203ENST00000465352 FRMPD1Q5SYB0 1578 aa23.17■■□□□ 1.3
ABCA4-203ENST00000465352 CCDC18Q5T9S5 1454 aa23.15■■□□□ 1.3
ABCA4-203ENST00000465352 KIF14Q15058 1648 aa23.15■■□□□ 1.3
ABCA4-203ENST00000465352 RICTORQ6R327 1708 aa23.14■■□□□ 1.3
ABCA4-203ENST00000465352 MYO5CQ9NQX4 1742 aa23.13■■□□□ 1.29
ABCA4-203ENST00000465352 SCAPERQ9BY12 1400 aa23.12■■□□□ 1.29
ABCA4-203ENST00000465352 PCF11O94913 1555 aaKnown RBP23.1■■□□□ 1.29
ABCA4-203ENST00000465352 ARHGEF40Q8TER5 1519 aa23.09■■□□□ 1.29
ABCA4-203ENST00000465352 LRRIQ1Q96JM4 1722 aa23.09■■□□□ 1.29
ABCA4-203ENST00000465352 MAGI2Q86UL8 1455 aa23.09■■□□□ 1.29
ABCA4-203ENST00000465352 FYCO1Q9BQS8 1478 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms