RNA–Protein interactions for RNA: ENST00000464673.1

LINC01998-201, Transcript of long intergenic non-protein coding RNA 1998, humanhuman

TSL 1 (best) BASIC

Gene LINC01998, Length 1,967 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01998-201ENST00000464673 UBTFP17480 764 aaKnown RBP15.55■□□□□ 0.08
LINC01998-201ENST00000464673 NUP160Q12769 1436 aa15.49■□□□□ 0.07
LINC01998-201ENST00000464673 CEP170Q5SW79 1584 aa15.48■□□□□ 0.07
LINC01998-201ENST00000464673 OSCARQ8IYS5 282 aa15.47■□□□□ 0.07
LINC01998-201ENST00000464673 TNIKQ9UKE5 1360 aa15.46■□□□□ 0.06
LINC01998-201ENST00000464673 KIAA0586Q9BVV6 1533 aa15.44■□□□□ 0.06
LINC01998-201ENST00000464673 CTTNBP2Q8WZ74 1663 aa15.44■□□□□ 0.06
LINC01998-201ENST00000464673 RANGAP1P46060 587 aaPredicted RBP15.42■□□□□ 0.06
LINC01998-201ENST00000464673 IQGAP2Q13576 1575 aa15.4■□□□□ 0.06
LINC01998-201ENST00000464673 JPH4Q96JJ6 628 aa15.38■□□□□ 0.05
LINC01998-201ENST00000464673 CLASP1Q7Z460 1538 aa15.38■□□□□ 0.05
LINC01998-201ENST00000464673 ZEB1P37275 1124 aaPredicted RBP15.35■□□□□ 0.05
LINC01998-201ENST00000464673 CEP162Q5TB80 1403 aa15.34■□□□□ 0.05
LINC01998-201ENST00000464673 PPARGC1BQ86YN6 1023 aaKnown RBP15.33■□□□□ 0.04
LINC01998-201ENST00000464673 UGGT2Q9NYU1 1516 aa15.32■□□□□ 0.04
LINC01998-201ENST00000464673 CLIP1P30622 1438 aa15.32■□□□□ 0.04
LINC01998-201ENST00000464673 SHROOM2Q13796 1616 aa15.31■□□□□ 0.04
LINC01998-201ENST00000464673 PRG4Q92954 1404 aaPredicted RBP15.3■□□□□ 0.04
LINC01998-201ENST00000464673 P3H3Q8IVL6 736 aa15.29■□□□□ 0.04
LINC01998-201ENST00000464673 ARHGAP35Q9NRY4 1499 aa15.28■□□□□ 0.04
LINC01998-201ENST00000464673 DISP1Q96F81 1524 aa15.28■□□□□ 0.04
LINC01998-201ENST00000464673 CARMIL2Q6F5E8 1435 aa15.27■□□□□ 0.03
LINC01998-201ENST00000464673 SAMD9Q5K651 1589 aa15.27■□□□□ 0.03
LINC01998-201ENST00000464673 EFCAB5A4FU69 1503 aa15.26■□□□□ 0.03
LINC01998-201ENST00000464673 ERCC6L2Q5T890 1561 aa15.24■□□□□ 0.03
LINC01998-201ENST00000464673 KIAA0556O60303 1618 aa15.24■□□□□ 0.03
LINC01998-201ENST00000464673 ARAP1Q96P48 1450 aa15.23■□□□□ 0.03
LINC01998-201ENST00000464673 FHOD3Q2V2M9 1422 aa15.23■□□□□ 0.03
LINC01998-201ENST00000464673 TTBK1Q5TCY1 1321 aaPredicted RBP15.21■□□□□ 0.03
LINC01998-201ENST00000464673 ARHGEF11O15085 1522 aa15.18■□□□□ 0.02
LINC01998-201ENST00000464673 PTPRGP23470 1445 aa15.17■□□□□ 0.02
LINC01998-201ENST00000464673 FMN1Q68DA7 1419 aa15.15■□□□□ 0.02
LINC01998-201ENST00000464673 RIMBP3CA6NJZ7 1639 aa15.13■□□□□ 0.01
LINC01998-201ENST00000464673 RIMBP3BA6NNM3 1639 aa15.13■□□□□ 0.01
LINC01998-201ENST00000464673 RIMBP3Q9UFD9 1639 aa15.13■□□□□ 0.01
LINC01998-201ENST00000464673 VPS8Q8N3P4 1428 aa15.12■□□□□ 0.01
LINC01998-201ENST00000464673 DNAJC5Q9H3Z4 198 aa15.12■□□□□ 0.01
LINC01998-201ENST00000464673 PLB1Q6P1J6 1458 aa15.09■□□□□ 0.01
LINC01998-201ENST00000464673 CYB5RLQ6IPT4 315 aa15.08■□□□□ 0
LINC01998-201ENST00000464673 ATP1B4Q9UN42 357 aaPredicted RBP15.08■□□□□ 0
LINC01998-201ENST00000464673 CASKIN1Q8WXD9 1431 aa15.06■□□□□ 0
LINC01998-201ENST00000464673 UACAQ9BZF9 1416 aa15.06■□□□□ 0
LINC01998-201ENST00000464673 PCF11O94913 1555 aaKnown RBP15.06■□□□□ 0
LINC01998-201ENST00000464673 ABCA8O94911 1581 aa15.05■□□□□ -0
LINC01998-201ENST00000464673 RAPGEF6Q8TEU7 1601 aa15.05■□□□□ -0
LINC01998-201ENST00000464673 FYCO1Q9BQS8 1478 aa15.04■□□□□ -0
LINC01998-201ENST00000464673 ARID3CA6NKF2 412 aa15.02■□□□□ -0
LINC01998-201ENST00000464673 NUP153P49790 1475 aaKnown RBP15.02■□□□□ -0
LINC01998-201ENST00000464673 ABCC2Q92887 1545 aa15.02□□□□□ -0.01
LINC01998-201ENST00000464673 UHRF1BP1LA0JNW5 1464 aa15.01□□□□□ -0.01
LINC01998-201ENST00000464673 HECW1Q76N89 1606 aa15□□□□□ -0.01
LINC01998-201ENST00000464673 ADCY10Q96PN6 1610 aa14.99□□□□□ -0.01
LINC01998-201ENST00000464673 APLP2Q06481 763 aa14.98□□□□□ -0.01
LINC01998-201ENST00000464673 EPRSP07814 1512 aaKnown RBP14.98□□□□□ -0.01
LINC01998-201ENST00000464673 LRRIQ1Q96JM4 1722 aa14.97□□□□□ -0.01
LINC01998-201ENST00000464673 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.97□□□□□ -0.01
LINC01998-201ENST00000464673 HNRNPUL2Q1KMD3 747 aaKnown RBP14.97□□□□□ -0.01
LINC01998-201ENST00000464673 ATP10BO94823 1461 aa14.97□□□□□ -0.01
LINC01998-201ENST00000464673 CDK13Q14004 1512 aaKnown RBP14.96□□□□□ -0.02
LINC01998-201ENST00000464673 CCDC18Q5T9S5 1454 aa14.95□□□□□ -0.02
LINC01998-201ENST00000464673 KDM5BQ9UGL1 1544 aa14.95□□□□□ -0.02
LINC01998-201ENST00000464673 NPM1P06748 294 aaKnown RBP eCLIP14.93□□□□□ -0.02
LINC01998-201ENST00000464673 TIAM1Q13009 1591 aa14.92□□□□□ -0.02
LINC01998-201ENST00000464673 MAP3K1Q13233 1512 aa14.91□□□□□ -0.02
LINC01998-201ENST00000464673 ZCCHC11Q5TAX3 1644 aaKnown RBP14.91□□□□□ -0.02
LINC01998-201ENST00000464673 KANK4Q5T7N3 995 aaPredicted RBP14.91□□□□□ -0.02
LINC01998-201ENST00000464673 CDK11AQ9UQ88 783 aaPredicted RBP14.91□□□□□ -0.02
LINC01998-201ENST00000464673 CFAP43Q8NDM7 1665 aa14.89□□□□□ -0.03
LINC01998-201ENST00000464673 PLEKHD1A6NEE1 506 aa14.89□□□□□ -0.03
LINC01998-201ENST00000464673 LRRC9Q6ZRR7 1453 aa14.87□□□□□ -0.03
LINC01998-201ENST00000464673 MTUS2Q5JR59 1369 aa14.87□□□□□ -0.03
LINC01998-201ENST00000464673 MAGI3Q5TCQ9 1506 aa14.86□□□□□ -0.03
LINC01998-201ENST00000464673 ASXL2Q76L83 1435 aa14.84□□□□□ -0.03
LINC01998-201ENST00000464673 TROQ12816 1431 aaPredicted RBP14.83□□□□□ -0.03
LINC01998-201ENST00000464673 CCER1Q8TC90 406 aaPredicted RBP14.83□□□□□ -0.04
LINC01998-201ENST00000464673 KCNH8Q96L42 1107 aa14.82□□□□□ -0.04
LINC01998-201ENST00000464673 MAPKBP1O60336 1514 aa14.82□□□□□ -0.04
LINC01998-201ENST00000464673 WDR7Q9Y4E6 1490 aa14.82□□□□□ -0.04
LINC01998-201ENST00000464673 EHBP1L1Q8N3D4 1523 aa14.81□□□□□ -0.04
LINC01998-201ENST00000464673 KIF14Q15058 1648 aa14.77□□□□□ -0.04
LINC01998-201ENST00000464673 NCOA2Q15596 1464 aa14.76□□□□□ -0.05
LINC01998-201ENST00000464673 SUPT6HQ7KZ85 1726 aaKnown RBP14.76□□□□□ -0.05
LINC01998-201ENST00000464673 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.72□□□□□ -0.05
LINC01998-201ENST00000464673 ABCC10Q5T3U5 1492 aa14.72□□□□□ -0.05
LINC01998-201ENST00000464673 PHLDB1Q86UU1 1377 aa14.72□□□□□ -0.05
LINC01998-201ENST00000464673 FAM69CQ0P6D2 419 aa14.71□□□□□ -0.06
LINC01998-201ENST00000464673 TTC37Q6PGP7 1564 aa14.71□□□□□ -0.06
LINC01998-201ENST00000464673 CCNB3Q8WWL7 1395 aa14.7□□□□□ -0.06
LINC01998-201ENST00000464673 DIP2BQ9P265 1576 aa14.69□□□□□ -0.06
LINC01998-201ENST00000464673 ABCA9Q8IUA7 1624 aa14.69□□□□□ -0.06
LINC01998-201ENST00000464673 GPATCH8Q9UKJ3 1502 aaKnown RBP14.69□□□□□ -0.06
LINC01998-201ENST00000464673 MYOM3Q5VTT5 1437 aa14.67□□□□□ -0.06
LINC01998-201ENST00000464673 GLI2P10070 1586 aa14.66□□□□□ -0.06
LINC01998-201ENST00000464673 CFDP1Q9UEE9 299 aaPredicted RBP14.66□□□□□ -0.06
LINC01998-201ENST00000464673 CDC42BPAQ5VT25 1732 aa14.66□□□□□ -0.06
LINC01998-201ENST00000464673 CD109Q6YHK3 1445 aa14.65□□□□□ -0.06
LINC01998-201ENST00000464673 PLCH2O75038 1416 aa14.65□□□□□ -0.06
LINC01998-201ENST00000464673 KIF13AQ9H1H9 1805 aa14.64□□□□□ -0.07
LINC01998-201ENST00000464673 MYO5CQ9NQX4 1742 aa14.64□□□□□ -0.07
LINC01998-201ENST00000464673 TRHP20396 242 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms