RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 PRG4Q92954 1404 aaPredicted RBP44.61■■■■■ 4.73
U2AF1-206ENST00000464750 JPH4Q96JJ6 628 aa44.57■■■■■ 4.73
U2AF1-206ENST00000464750 CARMIL1Q5VZK9 1371 aa44.5■■■■■ 4.71
U2AF1-206ENST00000464750 KIAA0586Q9BVV6 1533 aa44.5■■■■■ 4.71
U2AF1-206ENST00000464750 IQGAP2Q13576 1575 aa44.21■■■■■ 4.67
U2AF1-206ENST00000464750 RAPGEF2Q9Y4G8 1499 aa44.2■■■■■ 4.67
U2AF1-206ENST00000464750 ADCY10Q96PN6 1610 aa44.11■■■■■ 4.65
U2AF1-206ENST00000464750 CARMIL2Q6F5E8 1435 aa44.04■■■■■ 4.64
U2AF1-206ENST00000464750 KIF13AQ9H1H9 1805 aa44■■■■■ 4.63
U2AF1-206ENST00000464750 PTPRGP23470 1445 aa43.97■■■■■ 4.63
U2AF1-206ENST00000464750 MAPKBP1O60336 1514 aa43.94■■■■■ 4.63
U2AF1-206ENST00000464750 TNIKQ9UKE5 1360 aa43.94■■■■■ 4.63
U2AF1-206ENST00000464750 CTTNBP2Q8WZ74 1663 aa43.94■■■■■ 4.62
U2AF1-206ENST00000464750 NPM1P06748 294 aaKnown RBP eCLIP43.93■■■■■ 4.62
U2AF1-206ENST00000464750 DISP1Q96F81 1524 aa43.92■■■■■ 4.62
U2AF1-206ENST00000464750 UGGT2Q9NYU1 1516 aa43.92■■■■■ 4.62
U2AF1-206ENST00000464750 TTBK1Q5TCY1 1321 aaPredicted RBP43.87■■■■■ 4.61
U2AF1-206ENST00000464750 PRXQ9BXM0 1461 aa43.87■■■■■ 4.61
U2AF1-206ENST00000464750 KIAA0556O60303 1618 aa43.82■■■■■ 4.61
U2AF1-206ENST00000464750 ABCC10Q5T3U5 1492 aa43.79■■■■■ 4.6
U2AF1-206ENST00000464750 DIP2BQ9P265 1576 aa43.77■■■■■ 4.6
U2AF1-206ENST00000464750 ABCC2Q92887 1545 aa43.72■■■■■ 4.59
U2AF1-206ENST00000464750 UHRF1BP1LA0JNW5 1464 aa43.69■■■■■ 4.58
U2AF1-206ENST00000464750 FAM69CQ0P6D2 419 aa43.68■■■■■ 4.58
U2AF1-206ENST00000464750 UACAQ9BZF9 1416 aa43.67■■■■■ 4.58
U2AF1-206ENST00000464750 GOLGA3Q08378 1498 aa43.59■■■■■ 4.57
U2AF1-206ENST00000464750 CSRNP3Q8WYN3 585 aa43.58■■■■■ 4.57
U2AF1-206ENST00000464750 EEA1Q15075 1411 aa43.57■■■■■ 4.57
U2AF1-206ENST00000464750 ASXL2Q76L83 1435 aa43.49■■■■■ 4.55
U2AF1-206ENST00000464750 KDM5BQ9UGL1 1544 aa43.48■■■■■ 4.55
U2AF1-206ENST00000464750 ZCCHC11Q5TAX3 1644 aaKnown RBP43.47■■■■■ 4.55
U2AF1-206ENST00000464750 TSPOAP1O95153 1857 aa43.47■■■■■ 4.55
U2AF1-206ENST00000464750 PLB1Q6P1J6 1458 aa43.46■■■■■ 4.55
U2AF1-206ENST00000464750 ABCA8O94911 1581 aa43.36■■■■■ 4.53
U2AF1-206ENST00000464750 GLI2P10070 1586 aa43.35■■■■■ 4.53
U2AF1-206ENST00000464750 FAM9AQ8IZU1 332 aaPredicted RBP43.32■■■■■ 4.53
U2AF1-206ENST00000464750 SAMD9Q5K651 1589 aa43.29■■■■■ 4.52
U2AF1-206ENST00000464750 KDM6BO15054 1643 aa43.26■■■■■ 4.52
U2AF1-206ENST00000464750 KIF21BO75037 1637 aa43.26■■■■■ 4.52
U2AF1-206ENST00000464750 EPRSP07814 1512 aaKnown RBP43.25■■■■■ 4.51
U2AF1-206ENST00000464750 PPRC1Q5VV67 1664 aaKnown RBP43.23■■■■■ 4.51
U2AF1-206ENST00000464750 CHIC1Q5VXU3 224 aa43.22■■■■■ 4.51
U2AF1-206ENST00000464750 P3H3Q8IVL6 736 aa43.19■■■■■ 4.5
U2AF1-206ENST00000464750 WDR7Q9Y4E6 1490 aa43.18■■■■■ 4.5
U2AF1-206ENST00000464750 MAP3K4Q9Y6R4 1608 aa43.17■■■■■ 4.5
U2AF1-206ENST00000464750 RAPGEF6Q8TEU7 1601 aa43.02■■■■■ 4.48
U2AF1-206ENST00000464750 RANGAP1P46060 587 aaPredicted RBP43.01■■■■■ 4.48
U2AF1-206ENST00000464750 TEX14Q8IWB6 1497 aa42.97■■■■■ 4.47
U2AF1-206ENST00000464750 FHOD3Q2V2M9 1422 aa42.97■■■■■ 4.47
U2AF1-206ENST00000464750 EFCAB5A4FU69 1503 aa42.94■■■■■ 4.46
U2AF1-206ENST00000464750 ARID3CA6NKF2 412 aa42.94■■■■■ 4.46
U2AF1-206ENST00000464750 AEBP2Q6ZN18 517 aaPredicted RBP42.94■■■■■ 4.46
U2AF1-206ENST00000464750 CFAP43Q8NDM7 1665 aa42.94■■■■■ 4.46
U2AF1-206ENST00000464750 ATP10BO94823 1461 aa42.94■■■■■ 4.46
U2AF1-206ENST00000464750 KCNH8Q96L42 1107 aa42.87■■■■■ 4.45
U2AF1-206ENST00000464750 EHMT2Q96KQ7 1210 aa42.84■■■■■ 4.45
U2AF1-206ENST00000464750 CD109Q6YHK3 1445 aa42.82■■■■■ 4.45
U2AF1-206ENST00000464750 NUP153P49790 1475 aaKnown RBP42.81■■■■■ 4.44
U2AF1-206ENST00000464750 MAGI3Q5TCQ9 1506 aa42.8■■■■■ 4.44
U2AF1-206ENST00000464750 COL17A1Q9UMD9 1497 aaPredicted RBP42.79■■■■■ 4.44
U2AF1-206ENST00000464750 UBTFP17480 764 aaKnown RBP42.78■■■■■ 4.44
U2AF1-206ENST00000464750 ABCA9Q8IUA7 1624 aa42.69■■■■■ 4.42
U2AF1-206ENST00000464750 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP42.68■■■■■ 4.42
U2AF1-206ENST00000464750 HNRNPUL2Q1KMD3 747 aaKnown RBP42.68■■■■■ 4.42
U2AF1-206ENST00000464750 ARHGAP35Q9NRY4 1499 aa42.59■■■■■ 4.41
U2AF1-206ENST00000464750 FMN1Q68DA7 1419 aa42.5■■■■■ 4.39
U2AF1-206ENST00000464750 CDK13Q14004 1512 aaKnown RBP42.47■■■■■ 4.39
U2AF1-206ENST00000464750 KDM4FA0A1W2PPD8 638 aa42.47■■■■■ 4.39
U2AF1-206ENST00000464750 HECW1Q76N89 1606 aa42.46■■■■■ 4.39
U2AF1-206ENST00000464750 PLEKHD1A6NEE1 506 aa42.44■■■■■ 4.38
U2AF1-206ENST00000464750 ARAP3Q8WWN8 1544 aa42.44■■■■■ 4.38
U2AF1-206ENST00000464750 NEO1Q92859 1461 aa42.37■■■■■ 4.37
U2AF1-206ENST00000464750 PHLDB1Q86UU1 1377 aa42.36■■■■■ 4.37
U2AF1-206ENST00000464750 ADGRL1O94910 1474 aa42.36■■■■■ 4.37
U2AF1-206ENST00000464750 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP42.34■■■■■ 4.379e-12■■■■■ 76.3
U2AF1-206ENST00000464750 TTC37Q6PGP7 1564 aa42.32■■■■■ 4.37
U2AF1-206ENST00000464750 ATP1B4Q9UN42 357 aaPredicted RBP42.3■■■■■ 4.36
U2AF1-206ENST00000464750 LRRIQ1Q96JM4 1722 aa42.24■■■■■ 4.35
U2AF1-206ENST00000464750 CFAP74Q9C0B2 1584 aa42.23■■■■■ 4.35
U2AF1-206ENST00000464750 FRMPD1Q5SYB0 1578 aa42.2■■■■■ 4.35
U2AF1-206ENST00000464750 PCF11O94913 1555 aaKnown RBP42.18■■■■■ 4.34
U2AF1-206ENST00000464750 FANCAO15360 1455 aa42.17■■■■■ 4.34
U2AF1-206ENST00000464750 RAPGEF3O95398 923 aa42.15■■■■■ 4.34
U2AF1-206ENST00000464750 AKNAQ7Z591 1439 aa42.12■■■■■ 4.33
U2AF1-206ENST00000464750 CDK11AQ9UQ88 783 aaPredicted RBP42.11■■■■■ 4.33
U2AF1-206ENST00000464750 CASKIN1Q8WXD9 1431 aa42.1■■■■■ 4.33
U2AF1-206ENST00000464750 KIF14Q15058 1648 aa42.09■■■■■ 4.33
U2AF1-206ENST00000464750 RICTORQ6R327 1708 aa42.09■■■■■ 4.33
U2AF1-206ENST00000464750 CLIP1P30622 1438 aa42.09■■■■■ 4.33
U2AF1-206ENST00000464750 MYO5CQ9NQX4 1742 aa42.08■■■■■ 4.33
U2AF1-206ENST00000464750 TROQ12816 1431 aaPredicted RBP42.07■■■■■ 4.33
U2AF1-206ENST00000464750 DENND4BO75064 1496 aaPredicted RBP42.06■■■■■ 4.32
U2AF1-206ENST00000464750 CCDC18Q5T9S5 1454 aa42.04■■■■■ 4.32
U2AF1-206ENST00000464750 PLCH2O75038 1416 aa42.03■■■■■ 4.32
U2AF1-206ENST00000464750 FYCO1Q9BQS8 1478 aa41.99■■■■■ 4.31
U2AF1-206ENST00000464750 ARHGEF40Q8TER5 1519 aa41.96■■■■■ 4.31
U2AF1-206ENST00000464750 ZMYM4Q5VZL5 1548 aa41.92■■■■■ 4.3
U2AF1-206ENST00000464750 SCAPERQ9BY12 1400 aa41.85■■■■■ 4.29
U2AF1-206ENST00000464750 ARHGAP5Q13017 1502 aa41.85■■■■■ 4.29
U2AF1-206ENST00000464750 POGZQ7Z3K3 1410 aa41.84■■■■■ 4.29
Retrieved 100 of 20,778 RNA–protein pairs in 1408.7 ms