RNA–Protein interactions for RNA: ENST00000463822.1

RGPD6-207, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 1 (best)

Gene RGPD6, Length 6,902 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-207ENST00000463822 FHOD3Q2V2M9 1422 aa6.82□□□□□ -1.32
RGPD6-207ENST00000463822 CDK11AQ9UQ88 783 aaPredicted RBP6.82□□□□□ -1.32
RGPD6-207ENST00000463822 FMN1Q68DA7 1419 aa6.82□□□□□ -1.32
RGPD6-207ENST00000463822 WDR62O43379 1518 aa6.82□□□□□ -1.32
RGPD6-207ENST00000463822 HRCP23327 699 aa6.81□□□□□ -1.32
RGPD6-207ENST00000463822 MTUS2Q5JR59 1369 aa6.81□□□□□ -1.32
RGPD6-207ENST00000463822 SNAPC4Q5SXM2 1469 aa6.8□□□□□ -1.32
RGPD6-207ENST00000463822 PRDM2Q13029 1718 aa6.8□□□□□ -1.32
RGPD6-207ENST00000463822 FAM50AQ14320 339 aaKnown RBP6.8□□□□□ -1.32
RGPD6-207ENST00000463822 ARAP1Q96P48 1450 aa6.8□□□□□ -1.32
RGPD6-207ENST00000463822 ARHGAP35Q9NRY4 1499 aa6.8□□□□□ -1.32
RGPD6-207ENST00000463822 CARMIL2Q6F5E8 1435 aa6.79□□□□□ -1.32
RGPD6-207ENST00000463822 KIF21AQ7Z4S6 1674 aa6.79□□□□□ -1.32
RGPD6-207ENST00000463822 KANK4Q5T7N3 995 aaPredicted RBP6.78□□□□□ -1.32
RGPD6-207ENST00000463822 JPH4Q96JJ6 628 aa6.78□□□□□ -1.32
RGPD6-207ENST00000463822 CUL7Q14999 1698 aa6.78□□□□□ -1.32
RGPD6-207ENST00000463822 MAGI1Q96QZ7 1491 aaPredicted RBP6.77□□□□□ -1.33
RGPD6-207ENST00000463822 KIAA0586Q9BVV6 1533 aa6.76□□□□□ -1.33
RGPD6-207ENST00000463822 EFCAB5A4FU69 1503 aa6.76□□□□□ -1.33
RGPD6-207ENST00000463822 SYNJ2O15056 1496 aa6.76□□□□□ -1.33
RGPD6-207ENST00000463822 GRIN2AQ12879 1464 aa6.75□□□□□ -1.33
RGPD6-207ENST00000463822 ABCA5Q8WWZ7 1642 aa6.75□□□□□ -1.33
RGPD6-207ENST00000463822 TARBP1Q13395 1621 aaKnown RBP6.74□□□□□ -1.33
RGPD6-207ENST00000463822 PLEKHD1A6NEE1 506 aa6.73□□□□□ -1.33
RGPD6-207ENST00000463822 CASKIN1Q8WXD9 1431 aa6.73□□□□□ -1.33
RGPD6-207ENST00000463822 ADAMTS12P58397 1594 aa6.72□□□□□ -1.33
RGPD6-207ENST00000463822 CCNB3Q8WWL7 1395 aa6.72□□□□□ -1.33
RGPD6-207ENST00000463822 THOC2Q8NI27 1593 aaKnown RBP6.72□□□□□ -1.33
RGPD6-207ENST00000463822 PTPRGP23470 1445 aa6.71□□□□□ -1.34
RGPD6-207ENST00000463822 IQGAP2Q13576 1575 aa6.71□□□□□ -1.34
RGPD6-207ENST00000463822 EIF4G3O43432 1585 aaKnown RBP6.71□□□□□ -1.34
RGPD6-207ENST00000463822 WDR97A6NE52 1622 aa6.71□□□□□ -1.34
RGPD6-207ENST00000463822 FYCO1Q9BQS8 1478 aa6.71□□□□□ -1.34
RGPD6-207ENST00000463822 ZNF777Q9ULD5 760 aaPredicted RBP6.7□□□□□ -1.34
RGPD6-207ENST00000463822 NPM1P06748 294 aaKnown RBP eCLIP6.7□□□□□ -1.34
RGPD6-207ENST00000463822 PRG4Q92954 1404 aaPredicted RBP6.69□□□□□ -1.34
RGPD6-207ENST00000463822 OSCARQ8IYS5 282 aa6.69□□□□□ -1.34
RGPD6-207ENST00000463822 LRRC9Q6ZRR7 1453 aa6.68□□□□□ -1.34
RGPD6-207ENST00000463822 NUP160Q12769 1436 aa6.68□□□□□ -1.34
RGPD6-207ENST00000463822 CFDP1Q9UEE9 299 aaPredicted RBP6.68□□□□□ -1.34
RGPD6-207ENST00000463822 CCDC18Q5T9S5 1454 aa6.67□□□□□ -1.34
RGPD6-207ENST00000463822 PHLDB1Q86UU1 1377 aa6.66□□□□□ -1.34
RGPD6-207ENST00000463822 MAP3K1Q13233 1512 aa6.66□□□□□ -1.34
RGPD6-207ENST00000463822 KCNH8Q96L42 1107 aa6.66□□□□□ -1.34
RGPD6-207ENST00000463822 CHIC2Q9UKJ5 165 aa6.66□□□□□ -1.34
RGPD6-207ENST00000463822 TIAM1Q13009 1591 aa6.65□□□□□ -1.34
RGPD6-207ENST00000463822 TRIM52Q96A61 297 aa6.65□□□□□ -1.34
RGPD6-207ENST00000463822 UGGT2Q9NYU1 1516 aa6.65□□□□□ -1.35
RGPD6-207ENST00000463822 MYT1LQ9UL68 1186 aa6.64□□□□□ -1.35
RGPD6-207ENST00000463822 PCF11O94913 1555 aaKnown RBP6.64□□□□□ -1.35
RGPD6-207ENST00000463822 TSPY4P0CV99 314 aa6.64□□□□□ -1.35
RGPD6-207ENST00000463822 TSPY10P0CW01 314 aa6.64□□□□□ -1.35
RGPD6-207ENST00000463822 RRBP1Q9P2E9 1410 aaKnown RBP6.63□□□□□ -1.35
RGPD6-207ENST00000463822 MYOM3Q5VTT5 1437 aa6.63□□□□□ -1.35
RGPD6-207ENST00000463822 NCOA2Q15596 1464 aa6.63□□□□□ -1.35
RGPD6-207ENST00000463822 EPRSP07814 1512 aaKnown RBP6.63□□□□□ -1.35
RGPD6-207ENST00000463822 FGD6Q6ZV73 1430 aa6.62□□□□□ -1.35
RGPD6-207ENST00000463822 PBRM1Q86U86 1689 aa6.62□□□□□ -1.35
RGPD6-207ENST00000463822 DISP1Q96F81 1524 aa6.62□□□□□ -1.35
RGPD6-207ENST00000463822 RRP7BPQ9NSQ0 103 aa6.62□□□□□ -1.35
RGPD6-207ENST00000463822 HECW1Q76N89 1606 aa6.62□□□□□ -1.35
RGPD6-207ENST00000463822 PLB1Q6P1J6 1458 aa6.62□□□□□ -1.35
RGPD6-207ENST00000463822 UACAQ9BZF9 1416 aa6.61□□□□□ -1.35
RGPD6-207ENST00000463822 EHBP1L1Q8N3D4 1523 aa6.61□□□□□ -1.35
RGPD6-207ENST00000463822 TROQ12816 1431 aaPredicted RBP6.61□□□□□ -1.35
RGPD6-207ENST00000463822 SAMD9Q5K651 1589 aa6.6□□□□□ -1.35
RGPD6-207ENST00000463822 SETD5Q9C0A6 1442 aa6.6□□□□□ -1.35
RGPD6-207ENST00000463822 KIAA0556O60303 1618 aa6.6□□□□□ -1.35
RGPD6-207ENST00000463822 CDK13Q14004 1512 aaKnown RBP6.6□□□□□ -1.35
RGPD6-207ENST00000463822 CTTNBP2Q8WZ74 1663 aa6.6□□□□□ -1.35
RGPD6-207ENST00000463822 CEP170Q5SW79 1584 aa6.59□□□□□ -1.35
RGPD6-207ENST00000463822 CLSPNQ9HAW4 1339 aa6.59□□□□□ -1.35
RGPD6-207ENST00000463822 ACIN1Q9UKV3 1341 aaKnown RBP6.59□□□□□ -1.35
RGPD6-207ENST00000463822 NUP153P49790 1475 aaKnown RBP6.59□□□□□ -1.36
RGPD6-207ENST00000463822 NEUROD1Q13562 356 aa6.58□□□□□ -1.36
RGPD6-207ENST00000463822 RAB3GAP2Q9H2M9 1393 aa6.58□□□□□ -1.36
RGPD6-207ENST00000463822 EFCAB2Q5VUJ9 269 aa6.58□□□□□ -1.36
RGPD6-207ENST00000463822 MIA2Q96PC5 1412 aa6.58□□□□□ -1.36
RGPD6-207ENST00000463822 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.57□□□□□ -1.36
RGPD6-207ENST00000463822 ZNF644Q9H582 1327 aaPredicted RBP6.55□□□□□ -1.36
RGPD6-207ENST00000463822 RSPH4AQ5TD94 716 aa6.55□□□□□ -1.36
RGPD6-207ENST00000463822 ANKRD30AQ9BXX3 1397 aa6.54□□□□□ -1.36
RGPD6-207ENST00000463822 CYB5RLQ6IPT4 315 aa6.54□□□□□ -1.36
RGPD6-207ENST00000463822 DHX57Q6P158 1386 aaKnown RBP6.54□□□□□ -1.36
RGPD6-207ENST00000463822 RAPGEF6Q8TEU7 1601 aa6.54□□□□□ -1.36
RGPD6-207ENST00000463822 ATP10BO94823 1461 aa6.54□□□□□ -1.36
RGPD6-207ENST00000463822 SLC4A1APQ9BWU0 796 aaKnown RBP6.54□□□□□ -1.36
RGPD6-207ENST00000463822 TONSLQ96HA7 1378 aa6.53□□□□□ -1.36
RGPD6-207ENST00000463822 HNRNPMP52272 730 aaKnown RBP eCLIP6.53□□□□□ -1.36
RGPD6-207ENST00000463822 SUPT6HQ7KZ85 1726 aaKnown RBP6.51□□□□□ -1.37
RGPD6-207ENST00000463822 HFM1A2PYH4 1435 aa6.51□□□□□ -1.37
RGPD6-207ENST00000463822 CFAP43Q8NDM7 1665 aa6.51□□□□□ -1.37
RGPD6-207ENST00000463822 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.5□□□□□ -1.37
RGPD6-207ENST00000463822 ZNF316A6NFI3 1004 aaPredicted RBP6.5□□□□□ -1.37
RGPD6-207ENST00000463822 SIN3AQ96ST3 1273 aa6.5□□□□□ -1.37
RGPD6-207ENST00000463822 TIMELESSQ9UNS1 1208 aa6.5□□□□□ -1.37
RGPD6-207ENST00000463822 ABCC2Q92887 1545 aa6.5□□□□□ -1.37
RGPD6-207ENST00000463822 ARHGEF11O15085 1522 aa6.5□□□□□ -1.37
RGPD6-207ENST00000463822 GPATCH8Q9UKJ3 1502 aaKnown RBP6.49□□□□□ -1.37
RGPD6-207ENST00000463822 DAPK1P53355 1430 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms