RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 CARMIL1Q5VZK9 1371 aa20.72■□□□□ 0.91
XRN1-204ENST00000465074 TRHP20396 242 aaPredicted RBP20.71■□□□□ 0.91
XRN1-204ENST00000465074 JPH4Q96JJ6 628 aa20.71■□□□□ 0.91
XRN1-204ENST00000465074 SHROOM2Q13796 1616 aa20.71■□□□□ 0.91
XRN1-204ENST00000465074 RUSC2Q8N2Y8 1516 aa20.7■□□□□ 0.9
XRN1-204ENST00000465074 PRG4Q92954 1404 aaPredicted RBP20.69■□□□□ 0.9
XRN1-204ENST00000465074 PHF23Q9BUL5 403 aaPredicted RBP20.65■□□□□ 0.9
XRN1-204ENST00000465074 KIAA0586Q9BVV6 1533 aa20.61■□□□□ 0.89
XRN1-204ENST00000465074 TTBK1Q5TCY1 1321 aaPredicted RBP20.58■□□□□ 0.89
XRN1-204ENST00000465074 RAPGEF2Q9Y4G8 1499 aa20.56■□□□□ 0.88
XRN1-204ENST00000465074 IQGAP2Q13576 1575 aa20.51■□□□□ 0.87
XRN1-204ENST00000465074 FAM9AQ8IZU1 332 aaPredicted RBP20.46■□□□□ 0.87
XRN1-204ENST00000465074 CARMIL2Q6F5E8 1435 aa20.44■□□□□ 0.86
XRN1-204ENST00000465074 NPM1P06748 294 aaKnown RBP eCLIP20.44■□□□□ 0.86
XRN1-204ENST00000465074 CTTNBP2Q8WZ74 1663 aa20.42■□□□□ 0.86
XRN1-204ENST00000465074 CSRNP3Q8WYN3 585 aa20.41■□□□□ 0.86
XRN1-204ENST00000465074 PTPRGP23470 1445 aa20.41■□□□□ 0.86
XRN1-204ENST00000465074 PRXQ9BXM0 1461 aa20.38■□□□□ 0.85
XRN1-204ENST00000465074 ADCY10Q96PN6 1610 aa20.38■□□□□ 0.85
XRN1-204ENST00000465074 TNIKQ9UKE5 1360 aa20.37■□□□□ 0.85
XRN1-204ENST00000465074 DISP1Q96F81 1524 aa20.34■□□□□ 0.85
XRN1-204ENST00000465074 UGGT2Q9NYU1 1516 aa20.33■□□□□ 0.85
XRN1-204ENST00000465074 EHMT2Q96KQ7 1210 aa20.31■□□□□ 0.84
XRN1-204ENST00000465074 EEA1Q15075 1411 aa20.3■□□□□ 0.84
XRN1-204ENST00000465074 KIAA0556O60303 1618 aa20.3■□□□□ 0.84
XRN1-204ENST00000465074 RANGAP1P46060 587 aaPredicted RBP20.29■□□□□ 0.84
XRN1-204ENST00000465074 KIF13AQ9H1H9 1805 aa20.27■□□□□ 0.84
XRN1-204ENST00000465074 P3H3Q8IVL6 736 aa20.26■□□□□ 0.83
XRN1-204ENST00000465074 FAM69CQ0P6D2 419 aa20.25■□□□□ 0.83
XRN1-204ENST00000465074 GOLGA3Q08378 1498 aa20.24■□□□□ 0.83
XRN1-204ENST00000465074 UACAQ9BZF9 1416 aa20.23■□□□□ 0.83
XRN1-204ENST00000465074 MAPKBP1O60336 1514 aa20.22■□□□□ 0.83
XRN1-204ENST00000465074 ABCC2Q92887 1545 aa20.2■□□□□ 0.82
XRN1-204ENST00000465074 ABCC10Q5T3U5 1492 aa20.18■□□□□ 0.82
XRN1-204ENST00000465074 UHRF1BP1LA0JNW5 1464 aa20.17■□□□□ 0.82
XRN1-204ENST00000465074 DIP2BQ9P265 1576 aa20.16■□□□□ 0.82
XRN1-204ENST00000465074 TSPOAP1O95153 1857 aa20.16■□□□□ 0.82
XRN1-204ENST00000465074 PLB1Q6P1J6 1458 aa20.15■□□□□ 0.82
XRN1-204ENST00000465074 KIF21BO75037 1637 aa20.14■□□□□ 0.81
XRN1-204ENST00000465074 UBTFP17480 764 aaKnown RBP20.14■□□□□ 0.81
XRN1-204ENST00000465074 ZCCHC11Q5TAX3 1644 aaKnown RBP20.13■□□□□ 0.81
XRN1-204ENST00000465074 ASXL2Q76L83 1435 aa20.13■□□□□ 0.81
XRN1-204ENST00000465074 ARID3CA6NKF2 412 aa20.12■□□□□ 0.81
XRN1-204ENST00000465074 KDM5BQ9UGL1 1544 aa20.09■□□□□ 0.81
XRN1-204ENST00000465074 ABCA8O94911 1581 aa20.07■□□□□ 0.8
XRN1-204ENST00000465074 SAMD9Q5K651 1589 aa20.07■□□□□ 0.8
XRN1-204ENST00000465074 KCNH8Q96L42 1107 aa20.03■□□□□ 0.8
XRN1-204ENST00000465074 FHOD3Q2V2M9 1422 aa20.02■□□□□ 0.79
XRN1-204ENST00000465074 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.01■□□□□ 0.79
XRN1-204ENST00000465074 HNRNPUL2Q1KMD3 747 aaKnown RBP20.01■□□□□ 0.79
XRN1-204ENST00000465074 EPRSP07814 1512 aaKnown RBP19.99■□□□□ 0.79
XRN1-204ENST00000465074 WDR7Q9Y4E6 1490 aa19.98■□□□□ 0.79
XRN1-204ENST00000465074 RAPGEF6Q8TEU7 1601 aa19.98■□□□□ 0.79
XRN1-204ENST00000465074 GLI2P10070 1586 aa19.97■□□□□ 0.79
XRN1-204ENST00000465074 EFCAB5A4FU69 1503 aa19.95■□□□□ 0.78
XRN1-204ENST00000465074 KDM6BO15054 1643 aa19.94■□□□□ 0.78
XRN1-204ENST00000465074 ATP10BO94823 1461 aa19.93■□□□□ 0.78
XRN1-204ENST00000465074 ATP1B4Q9UN42 357 aaPredicted RBP19.93■□□□□ 0.78
XRN1-204ENST00000465074 MAP3K4Q9Y6R4 1608 aa19.91■□□□□ 0.78
XRN1-204ENST00000465074 PPRC1Q5VV67 1664 aaKnown RBP19.91■□□□□ 0.78
XRN1-204ENST00000465074 NUP153P49790 1475 aaKnown RBP19.86■□□□□ 0.77
XRN1-204ENST00000465074 CD109Q6YHK3 1445 aa19.85■□□□□ 0.77
XRN1-204ENST00000465074 ARHGAP35Q9NRY4 1499 aa19.85■□□□□ 0.77
XRN1-204ENST00000465074 TEX14Q8IWB6 1497 aa19.84■□□□□ 0.77
XRN1-204ENST00000465074 CFAP43Q8NDM7 1665 aa19.84■□□□□ 0.77
XRN1-204ENST00000465074 PLEKHD1A6NEE1 506 aa19.8■□□□□ 0.76
XRN1-204ENST00000465074 FMN1Q68DA7 1419 aa19.78■□□□□ 0.76
XRN1-204ENST00000465074 CDK13Q14004 1512 aaKnown RBP19.77■□□□□ 0.76
XRN1-204ENST00000465074 COL17A1Q9UMD9 1497 aaPredicted RBP19.74■□□□□ 0.75
XRN1-204ENST00000465074 HECW1Q76N89 1606 aa19.74■□□□□ 0.75
XRN1-204ENST00000465074 ABCA9Q8IUA7 1624 aa19.74■□□□□ 0.75
XRN1-204ENST00000465074 MAGI3Q5TCQ9 1506 aa19.74■□□□□ 0.75
XRN1-204ENST00000465074 CLIP1P30622 1438 aa19.7■□□□□ 0.74
XRN1-204ENST00000465074 CDK11AQ9UQ88 783 aaPredicted RBP19.66■□□□□ 0.74
XRN1-204ENST00000465074 LRRIQ1Q96JM4 1722 aa19.65■□□□□ 0.74
XRN1-204ENST00000465074 PCF11O94913 1555 aaKnown RBP19.65■□□□□ 0.74
XRN1-204ENST00000465074 LOC105371045A0A1W2PR82 267 aa19.64■□□□□ 0.73
XRN1-204ENST00000465074 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.64■□□□□ 0.73
XRN1-204ENST00000465074 FOXD1Q16676 465 aa19.63■□□□□ 0.73
XRN1-204ENST00000465074 TTC37Q6PGP7 1564 aa19.62■□□□□ 0.73
XRN1-204ENST00000465074 CASKIN1Q8WXD9 1431 aa19.6■□□□□ 0.73
XRN1-204ENST00000465074 RAPGEF3O95398 923 aa19.6■□□□□ 0.73
XRN1-204ENST00000465074 ARAP3Q8WWN8 1544 aa19.58■□□□□ 0.73
XRN1-204ENST00000465074 NEO1Q92859 1461 aa19.58■□□□□ 0.72
XRN1-204ENST00000465074 PHLDB1Q86UU1 1377 aa19.57■□□□□ 0.72
XRN1-204ENST00000465074 KDM4FA0A1W2PPD8 638 aa19.57■□□□□ 0.72
XRN1-204ENST00000465074 KIF14Q15058 1648 aa19.57■□□□□ 0.72
XRN1-204ENST00000465074 FANCAO15360 1455 aa19.56■□□□□ 0.72
XRN1-204ENST00000465074 CEP162Q5TB80 1403 aa19.56■□□□□ 0.72
XRN1-204ENST00000465074 TROQ12816 1431 aaPredicted RBP19.55■□□□□ 0.72
XRN1-204ENST00000465074 CCDC18Q5T9S5 1454 aa19.54■□□□□ 0.72
XRN1-204ENST00000465074 FYCO1Q9BQS8 1478 aa19.54■□□□□ 0.72
XRN1-204ENST00000465074 MYO5CQ9NQX4 1742 aa19.54■□□□□ 0.72
XRN1-204ENST00000465074 CFAP74Q9C0B2 1584 aa19.54■□□□□ 0.72
XRN1-204ENST00000465074 AKNAQ7Z591 1439 aa19.53■□□□□ 0.72
XRN1-204ENST00000465074 ADGRL1O94910 1474 aa19.51■□□□□ 0.71
XRN1-204ENST00000465074 PLCH2O75038 1416 aa19.5■□□□□ 0.71
XRN1-204ENST00000465074 DENND4BO75064 1496 aaPredicted RBP19.49■□□□□ 0.71
XRN1-204ENST00000465074 EFCAB2Q5VUJ9 269 aa19.49■□□□□ 0.71
XRN1-204ENST00000465074 ARHGAP5Q13017 1502 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms