RNA–Protein interactions for RNA: ENST00000464363.5

NELFCD-202, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 764 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-202ENST00000464363 CUL7Q14999 1698 aa30.27■■■□□ 2.44
NELFCD-202ENST00000464363 RUSC2Q8N2Y8 1516 aa30.23■■■□□ 2.43
NELFCD-202ENST00000464363 CARMIL1Q5VZK9 1371 aa30.2■■■□□ 2.43
NELFCD-202ENST00000464363 KIAA0586Q9BVV6 1533 aa30.19■■■□□ 2.42
NELFCD-202ENST00000464363 NPM1P06748 294 aaKnown RBP eCLIP30.03■■■□□ 2.4
NELFCD-202ENST00000464363 CARMIL2Q6F5E8 1435 aa29.94■■■□□ 2.38
NELFCD-202ENST00000464363 RAPGEF2Q9Y4G8 1499 aa29.93■■■□□ 2.38
NELFCD-202ENST00000464363 IQGAP2Q13576 1575 aa29.9■■■□□ 2.38
NELFCD-202ENST00000464363 PTPRGP23470 1445 aa29.9■■■□□ 2.38
NELFCD-202ENST00000464363 TTBK1Q5TCY1 1321 aaPredicted RBP29.85■■■□□ 2.37
NELFCD-202ENST00000464363 TNIKQ9UKE5 1360 aa29.85■■■□□ 2.37
NELFCD-202ENST00000464363 ADCY10Q96PN6 1610 aa29.85■■■□□ 2.37
NELFCD-202ENST00000464363 MAPKBP1O60336 1514 aa29.81■■■□□ 2.36
NELFCD-202ENST00000464363 FAM69CQ0P6D2 419 aa29.8■■■□□ 2.36
NELFCD-202ENST00000464363 ABCC10Q5T3U5 1492 aa29.77■■■□□ 2.36
NELFCD-202ENST00000464363 KIF13AQ9H1H9 1805 aa29.75■■■□□ 2.35
NELFCD-202ENST00000464363 DISP1Q96F81 1524 aa29.72■■■□□ 2.35
NELFCD-202ENST00000464363 UGGT2Q9NYU1 1516 aa29.72■■■□□ 2.35
NELFCD-202ENST00000464363 ABCC2Q92887 1545 aa29.66■■■□□ 2.34
NELFCD-202ENST00000464363 UACAQ9BZF9 1416 aa29.65■■■□□ 2.34
NELFCD-202ENST00000464363 PRXQ9BXM0 1461 aa29.65■■■□□ 2.34
NELFCD-202ENST00000464363 DIP2BQ9P265 1576 aa29.64■■■□□ 2.34
NELFCD-202ENST00000464363 UHRF1BP1LA0JNW5 1464 aa29.63■■■□□ 2.33
NELFCD-202ENST00000464363 KIAA0556O60303 1618 aa29.6■■■□□ 2.33
NELFCD-202ENST00000464363 CTTNBP2Q8WZ74 1663 aa29.6■■■□□ 2.33
NELFCD-202ENST00000464363 GOLGA3Q08378 1498 aa29.57■■■□□ 2.32
NELFCD-202ENST00000464363 CSRNP3Q8WYN3 585 aa29.57■■■□□ 2.32
NELFCD-202ENST00000464363 PLB1Q6P1J6 1458 aa29.55■■■□□ 2.32
NELFCD-202ENST00000464363 ASXL2Q76L83 1435 aa29.54■■■□□ 2.32
NELFCD-202ENST00000464363 AEBP2Q6ZN18 517 aaPredicted RBP29.51■■■□□ 2.31
NELFCD-202ENST00000464363 FAM9AQ8IZU1 332 aaPredicted RBP29.49■■■□□ 2.31
NELFCD-202ENST00000464363 KDM5BQ9UGL1 1544 aa29.49■■■□□ 2.31
NELFCD-202ENST00000464363 EEA1Q15075 1411 aa29.47■■■□□ 2.31
NELFCD-202ENST00000464363 TSPOAP1O95153 1857 aa29.42■■■□□ 2.3
NELFCD-202ENST00000464363 GLI2P10070 1586 aa29.4■■■□□ 2.3
NELFCD-202ENST00000464363 ZCCHC11Q5TAX3 1644 aaKnown RBP29.38■■■□□ 2.29
NELFCD-202ENST00000464363 KDM6BO15054 1643 aa29.37■■■□□ 2.29
NELFCD-202ENST00000464363 EPRSP07814 1512 aaKnown RBP29.35■■■□□ 2.29
NELFCD-202ENST00000464363 P3H3Q8IVL6 736 aa29.33■■■□□ 2.29
NELFCD-202ENST00000464363 ABCA8O94911 1581 aa29.31■■■□□ 2.28
NELFCD-202ENST00000464363 WDR7Q9Y4E6 1490 aa29.29■■■□□ 2.28
NELFCD-202ENST00000464363 KCNH8Q96L42 1107 aa29.22■■■□□ 2.27
NELFCD-202ENST00000464363 MAP3K4Q9Y6R4 1608 aa29.22■■■□□ 2.27
NELFCD-202ENST00000464363 TEX14Q8IWB6 1497 aa29.22■■■□□ 2.27
NELFCD-202ENST00000464363 RANGAP1P46060 587 aaPredicted RBP29.21■■■□□ 2.27
NELFCD-202ENST00000464363 PPRC1Q5VV67 1664 aaKnown RBP29.21■■■□□ 2.27
NELFCD-202ENST00000464363 CHIC1Q5VXU3 224 aa29.2■■■□□ 2.26
NELFCD-202ENST00000464363 SAMD9Q5K651 1589 aa29.19■■■□□ 2.26
NELFCD-202ENST00000464363 ARID3CA6NKF2 412 aa29.16■■■□□ 2.26
NELFCD-202ENST00000464363 KIF21BO75037 1637 aa29.13■■■□□ 2.25
NELFCD-202ENST00000464363 CD109Q6YHK3 1445 aa29.12■■■□□ 2.25
NELFCD-202ENST00000464363 ATP10BO94823 1461 aa29.11■■■□□ 2.25
NELFCD-202ENST00000464363 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.08■■■□□ 2.25
NELFCD-202ENST00000464363 HNRNPUL2Q1KMD3 747 aaKnown RBP29.08■■■□□ 2.25
NELFCD-202ENST00000464363 CFAP43Q8NDM7 1665 aa29.06■■■□□ 2.24
NELFCD-202ENST00000464363 RAPGEF6Q8TEU7 1601 aa29.06■■■□□ 2.24
NELFCD-202ENST00000464363 MAGI3Q5TCQ9 1506 aa29.05■■■□□ 2.24
NELFCD-202ENST00000464363 COL17A1Q9UMD9 1497 aaPredicted RBP29.05■■■□□ 2.24
NELFCD-202ENST00000464363 FHOD3Q2V2M9 1422 aa29.05■■■□□ 2.24
NELFCD-202ENST00000464363 UBTFP17480 764 aaKnown RBP29.05■■■□□ 2.24
NELFCD-202ENST00000464363 EFCAB5A4FU69 1503 aa29.01■■■□□ 2.23
NELFCD-202ENST00000464363 EHMT2Q96KQ7 1210 aa29.01■■■□□ 2.23
NELFCD-202ENST00000464363 KDM4FA0A1W2PPD8 638 aa28.99■■■□□ 2.23
NELFCD-202ENST00000464363 NUP153P49790 1475 aaKnown RBP28.97■■■□□ 2.23
NELFCD-202ENST00000464363 PLEKHD1A6NEE1 506 aa28.92■■■□□ 2.22
NELFCD-202ENST00000464363 ABCA9Q8IUA7 1624 aa28.88■■■□□ 2.21
NELFCD-202ENST00000464363 PHLDB1Q86UU1 1377 aa28.87■■■□□ 2.21
NELFCD-202ENST00000464363 ARAP3Q8WWN8 1544 aa28.83■■■□□ 2.21
NELFCD-202ENST00000464363 ADGRL1O94910 1474 aa28.8■■■□□ 2.2
NELFCD-202ENST00000464363 FMN1Q68DA7 1419 aa28.8■■■□□ 2.2
NELFCD-202ENST00000464363 ATP1B4Q9UN42 357 aaPredicted RBP28.79■■■□□ 2.2
NELFCD-202ENST00000464363 NEO1Q92859 1461 aa28.77■■■□□ 2.2
NELFCD-202ENST00000464363 ARHGAP35Q9NRY4 1499 aa28.76■■■□□ 2.19
NELFCD-202ENST00000464363 RAPGEF3O95398 923 aa28.7■■■□□ 2.18
NELFCD-202ENST00000464363 CDK11AQ9UQ88 783 aaPredicted RBP28.7■■■□□ 2.18
NELFCD-202ENST00000464363 CDK13Q14004 1512 aaKnown RBP28.69■■■□□ 2.18
NELFCD-202ENST00000464363 HECW1Q76N89 1606 aa28.67■■■□□ 2.18
NELFCD-202ENST00000464363 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.65■■■□□ 2.18
NELFCD-202ENST00000464363 FANCAO15360 1455 aa28.62■■■□□ 2.17
NELFCD-202ENST00000464363 AKNAQ7Z591 1439 aa28.6■■■□□ 2.17
NELFCD-202ENST00000464363 CFAP74Q9C0B2 1584 aa28.58■■■□□ 2.17
NELFCD-202ENST00000464363 TTC37Q6PGP7 1564 aa28.58■■■□□ 2.17
NELFCD-202ENST00000464363 DENND4BO75064 1496 aaPredicted RBP28.57■■■□□ 2.16
NELFCD-202ENST00000464363 PLCH2O75038 1416 aa28.53■■■□□ 2.16
NELFCD-202ENST00000464363 FRMPD1Q5SYB0 1578 aa28.51■■■□□ 2.15
NELFCD-202ENST00000464363 CLIP1P30622 1438 aa28.51■■■□□ 2.15
NELFCD-202ENST00000464363 TROQ12816 1431 aaPredicted RBP28.49■■■□□ 2.15
NELFCD-202ENST00000464363 ARID4BQ4LE39 1312 aaPredicted RBP28.48■■■□□ 2.15
NELFCD-202ENST00000464363 EFCAB2Q5VUJ9 269 aa28.48■■■□□ 2.15
NELFCD-202ENST00000464363 CASKIN1Q8WXD9 1431 aa28.48■■■□□ 2.15
NELFCD-202ENST00000464363 KIF14Q15058 1648 aa28.45■■■□□ 2.14
NELFCD-202ENST00000464363 RICTORQ6R327 1708 aa28.44■■■□□ 2.14
NELFCD-202ENST00000464363 CCDC18Q5T9S5 1454 aa28.44■■■□□ 2.14
NELFCD-202ENST00000464363 SCAPERQ9BY12 1400 aa28.43■■■□□ 2.14
NELFCD-202ENST00000464363 MYO5CQ9NQX4 1742 aa28.4■■■□□ 2.14
NELFCD-202ENST00000464363 PCF11O94913 1555 aaKnown RBP28.4■■■□□ 2.14
NELFCD-202ENST00000464363 MAGI2Q86UL8 1455 aa28.39■■■□□ 2.13
NELFCD-202ENST00000464363 ARHGEF40Q8TER5 1519 aa28.38■■■□□ 2.13
NELFCD-202ENST00000464363 ZMYM4Q5VZL5 1548 aa28.38■■■□□ 2.13
NELFCD-202ENST00000464363 LRRIQ1Q96JM4 1722 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms