RNA–Protein interactions for RNA: ENST00000464119.1

SREBF2-206, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-206ENST00000464119 RIMBP3CA6NJZ7 1639 aa19.47■□□□□ 0.71
SREBF2-206ENST00000464119 RIMBP3BA6NNM3 1639 aa19.47■□□□□ 0.71
SREBF2-206ENST00000464119 RIMBP3Q9UFD9 1639 aa19.47■□□□□ 0.71
SREBF2-206ENST00000464119 FAM9AQ8IZU1 332 aaPredicted RBP19.46■□□□□ 0.71
SREBF2-206ENST00000464119 KIF21BO75037 1637 aa19.45■□□□□ 0.7
SREBF2-206ENST00000464119 JPH4Q96JJ6 628 aa19.4■□□□□ 0.7
SREBF2-206ENST00000464119 IQGAP2Q13576 1575 aa19.4■□□□□ 0.7
SREBF2-206ENST00000464119 CTTNBP2Q8WZ74 1663 aa19.4■□□□□ 0.7
SREBF2-206ENST00000464119 ERCC6L2Q5T890 1561 aa19.38■□□□□ 0.69
SREBF2-206ENST00000464119 PRG4Q92954 1404 aaPredicted RBP19.35■□□□□ 0.69
SREBF2-206ENST00000464119 LOC105371045A0A1W2PR82 267 aa19.35■□□□□ 0.69
SREBF2-206ENST00000464119 ARAP1Q96P48 1450 aa19.35■□□□□ 0.69
SREBF2-206ENST00000464119 UGGT2Q9NYU1 1516 aa19.33■□□□□ 0.68
SREBF2-206ENST00000464119 GOLGA3Q08378 1498 aa19.3■□□□□ 0.68
SREBF2-206ENST00000464119 DISP1Q96F81 1524 aa19.27■□□□□ 0.68
SREBF2-206ENST00000464119 CARMIL2Q6F5E8 1435 aa19.25■□□□□ 0.67
SREBF2-206ENST00000464119 CYB5RLQ6IPT4 315 aa19.23■□□□□ 0.67
SREBF2-206ENST00000464119 KIAA0556O60303 1618 aa19.22■□□□□ 0.67
SREBF2-206ENST00000464119 SAMD9Q5K651 1589 aa19.19■□□□□ 0.66
SREBF2-206ENST00000464119 TNIKQ9UKE5 1360 aa19.19■□□□□ 0.66
SREBF2-206ENST00000464119 UBTFP17480 764 aaKnown RBP19.17■□□□□ 0.66
SREBF2-206ENST00000464119 EHMT2Q96KQ7 1210 aa19.16■□□□□ 0.66
SREBF2-206ENST00000464119 PTPRGP23470 1445 aa19.14■□□□□ 0.65
SREBF2-206ENST00000464119 EFCAB5A4FU69 1503 aa19.12■□□□□ 0.65
SREBF2-206ENST00000464119 ADCY10Q96PN6 1610 aa19.07■□□□□ 0.64
SREBF2-206ENST00000464119 UHRF1BP1LA0JNW5 1464 aa19.04■□□□□ 0.64
SREBF2-206ENST00000464119 UACAQ9BZF9 1416 aa19.04■□□□□ 0.64
SREBF2-206ENST00000464119 ARHGAP35Q9NRY4 1499 aa19.03■□□□□ 0.64
SREBF2-206ENST00000464119 RANGAP1P46060 587 aaPredicted RBP19.03■□□□□ 0.64
SREBF2-206ENST00000464119 P3H3Q8IVL6 736 aa19.03■□□□□ 0.64
SREBF2-206ENST00000464119 ABCA8O94911 1581 aa19.02■□□□□ 0.64
SREBF2-206ENST00000464119 FHOD3Q2V2M9 1422 aa19.02■□□□□ 0.64
SREBF2-206ENST00000464119 ABCC2Q92887 1545 aa19.02■□□□□ 0.64
SREBF2-206ENST00000464119 TTBK1Q5TCY1 1321 aaPredicted RBP19.01■□□□□ 0.63
SREBF2-206ENST00000464119 PLB1Q6P1J6 1458 aa19■□□□□ 0.63
SREBF2-206ENST00000464119 CLIP1P30622 1438 aa18.95■□□□□ 0.62
SREBF2-206ENST00000464119 KDM5BQ9UGL1 1544 aa18.95■□□□□ 0.62
SREBF2-206ENST00000464119 RAPGEF6Q8TEU7 1601 aa18.94■□□□□ 0.62
SREBF2-206ENST00000464119 MAPKBP1O60336 1514 aa18.93■□□□□ 0.62
SREBF2-206ENST00000464119 CEP162Q5TB80 1403 aa18.92■□□□□ 0.62
SREBF2-206ENST00000464119 FMN1Q68DA7 1419 aa18.91■□□□□ 0.62
SREBF2-206ENST00000464119 NPM1P06748 294 aaKnown RBP eCLIP18.9■□□□□ 0.62
SREBF2-206ENST00000464119 TRIM26Q12899 539 aaPredicted RBP18.9■□□□□ 0.62
SREBF2-206ENST00000464119 ZCCHC11Q5TAX3 1644 aaKnown RBP18.89■□□□□ 0.62
SREBF2-206ENST00000464119 NUP153P49790 1475 aaKnown RBP18.87■□□□□ 0.61
SREBF2-206ENST00000464119 ATP10BO94823 1461 aa18.84■□□□□ 0.61
SREBF2-206ENST00000464119 PCGF6Q9BYE7 350 aa18.82■□□□□ 0.6
SREBF2-206ENST00000464119 ASXL2Q76L83 1435 aa18.82■□□□□ 0.6
SREBF2-206ENST00000464119 HECW1Q76N89 1606 aa18.81■□□□□ 0.6
SREBF2-206ENST00000464119 ABCC10Q5T3U5 1492 aa18.8■□□□□ 0.6
SREBF2-206ENST00000464119 CASKIN1Q8WXD9 1431 aa18.8■□□□□ 0.6
SREBF2-206ENST00000464119 PCF11O94913 1555 aaKnown RBP18.8■□□□□ 0.6
SREBF2-206ENST00000464119 DIP2BQ9P265 1576 aa18.77■□□□□ 0.6
SREBF2-206ENST00000464119 FYCO1Q9BQS8 1478 aa18.77■□□□□ 0.59
SREBF2-206ENST00000464119 KIF13AQ9H1H9 1805 aa18.77■□□□□ 0.59
SREBF2-206ENST00000464119 EPRSP07814 1512 aaKnown RBP18.76■□□□□ 0.59
SREBF2-206ENST00000464119 LRRIQ1Q96JM4 1722 aa18.76■□□□□ 0.59
SREBF2-206ENST00000464119 WDR7Q9Y4E6 1490 aa18.76■□□□□ 0.59
SREBF2-206ENST00000464119 GLI2P10070 1586 aa18.74■□□□□ 0.59
SREBF2-206ENST00000464119 ARID3CA6NKF2 412 aa18.74■□□□□ 0.59
SREBF2-206ENST00000464119 TRHP20396 242 aaPredicted RBP18.73■□□□□ 0.59
SREBF2-206ENST00000464119 CDK13Q14004 1512 aaKnown RBP18.73■□□□□ 0.59
SREBF2-206ENST00000464119 CCDC18Q5T9S5 1454 aa18.7■□□□□ 0.58
SREBF2-206ENST00000464119 VPS8Q8N3P4 1428 aa18.69■□□□□ 0.58
SREBF2-206ENST00000464119 FAM69CQ0P6D2 419 aa18.69■□□□□ 0.58
SREBF2-206ENST00000464119 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.67■□□□□ 0.58
SREBF2-206ENST00000464119 HRCP23327 699 aa18.67■□□□□ 0.58
SREBF2-206ENST00000464119 HNRNPUL2Q1KMD3 747 aaKnown RBP18.67■□□□□ 0.58
SREBF2-206ENST00000464119 ATP1B4Q9UN42 357 aaPredicted RBP18.67■□□□□ 0.58
SREBF2-206ENST00000464119 MAP3K4Q9Y6R4 1608 aa18.65■□□□□ 0.58
SREBF2-206ENST00000464119 PLEKHD1A6NEE1 506 aa18.64■□□□□ 0.57
SREBF2-206ENST00000464119 ABCA9Q8IUA7 1624 aa18.62■□□□□ 0.57
SREBF2-206ENST00000464119 CFAP43Q8NDM7 1665 aa18.61■□□□□ 0.57
SREBF2-206ENST00000464119 KCNH8Q96L42 1107 aa18.61■□□□□ 0.57
SREBF2-206ENST00000464119 MAGI3Q5TCQ9 1506 aa18.6■□□□□ 0.57
SREBF2-206ENST00000464119 TROQ12816 1431 aaPredicted RBP18.6■□□□□ 0.57
SREBF2-206ENST00000464119 CDK11AQ9UQ88 783 aaPredicted RBP18.6■□□□□ 0.57
SREBF2-206ENST00000464119 PPRC1Q5VV67 1664 aaKnown RBP18.6■□□□□ 0.57
SREBF2-206ENST00000464119 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.57■□□□□ 0.56
SREBF2-206ENST00000464119 MAP3K1Q13233 1512 aa18.56■□□□□ 0.56
SREBF2-206ENST00000464119 CD109Q6YHK3 1445 aa18.56■□□□□ 0.56
SREBF2-206ENST00000464119 KIF14Q15058 1648 aa18.55■□□□□ 0.56
SREBF2-206ENST00000464119 TIAM1Q13009 1591 aa18.55■□□□□ 0.56
SREBF2-206ENST00000464119 TSPOAP1O95153 1857 aa18.54■□□□□ 0.56
SREBF2-206ENST00000464119 TTC37Q6PGP7 1564 aa18.53■□□□□ 0.56
SREBF2-206ENST00000464119 TEX14Q8IWB6 1497 aa18.52■□□□□ 0.55
SREBF2-206ENST00000464119 EHBP1L1Q8N3D4 1523 aa18.49■□□□□ 0.55
SREBF2-206ENST00000464119 MTUS2Q5JR59 1369 aa18.47■□□□□ 0.55
SREBF2-206ENST00000464119 LRRC9Q6ZRR7 1453 aa18.46■□□□□ 0.55
SREBF2-206ENST00000464119 ARAP3Q8WWN8 1544 aa18.46■□□□□ 0.55
SREBF2-206ENST00000464119 PLCH2O75038 1416 aa18.45■□□□□ 0.54
SREBF2-206ENST00000464119 MYO5CQ9NQX4 1742 aa18.45■□□□□ 0.54
SREBF2-206ENST00000464119 NEO1Q92859 1461 aa18.42■□□□□ 0.54
SREBF2-206ENST00000464119 ZEB1P37275 1124 aaPredicted RBP18.42■□□□□ 0.54
SREBF2-206ENST00000464119 CFAP74Q9C0B2 1584 aa18.41■□□□□ 0.54
SREBF2-206ENST00000464119 PREX2Q70Z35 1606 aa18.41■□□□□ 0.54
SREBF2-206ENST00000464119 PHLDB1Q86UU1 1377 aa18.41■□□□□ 0.54
SREBF2-206ENST00000464119 CDC42BPAQ5VT25 1732 aa18.4■□□□□ 0.54
SREBF2-206ENST00000464119 SUPT6HQ7KZ85 1726 aaKnown RBP18.4■□□□□ 0.54
SREBF2-206ENST00000464119 FANCAO15360 1455 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms