RNA–Protein interactions for RNA: ENST00000464969.6

NOLC1-204, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

TSL 2

Gene NOLC1, Length 2,288 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-204ENST00000464969 NUP160Q12769 1436 aa18.76■□□□□ 0.59
NOLC1-204ENST00000464969 RANGAP1P46060 587 aaPredicted RBP18.73■□□□□ 0.59
NOLC1-204ENST00000464969 CLASP1Q7Z460 1538 aa18.68■□□□□ 0.58
NOLC1-204ENST00000464969 KIAA0586Q9BVV6 1533 aa18.68■□□□□ 0.58
NOLC1-204ENST00000464969 CTTNBP2Q8WZ74 1663 aa18.66■□□□□ 0.58
NOLC1-204ENST00000464969 IQGAP2Q13576 1575 aa18.64■□□□□ 0.57
NOLC1-204ENST00000464969 JPH4Q96JJ6 628 aa18.63■□□□□ 0.57
NOLC1-204ENST00000464969 TNIKQ9UKE5 1360 aa18.6■□□□□ 0.57
NOLC1-204ENST00000464969 PRG4Q92954 1404 aaPredicted RBP18.57■□□□□ 0.56
NOLC1-204ENST00000464969 P3H3Q8IVL6 736 aa18.57■□□□□ 0.56
NOLC1-204ENST00000464969 ERCC6L2Q5T890 1561 aa18.57■□□□□ 0.56
NOLC1-204ENST00000464969 SHROOM2Q13796 1616 aa18.55■□□□□ 0.56
NOLC1-204ENST00000464969 TTBK1Q5TCY1 1321 aaPredicted RBP18.55■□□□□ 0.56
NOLC1-204ENST00000464969 UGGT2Q9NYU1 1516 aa18.53■□□□□ 0.56
NOLC1-204ENST00000464969 DISP1Q96F81 1524 aa18.51■□□□□ 0.55
NOLC1-204ENST00000464969 ARHGEF11O15085 1522 aa18.49■□□□□ 0.55
NOLC1-204ENST00000464969 CEP162Q5TB80 1403 aa18.49■□□□□ 0.55
NOLC1-204ENST00000464969 DNAJC5Q9H3Z4 198 aa18.49■□□□□ 0.55
NOLC1-204ENST00000464969 CLIP1P30622 1438 aa18.47■□□□□ 0.55
NOLC1-204ENST00000464969 KIAA0556O60303 1618 aa18.47■□□□□ 0.55
NOLC1-204ENST00000464969 CARMIL2Q6F5E8 1435 aa18.47■□□□□ 0.55
NOLC1-204ENST00000464969 ARHGAP35Q9NRY4 1499 aa18.46■□□□□ 0.55
NOLC1-204ENST00000464969 RIMBP3CA6NJZ7 1639 aa18.46■□□□□ 0.54
NOLC1-204ENST00000464969 RIMBP3BA6NNM3 1639 aa18.46■□□□□ 0.54
NOLC1-204ENST00000464969 RIMBP3Q9UFD9 1639 aa18.46■□□□□ 0.54
NOLC1-204ENST00000464969 FHOD3Q2V2M9 1422 aa18.45■□□□□ 0.54
NOLC1-204ENST00000464969 SAMD9Q5K651 1589 aa18.45■□□□□ 0.54
NOLC1-204ENST00000464969 EFCAB5A4FU69 1503 aa18.41■□□□□ 0.54
NOLC1-204ENST00000464969 ARAP1Q96P48 1450 aa18.39■□□□□ 0.53
NOLC1-204ENST00000464969 CYB5RLQ6IPT4 315 aa18.38■□□□□ 0.53
NOLC1-204ENST00000464969 PTPRGP23470 1445 aa18.38■□□□□ 0.53
NOLC1-204ENST00000464969 PLB1Q6P1J6 1458 aa18.31■□□□□ 0.52
NOLC1-204ENST00000464969 ARID3CA6NKF2 412 aa18.3■□□□□ 0.52
NOLC1-204ENST00000464969 ATP1B4Q9UN42 357 aaPredicted RBP18.29■□□□□ 0.52
NOLC1-204ENST00000464969 FMN1Q68DA7 1419 aa18.26■□□□□ 0.51
NOLC1-204ENST00000464969 UACAQ9BZF9 1416 aa18.25■□□□□ 0.51
NOLC1-204ENST00000464969 ABCA8O94911 1581 aa18.23■□□□□ 0.51
NOLC1-204ENST00000464969 PCF11O94913 1555 aaKnown RBP18.22■□□□□ 0.51
NOLC1-204ENST00000464969 RAPGEF6Q8TEU7 1601 aa18.21■□□□□ 0.51
NOLC1-204ENST00000464969 ADCY10Q96PN6 1610 aa18.21■□□□□ 0.51
NOLC1-204ENST00000464969 VPS8Q8N3P4 1428 aa18.21■□□□□ 0.51
NOLC1-204ENST00000464969 ABCC2Q92887 1545 aa18.19■□□□□ 0.5
NOLC1-204ENST00000464969 NUP153P49790 1475 aaKnown RBP18.18■□□□□ 0.5
NOLC1-204ENST00000464969 CASKIN1Q8WXD9 1431 aa18.17■□□□□ 0.5
NOLC1-204ENST00000464969 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.16■□□□□ 0.5
NOLC1-204ENST00000464969 HNRNPUL2Q1KMD3 747 aaKnown RBP18.16■□□□□ 0.5
NOLC1-204ENST00000464969 UHRF1BP1LA0JNW5 1464 aa18.15■□□□□ 0.5
NOLC1-204ENST00000464969 CDK13Q14004 1512 aaKnown RBP18.14■□□□□ 0.49
NOLC1-204ENST00000464969 FYCO1Q9BQS8 1478 aa18.14■□□□□ 0.49
NOLC1-204ENST00000464969 HECW1Q76N89 1606 aa18.13■□□□□ 0.49
NOLC1-204ENST00000464969 LRRIQ1Q96JM4 1722 aa18.12■□□□□ 0.49
NOLC1-204ENST00000464969 NPM1P06748 294 aaKnown RBP eCLIP18.12■□□□□ 0.49
NOLC1-204ENST00000464969 ATP10BO94823 1461 aa18.12■□□□□ 0.49
NOLC1-204ENST00000464969 EPRSP07814 1512 aaKnown RBP18.11■□□□□ 0.49
NOLC1-204ENST00000464969 ZCCHC11Q5TAX3 1644 aaKnown RBP18.1■□□□□ 0.49
NOLC1-204ENST00000464969 KDM5BQ9UGL1 1544 aa18.1■□□□□ 0.49
NOLC1-204ENST00000464969 PPARGC1BQ86YN6 1023 aaKnown RBP18.04■□□□□ 0.48
NOLC1-204ENST00000464969 CCDC18Q5T9S5 1454 aa18.03■□□□□ 0.48
NOLC1-204ENST00000464969 APLP2Q06481 763 aa18.03■□□□□ 0.48
NOLC1-204ENST00000464969 ASXL2Q76L83 1435 aa18.02■□□□□ 0.47
NOLC1-204ENST00000464969 KANK4Q5T7N3 995 aaPredicted RBP18.01■□□□□ 0.47
NOLC1-204ENST00000464969 KCNH8Q96L42 1107 aa18.01■□□□□ 0.47
NOLC1-204ENST00000464969 MAGI3Q5TCQ9 1506 aa18■□□□□ 0.47
NOLC1-204ENST00000464969 PLEKHD1A6NEE1 506 aa18■□□□□ 0.47
NOLC1-204ENST00000464969 TIAM1Q13009 1591 aa18■□□□□ 0.47
NOLC1-204ENST00000464969 CFAP43Q8NDM7 1665 aa17.98■□□□□ 0.47
NOLC1-204ENST00000464969 CDK11AQ9UQ88 783 aaPredicted RBP17.97■□□□□ 0.47
NOLC1-204ENST00000464969 MAPKBP1O60336 1514 aa17.96■□□□□ 0.47
NOLC1-204ENST00000464969 WDR7Q9Y4E6 1490 aa17.96■□□□□ 0.47
NOLC1-204ENST00000464969 MTUS2Q5JR59 1369 aa17.96■□□□□ 0.47
NOLC1-204ENST00000464969 LRRC9Q6ZRR7 1453 aa17.93■□□□□ 0.46
NOLC1-204ENST00000464969 TROQ12816 1431 aaPredicted RBP17.93■□□□□ 0.46
NOLC1-204ENST00000464969 MAP3K1Q13233 1512 aa17.92■□□□□ 0.46
NOLC1-204ENST00000464969 KIF14Q15058 1648 aa17.9■□□□□ 0.46
NOLC1-204ENST00000464969 TRHP20396 242 aaPredicted RBP17.89■□□□□ 0.46
NOLC1-204ENST00000464969 FAM69CQ0P6D2 419 aa17.89■□□□□ 0.46
NOLC1-204ENST00000464969 EHBP1L1Q8N3D4 1523 aa17.89■□□□□ 0.45
NOLC1-204ENST00000464969 ABCC10Q5T3U5 1492 aa17.87■□□□□ 0.45
NOLC1-204ENST00000464969 DIP2BQ9P265 1576 aa17.86■□□□□ 0.45
NOLC1-204ENST00000464969 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.84■□□□□ 0.45
NOLC1-204ENST00000464969 TTC37Q6PGP7 1564 aa17.83■□□□□ 0.45
NOLC1-204ENST00000464969 NCOA2Q15596 1464 aa17.83■□□□□ 0.44
NOLC1-204ENST00000464969 KIF13AQ9H1H9 1805 aa17.82■□□□□ 0.44
NOLC1-204ENST00000464969 SUPT6HQ7KZ85 1726 aaKnown RBP17.81■□□□□ 0.44
NOLC1-204ENST00000464969 ABCA9Q8IUA7 1624 aa17.79■□□□□ 0.44
NOLC1-204ENST00000464969 CD109Q6YHK3 1445 aa17.78■□□□□ 0.44
NOLC1-204ENST00000464969 GLI2P10070 1586 aa17.78■□□□□ 0.44
NOLC1-204ENST00000464969 PHLDB1Q86UU1 1377 aa17.78■□□□□ 0.44
NOLC1-204ENST00000464969 CCNB3Q8WWL7 1395 aa17.77■□□□□ 0.44
NOLC1-204ENST00000464969 TSPOAP1O95153 1857 aa17.76■□□□□ 0.43
NOLC1-204ENST00000464969 MAP3K4Q9Y6R4 1608 aa17.75■□□□□ 0.43
NOLC1-204ENST00000464969 GPATCH8Q9UKJ3 1502 aaKnown RBP17.74■□□□□ 0.43
NOLC1-204ENST00000464969 ZNF777Q9ULD5 760 aaPredicted RBP17.74■□□□□ 0.43
NOLC1-204ENST00000464969 CDC42BPAQ5VT25 1732 aa17.73■□□□□ 0.43
NOLC1-204ENST00000464969 MYO5CQ9NQX4 1742 aa17.72■□□□□ 0.43
NOLC1-204ENST00000464969 PLCH2O75038 1416 aa17.72■□□□□ 0.43
NOLC1-204ENST00000464969 CFDP1Q9UEE9 299 aaPredicted RBP17.72■□□□□ 0.43
NOLC1-204ENST00000464969 ARHGAP5Q13017 1502 aa17.71■□□□□ 0.43
NOLC1-204ENST00000464969 CDC42BPBQ9Y5S2 1711 aa17.7■□□□□ 0.42
NOLC1-204ENST00000464969 ZNF644Q9H582 1327 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms