RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 TOP2AP11388 1531 aaKnown RBP18.1■□□□□ 0.49
APP-213ENST00000464867 ZBTB22O15209 634 aa18.1■□□□□ 0.49
APP-213ENST00000464867 ZNF219Q9P2Y4 722 aaPredicted RBP18.1■□□□□ 0.49
APP-213ENST00000464867 ABCB7O75027 752 aa18.04■□□□□ 0.48
APP-213ENST00000464867 DNMBPQ6XZF7 1577 aa18.04■□□□□ 0.48
APP-213ENST00000464867 TARBP1Q13395 1621 aaKnown RBP18.03■□□□□ 0.48
APP-213ENST00000464867 CHMP7Q8WUX9 453 aaPredicted RBP18.01■□□□□ 0.47
APP-213ENST00000464867 SYNJ1O43426 1573 aa18■□□□□ 0.47
APP-213ENST00000464867 CLASP1Q7Z460 1538 aa17.99■□□□□ 0.47
APP-213ENST00000464867 ILDR1Q86SU0 546 aaPredicted RBP17.95■□□□□ 0.46
APP-213ENST00000464867 GAPVD1Q14C86 1478 aa17.92■□□□□ 0.46
APP-213ENST00000464867 SNAPC4Q5SXM2 1469 aa17.92■□□□□ 0.46
APP-213ENST00000464867 TDRD9Q8NDG6 1382 aaKnown RBP17.91■□□□□ 0.46
APP-213ENST00000464867 POLA1P09884 1462 aaPredicted RBP17.91■□□□□ 0.46
APP-213ENST00000464867 CCDC88BA6NC98 1476 aa17.9■□□□□ 0.46
APP-213ENST00000464867 ATF5Q9Y2D1 282 aaPredicted RBP17.89■□□□□ 0.45
APP-213ENST00000464867 SOGA1O94964 1423 aa17.87■□□□□ 0.45
APP-213ENST00000464867 MAGI1Q96QZ7 1491 aaPredicted RBP17.87■□□□□ 0.45
APP-213ENST00000464867 RAD54L2Q9Y4B4 1467 aa17.86■□□□□ 0.45
APP-213ENST00000464867 WDR97A6NE52 1622 aa17.85■□□□□ 0.45
APP-213ENST00000464867 SYNJ2O15056 1496 aa17.82■□□□□ 0.44
APP-213ENST00000464867 GRIN2BQ13224 1484 aa17.79■□□□□ 0.44
APP-213ENST00000464867 POLA2Q14181 598 aa17.76■□□□□ 0.43
APP-213ENST00000464867 KIF13AQ9H1H9 1805 aa17.72■□□□□ 0.43
APP-213ENST00000464867 FGD5Q6ZNL6 1462 aa17.7■□□□□ 0.42
APP-213ENST00000464867 KDM4FA0A1W2PPD8 638 aa17.66■□□□□ 0.42
APP-213ENST00000464867 PBRM1Q86U86 1689 aa17.66■□□□□ 0.42
APP-213ENST00000464867 ERCC6L2Q5T890 1561 aa17.64■□□□□ 0.41
APP-213ENST00000464867 FAM69CQ0P6D2 419 aa17.62■□□□□ 0.41
APP-213ENST00000464867 CEP170Q5SW79 1584 aa17.58■□□□□ 0.41
APP-213ENST00000464867 NPM1P06748 294 aaKnown RBP eCLIP17.58■□□□□ 0.4
APP-213ENST00000464867 ATXN8OSP0DMR3 200 aa17.56■□□□□ 0.4
APP-213ENST00000464867 KDM6BO15054 1643 aa17.55■□□□□ 0.4
APP-213ENST00000464867 GRIN2AQ12879 1464 aa17.54■□□□□ 0.4
APP-213ENST00000464867 CUX1P39880 1505 aa17.53■□□□□ 0.4
APP-213ENST00000464867 ABCC10Q5T3U5 1492 aa17.53■□□□□ 0.4
APP-213ENST00000464867 SHROOM2Q13796 1616 aa17.5■□□□□ 0.39
APP-213ENST00000464867 NUP160Q12769 1436 aa17.48■□□□□ 0.39
APP-213ENST00000464867 ABCA5Q8WWZ7 1642 aa17.48■□□□□ 0.39
APP-213ENST00000464867 ABCA10Q8WWZ4 1543 aa17.46■□□□□ 0.39
APP-213ENST00000464867 CSRNP3Q8WYN3 585 aa17.45■□□□□ 0.38
APP-213ENST00000464867 TSPOAP1O95153 1857 aa17.44■□□□□ 0.38
APP-213ENST00000464867 MAPKBP1O60336 1514 aa17.44■□□□□ 0.38
APP-213ENST00000464867 DIP2BQ9P265 1576 aa17.44■□□□□ 0.38
APP-213ENST00000464867 PRG4Q92954 1404 aaPredicted RBP17.43■□□□□ 0.38
APP-213ENST00000464867 ADAMTS12P58397 1594 aa17.4■□□□□ 0.38
APP-213ENST00000464867 JPH4Q96JJ6 628 aa17.38■□□□□ 0.37
APP-213ENST00000464867 FHAD1B1AJZ9 1412 aa17.38■□□□□ 0.37
APP-213ENST00000464867 ADGRL1O94910 1474 aa17.37■□□□□ 0.37
APP-213ENST00000464867 HECW2Q9P2P5 1572 aa17.36■□□□□ 0.37
APP-213ENST00000464867 FBXO41Q8TF61 875 aa17.34■□□□□ 0.37
APP-213ENST00000464867 EHMT2Q96KQ7 1210 aa17.34■□□□□ 0.37
APP-213ENST00000464867 RBM42Q9BTD8 480 aaKnown RBP17.32■□□□□ 0.36
APP-213ENST00000464867 ZBTB12Q9Y330 459 aaPredicted RBP17.32■□□□□ 0.36
APP-213ENST00000464867 ADCY10Q96PN6 1610 aa17.29■□□□□ 0.36
APP-213ENST00000464867 WRNQ14191 1432 aaPredicted RBP eCLIP17.29■□□□□ 0.36
APP-213ENST00000464867 ERICH3Q5RHP9 1530 aa17.25■□□□□ 0.35
APP-213ENST00000464867 RUSC2Q8N2Y8 1516 aa17.18■□□□□ 0.34
APP-213ENST00000464867 TOP2BQ02880 1626 aa17.12■□□□□ 0.33
APP-213ENST00000464867 PPRC1Q5VV67 1664 aaKnown RBP17.12■□□□□ 0.33
APP-213ENST00000464867 GLI2P10070 1586 aa17.11■□□□□ 0.33
APP-213ENST00000464867 PLB1Q6P1J6 1458 aa17.11■□□□□ 0.33
APP-213ENST00000464867 LMTK3Q96Q04 1460 aa17.11■□□□□ 0.33
APP-213ENST00000464867 BIVM-ERCC5R4GMW8 1640 aa17.08■□□□□ 0.32
APP-213ENST00000464867 PTPRGP23470 1445 aa17.08■□□□□ 0.32
APP-213ENST00000464867 ASXL2Q76L83 1435 aa17.08■□□□□ 0.32
APP-213ENST00000464867 TTBK1Q5TCY1 1321 aaPredicted RBP17.08■□□□□ 0.32
APP-213ENST00000464867 POTEHQ6S545 545 aa17.08■□□□□ 0.32
APP-213ENST00000464867 TEX14Q8IWB6 1497 aa17.07■□□□□ 0.32
APP-213ENST00000464867 MKRN4PQ13434 485 aaPredicted RBP17.06■□□□□ 0.32
APP-213ENST00000464867 ABCC2Q92887 1545 aa17.06■□□□□ 0.32
APP-213ENST00000464867 KIAA0586Q9BVV6 1533 aa17.06■□□□□ 0.32
APP-213ENST00000464867 COL17A1Q9UMD9 1497 aaPredicted RBP17.05■□□□□ 0.32
APP-213ENST00000464867 AKT1S1Q96B36 256 aa17.02■□□□□ 0.32
APP-213ENST00000464867 CUL7Q14999 1698 aa17■□□□□ 0.31
APP-213ENST00000464867 MAP3K4Q9Y6R4 1608 aa16.99■□□□□ 0.31
APP-213ENST00000464867 CARMIL2Q6F5E8 1435 aa16.98■□□□□ 0.31
APP-213ENST00000464867 TNIKQ9UKE5 1360 aa16.97■□□□□ 0.31
APP-213ENST00000464867 SOCS7O14512 581 aa16.96■□□□□ 0.31
APP-213ENST00000464867 EPRSP07814 1512 aaKnown RBP16.96■□□□□ 0.3
APP-213ENST00000464867 UHRF1BP1LA0JNW5 1464 aa16.93■□□□□ 0.3
APP-213ENST00000464867 CHRDL2Q6WN34 429 aa16.92■□□□□ 0.3
APP-213ENST00000464867 UACAQ9BZF9 1416 aa16.9■□□□□ 0.3
APP-213ENST00000464867 REM2Q8IYK8 340 aaPredicted RBP16.9■□□□□ 0.3
APP-213ENST00000464867 DISP3Q9P2K9 1392 aa16.89■□□□□ 0.29
APP-213ENST00000464867 KIF21BO75037 1637 aa16.86■□□□□ 0.29
APP-213ENST00000464867 SPDYE2BA6NHP3 402 aa16.85■□□□□ 0.29
APP-213ENST00000464867 SPDYE6P0CI01 402 aa16.85■□□□□ 0.29
APP-213ENST00000464867 SPDYE2Q495Y8 402 aa16.85■□□□□ 0.29
APP-213ENST00000464867 KDM5BQ9UGL1 1544 aa16.85■□□□□ 0.29
APP-213ENST00000464867 ILDR2Q71H61 639 aa16.84■□□□□ 0.29
APP-213ENST00000464867 ZCCHC11Q5TAX3 1644 aaKnown RBP16.82■□□□□ 0.28
APP-213ENST00000464867 PTPRMP28827 1452 aa16.82■□□□□ 0.28
APP-213ENST00000464867 IGF1RP08069 1367 aa16.82■□□□□ 0.28
APP-213ENST00000464867 CD109Q6YHK3 1445 aa16.8■□□□□ 0.28
APP-213ENST00000464867 MAGI3Q5TCQ9 1506 aa16.79■□□□□ 0.28
APP-213ENST00000464867 WDR7Q9Y4E6 1490 aa16.79■□□□□ 0.28
APP-213ENST00000464867 KIF27Q86VH2 1401 aa16.79■□□□□ 0.28
APP-213ENST00000464867 PCF11O94913 1555 aaKnown RBP16.78■□□□□ 0.28
APP-213ENST00000464867 IQGAP2Q13576 1575 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms