RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 POLA2Q14181 598 aa6.12□□□□□ -1.43
COL8A1-205ENST00000463753 IQSEC2Q5JU85 1478 aa6.12□□□□□ -1.43
COL8A1-205ENST00000463753 FBXO41Q8TF61 875 aa6.11□□□□□ -1.43
COL8A1-205ENST00000463753 TOP2BQ02880 1626 aa6.11□□□□□ -1.43
COL8A1-205ENST00000463753 CHD1O14646 1710 aa6.1□□□□□ -1.43
COL8A1-205ENST00000463753 MKRN4PQ13434 485 aaPredicted RBP6.09□□□□□ -1.43
COL8A1-205ENST00000463753 SYNJ1O43426 1573 aa6.09□□□□□ -1.43
COL8A1-205ENST00000463753 CEP164Q9UPV0 1460 aa6.09□□□□□ -1.44
COL8A1-205ENST00000463753 SOCS7O14512 581 aa6.08□□□□□ -1.44
COL8A1-205ENST00000463753 MAPKBP1O60336 1514 aa6.08□□□□□ -1.44
COL8A1-205ENST00000463753 ABCB7O75027 752 aa6.06□□□□□ -1.44
COL8A1-205ENST00000463753 CADPSQ9ULU8 1353 aa6.05□□□□□ -1.44
COL8A1-205ENST00000463753 SHROOM2Q13796 1616 aa6.05□□□□□ -1.44
COL8A1-205ENST00000463753 HRCP23327 699 aa6.04□□□□□ -1.44
COL8A1-205ENST00000463753 FBLN2P98095 1184 aa6.04□□□□□ -1.44
COL8A1-205ENST00000463753 GLI2P10070 1586 aa6.03□□□□□ -1.44
COL8A1-205ENST00000463753 HECW2Q9P2P5 1572 aa6.02□□□□□ -1.45
COL8A1-205ENST00000463753 EIF4G3O43432 1585 aaKnown RBP6.02□□□□□ -1.45
COL8A1-205ENST00000463753 PPARGC1BQ86YN6 1023 aaKnown RBP6.01□□□□□ -1.45
COL8A1-205ENST00000463753 PROM2Q8N271 834 aa6□□□□□ -1.45
COL8A1-205ENST00000463753 SPATA31D1Q6ZQQ2 1576 aa5.99□□□□□ -1.45
COL8A1-205ENST00000463753 CFTRP13569 1480 aa5.99□□□□□ -1.45
COL8A1-205ENST00000463753 MAGI1Q96QZ7 1491 aaPredicted RBP5.99□□□□□ -1.45
COL8A1-205ENST00000463753 TARBP1Q13395 1621 aaKnown RBP5.99□□□□□ -1.45
COL8A1-205ENST00000463753 LMTK3Q96Q04 1460 aa5.98□□□□□ -1.45
COL8A1-205ENST00000463753 POTEHQ6S545 545 aa5.98□□□□□ -1.45
COL8A1-205ENST00000463753 KIAA0586Q9BVV6 1533 aa5.98□□□□□ -1.45
COL8A1-205ENST00000463753 SPDYE2BA6NHP3 402 aa5.95□□□□□ -1.46
COL8A1-205ENST00000463753 SPDYE6P0CI01 402 aa5.95□□□□□ -1.46
COL8A1-205ENST00000463753 SPDYE2Q495Y8 402 aa5.95□□□□□ -1.46
COL8A1-205ENST00000463753 SSUH2Q9Y2M2 353 aa5.95□□□□□ -1.46
COL8A1-205ENST00000463753 DIP2BQ9P265 1576 aa5.94□□□□□ -1.46
COL8A1-205ENST00000463753 DNMBPQ6XZF7 1577 aa5.94□□□□□ -1.46
COL8A1-205ENST00000463753 PRKCSHP14314 528 aaPredicted RBP5.93□□□□□ -1.46
COL8A1-205ENST00000463753 ABCC10Q5T3U5 1492 aa5.93□□□□□ -1.46
COL8A1-205ENST00000463753 FANCD2Q9BXW9 1451 aa5.93□□□□□ -1.46
COL8A1-205ENST00000463753 URB2Q14146 1524 aaKnown RBP5.93□□□□□ -1.46
COL8A1-205ENST00000463753 RBM42Q9BTD8 480 aaKnown RBP5.91□□□□□ -1.46
COL8A1-205ENST00000463753 SPDYE4A6NLX3 237 aa5.91□□□□□ -1.46
COL8A1-205ENST00000463753 ZNF608Q9ULD9 1512 aaPredicted RBP5.9□□□□□ -1.47
COL8A1-205ENST00000463753 TTBK1Q5TCY1 1321 aaPredicted RBP5.89□□□□□ -1.47
COL8A1-205ENST00000463753 FKBP8Q14318 412 aa5.88□□□□□ -1.47
COL8A1-205ENST00000463753 AKT1S1Q96B36 256 aa5.88□□□□□ -1.47
COL8A1-205ENST00000463753 PBRM1Q86U86 1689 aa5.87□□□□□ -1.47
COL8A1-205ENST00000463753 BCL11AQ9H165 835 aa5.86□□□□□ -1.47
COL8A1-205ENST00000463753 PPRC1Q5VV67 1664 aaKnown RBP5.86□□□□□ -1.47
COL8A1-205ENST00000463753 GAPVD1Q14C86 1478 aa5.85□□□□□ -1.47
COL8A1-205ENST00000463753 SYNJ2O15056 1496 aa5.85□□□□□ -1.47
COL8A1-205ENST00000463753 ADGRL1O94910 1474 aa5.85□□□□□ -1.47
COL8A1-205ENST00000463753 ADAMTSL3P82987 1691 aa5.84□□□□□ -1.47
COL8A1-205ENST00000463753 ZNF692Q9BU19 519 aaPredicted RBP5.84□□□□□ -1.48
COL8A1-205ENST00000463753 PCGF6Q9BYE7 350 aa5.82□□□□□ -1.48
COL8A1-205ENST00000463753 MAP3K4Q9Y6R4 1608 aa5.82□□□□□ -1.48
COL8A1-205ENST00000463753 TOPBP1Q92547 1522 aa5.81□□□□□ -1.48
COL8A1-205ENST00000463753 FAM9AQ8IZU1 332 aaPredicted RBP5.8□□□□□ -1.48
COL8A1-205ENST00000463753 KDM4FA0A1W2PPD8 638 aa5.8□□□□□ -1.48
COL8A1-205ENST00000463753 TEX14Q8IWB6 1497 aa5.8□□□□□ -1.48
COL8A1-205ENST00000463753 SNAPC4Q5SXM2 1469 aa5.79□□□□□ -1.48
COL8A1-205ENST00000463753 NUP160Q12769 1436 aa5.79□□□□□ -1.48
COL8A1-205ENST00000463753 PCF11O94913 1555 aaKnown RBP5.78□□□□□ -1.48
COL8A1-205ENST00000463753 REM2Q8IYK8 340 aaPredicted RBP5.77□□□□□ -1.49
COL8A1-205ENST00000463753 GRIN2BQ13224 1484 aa5.76□□□□□ -1.49
COL8A1-205ENST00000463753 ABCA5Q8WWZ7 1642 aa5.76□□□□□ -1.49
COL8A1-205ENST00000463753 STAG3Q9UJ98 1225 aa5.76□□□□□ -1.49
COL8A1-205ENST00000463753 CEP170Q5SW79 1584 aa5.76□□□□□ -1.49
COL8A1-205ENST00000463753 PHLDB1Q86UU1 1377 aa5.76□□□□□ -1.49
COL8A1-205ENST00000463753 UHRF1BP1LA0JNW5 1464 aa5.76□□□□□ -1.49
COL8A1-205ENST00000463753 FBXO3Q9UK99 471 aa5.75□□□□□ -1.49
COL8A1-205ENST00000463753 TOP2AP11388 1531 aaKnown RBP5.75□□□□□ -1.49
COL8A1-205ENST00000463753 CFAP43Q8NDM7 1665 aa5.74□□□□□ -1.49
COL8A1-205ENST00000463753 MROH2BQ7Z745 1585 aa5.73□□□□□ -1.49
COL8A1-205ENST00000463753 SPDYE1Q8NFV5 336 aaPredicted RBP5.73□□□□□ -1.49
COL8A1-205ENST00000463753 ERICH6Q7L0X2 663 aa5.73□□□□□ -1.49
COL8A1-205ENST00000463753 EPRSP07814 1512 aaKnown RBP5.72□□□□□ -1.49
COL8A1-205ENST00000463753 PTPRTO14522 1441 aa5.71□□□□□ -1.5
COL8A1-205ENST00000463753 GTF3C3Q9Y5Q9 886 aa5.71□□□□□ -1.5
COL8A1-205ENST00000463753 PLB1Q6P1J6 1458 aa5.71□□□□□ -1.5
COL8A1-205ENST00000463753 BCORL1Q5H9F3 1711 aa5.71□□□□□ -1.5
COL8A1-205ENST00000463753 CENPBP07199 599 aaPredicted RBP5.7□□□□□ -1.5
COL8A1-205ENST00000463753 CYB5RLQ6IPT4 315 aa5.7□□□□□ -1.5
COL8A1-205ENST00000463753 ADAMTS12P58397 1594 aa5.7□□□□□ -1.5
COL8A1-205ENST00000463753 MAGI3Q5TCQ9 1506 aa5.7□□□□□ -1.5
COL8A1-205ENST00000463753 PITPNM1O00562 1244 aa5.7□□□□□ -1.5
COL8A1-205ENST00000463753 PREX1Q8TCU6 1659 aa5.69□□□□□ -1.5
COL8A1-205ENST00000463753 ADCY10Q96PN6 1610 aa5.68□□□□□ -1.5
COL8A1-205ENST00000463753 ACIN1Q9UKV3 1341 aaKnown RBP5.68□□□□□ -1.5
COL8A1-205ENST00000463753 ARAP3Q8WWN8 1544 aa5.68□□□□□ -1.5
COL8A1-205ENST00000463753 NEUROD1Q13562 356 aa5.67□□□□□ -1.5
COL8A1-205ENST00000463753 FXR2P51116 673 aaKnown RBP eCLIP5.67□□□□□ -1.5
COL8A1-205ENST00000463753 LTBP4Q8N2S1 1624 aa5.66□□□□□ -1.5
COL8A1-205ENST00000463753 ERICH3Q5RHP9 1530 aa5.66□□□□□ -1.5
COL8A1-205ENST00000463753 TTC37Q6PGP7 1564 aa5.66□□□□□ -1.5
COL8A1-205ENST00000463753 VASPP50552 380 aaPredicted RBP5.65□□□□□ -1.5
COL8A1-205ENST00000463753 ABCA10Q8WWZ4 1543 aa5.64□□□□□ -1.51
COL8A1-205ENST00000463753 POLA1P09884 1462 aaPredicted RBP5.63□□□□□ -1.51
COL8A1-205ENST00000463753 GRIN2AQ12879 1464 aa5.63□□□□□ -1.51
COL8A1-205ENST00000463753 CREBZFQ9NS37 354 aa5.63□□□□□ -1.51
COL8A1-205ENST00000463753 FER1L4A9Z1Z3 1794 aa5.63□□□□□ -1.51
COL8A1-205ENST00000463753 RUSC2Q8N2Y8 1516 aa5.63□□□□□ -1.51
COL8A1-205ENST00000463753 CHRDL2Q6WN34 429 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms