RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 JPH4Q96JJ6 628 aa35.65■■■■□ 3.3
PDLIM4-205ENST00000463615 PRG4Q92954 1404 aaPredicted RBP35.63■■■■□ 3.29
PDLIM4-205ENST00000463615 KIAA0586Q9BVV6 1533 aa35.57■■■■□ 3.28
PDLIM4-205ENST00000463615 CARMIL1Q5VZK9 1371 aa35.51■■■■□ 3.28
PDLIM4-205ENST00000463615 RAPGEF2Q9Y4G8 1499 aa35.23■■■■□ 3.23
PDLIM4-205ENST00000463615 IQGAP2Q13576 1575 aa35.21■■■■□ 3.23
PDLIM4-205ENST00000463615 ADCY10Q96PN6 1610 aa35.17■■■■□ 3.22
PDLIM4-205ENST00000463615 CARMIL2Q6F5E8 1435 aa35.16■■■■□ 3.22
PDLIM4-205ENST00000463615 MAPKBP1O60336 1514 aa35.16■■■■□ 3.22
PDLIM4-205ENST00000463615 NPM1P06748 294 aaKnown RBP eCLIP35.12■■■■□ 3.21
PDLIM4-205ENST00000463615 PTPRGP23470 1445 aa35.12■■■■□ 3.21
PDLIM4-205ENST00000463615 TNIKQ9UKE5 1360 aa35.12■■■■□ 3.21
PDLIM4-205ENST00000463615 KIF13AQ9H1H9 1805 aa35.09■■■■□ 3.21
PDLIM4-205ENST00000463615 UGGT2Q9NYU1 1516 aa35.06■■■■□ 3.2
PDLIM4-205ENST00000463615 ABCC10Q5T3U5 1492 aa35.06■■■■□ 3.2
PDLIM4-205ENST00000463615 DISP1Q96F81 1524 aa35.05■■■■□ 3.2
PDLIM4-205ENST00000463615 PRXQ9BXM0 1461 aa35■■■■□ 3.19
PDLIM4-205ENST00000463615 UHRF1BP1LA0JNW5 1464 aa34.96■■■■□ 3.19
PDLIM4-205ENST00000463615 DIP2BQ9P265 1576 aa34.96■■■■□ 3.19
PDLIM4-205ENST00000463615 ABCC2Q92887 1545 aa34.93■■■■□ 3.18
PDLIM4-205ENST00000463615 FAM69CQ0P6D2 419 aa34.93■■■■□ 3.18
PDLIM4-205ENST00000463615 KIAA0556O60303 1618 aa34.89■■■■□ 3.18
PDLIM4-205ENST00000463615 UACAQ9BZF9 1416 aa34.89■■■■□ 3.18
PDLIM4-205ENST00000463615 CTTNBP2Q8WZ74 1663 aa34.88■■■■□ 3.17
PDLIM4-205ENST00000463615 TTBK1Q5TCY1 1321 aaPredicted RBP34.82■■■■□ 3.17
PDLIM4-205ENST00000463615 GOLGA3Q08378 1498 aa34.78■■■■□ 3.16
PDLIM4-205ENST00000463615 PLB1Q6P1J6 1458 aa34.78■■■■□ 3.16
PDLIM4-205ENST00000463615 KDM5BQ9UGL1 1544 aa34.77■■■■□ 3.16
PDLIM4-205ENST00000463615 ASXL2Q76L83 1435 aa34.74■■■■□ 3.15
PDLIM4-205ENST00000463615 CSRNP3Q8WYN3 585 aa34.74■■■■□ 3.15
PDLIM4-205ENST00000463615 EEA1Q15075 1411 aa34.72■■■■□ 3.15
PDLIM4-205ENST00000463615 GLI2P10070 1586 aa34.7■■■■□ 3.14
PDLIM4-205ENST00000463615 ZCCHC11Q5TAX3 1644 aaKnown RBP34.61■■■■□ 3.13
PDLIM4-205ENST00000463615 ABCA8O94911 1581 aa34.59■■■■□ 3.13
PDLIM4-205ENST00000463615 EPRSP07814 1512 aaKnown RBP34.55■■■■□ 3.12
PDLIM4-205ENST00000463615 TSPOAP1O95153 1857 aa34.54■■■■□ 3.12
PDLIM4-205ENST00000463615 KDM6BO15054 1643 aa34.52■■■■□ 3.12
PDLIM4-205ENST00000463615 PPRC1Q5VV67 1664 aaKnown RBP34.49■■■■□ 3.11
PDLIM4-205ENST00000463615 WDR7Q9Y4E6 1490 aa34.47■■■■□ 3.11
PDLIM4-205ENST00000463615 SAMD9Q5K651 1589 aa34.47■■■■□ 3.11
PDLIM4-205ENST00000463615 MAP3K4Q9Y6R4 1608 aa34.45■■■■□ 3.11
PDLIM4-205ENST00000463615 AEBP2Q6ZN18 517 aaPredicted RBP34.41■■■■□ 3.1
PDLIM4-205ENST00000463615 FAM9AQ8IZU1 332 aaPredicted RBP34.39■■■■□ 3.1
PDLIM4-205ENST00000463615 KIF21BO75037 1637 aa34.38■■■■□ 3.09
PDLIM4-205ENST00000463615 TEX14Q8IWB6 1497 aa34.35■■■■□ 3.09
PDLIM4-205ENST00000463615 CHIC1Q5VXU3 224 aa34.34■■■■□ 3.09
PDLIM4-205ENST00000463615 P3H3Q8IVL6 736 aa34.33■■■■□ 3.09
PDLIM4-205ENST00000463615 ATP10BO94823 1461 aa34.28■■■■□ 3.08
PDLIM4-205ENST00000463615 COL17A1Q9UMD9 1497 aaPredicted RBP34.25■■■■□ 3.07
PDLIM4-205ENST00000463615 CFAP43Q8NDM7 1665 aa34.25■■■■□ 3.07
PDLIM4-205ENST00000463615 MAGI3Q5TCQ9 1506 aa34.25■■■■□ 3.07
PDLIM4-205ENST00000463615 RAPGEF6Q8TEU7 1601 aa34.22■■■■□ 3.07
PDLIM4-205ENST00000463615 CD109Q6YHK3 1445 aa34.21■■■■□ 3.07
PDLIM4-205ENST00000463615 EFCAB5A4FU69 1503 aa34.2■■■■□ 3.06
PDLIM4-205ENST00000463615 KCNH8Q96L42 1107 aa34.18■■■■□ 3.06
PDLIM4-205ENST00000463615 FHOD3Q2V2M9 1422 aa34.16■■■■□ 3.06
PDLIM4-205ENST00000463615 NUP153P49790 1475 aaKnown RBP34.14■■■■□ 3.06
PDLIM4-205ENST00000463615 ARID3CA6NKF2 412 aa34.08■■■■□ 3.05
PDLIM4-205ENST00000463615 ABCA9Q8IUA7 1624 aa34.06■■■■□ 3.04
PDLIM4-205ENST00000463615 KDM4FA0A1W2PPD8 638 aa34.06■■■■□ 3.04
PDLIM4-205ENST00000463615 RANGAP1P46060 587 aaPredicted RBP34.06■■■■□ 3.04
PDLIM4-205ENST00000463615 UBTFP17480 764 aaKnown RBP33.98■■■■□ 3.03
PDLIM4-205ENST00000463615 ARAP3Q8WWN8 1544 aa33.98■■■■□ 3.03
PDLIM4-205ENST00000463615 PHLDB1Q86UU1 1377 aa33.98■■■■□ 3.03
PDLIM4-205ENST00000463615 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.94■■■■□ 3.02
PDLIM4-205ENST00000463615 HNRNPUL2Q1KMD3 747 aaKnown RBP33.94■■■■□ 3.02
PDLIM4-205ENST00000463615 ARHGAP35Q9NRY4 1499 aa33.9■■■■□ 3.02
PDLIM4-205ENST00000463615 PLEKHD1A6NEE1 506 aa33.89■■■■□ 3.02
PDLIM4-205ENST00000463615 NEO1Q92859 1461 aa33.88■■■■□ 3.01
PDLIM4-205ENST00000463615 FMN1Q68DA7 1419 aa33.87■■■■□ 3.01
PDLIM4-205ENST00000463615 ADGRL1O94910 1474 aa33.86■■■■□ 3.01
PDLIM4-205ENST00000463615 EHMT2Q96KQ7 1210 aa33.81■■■■□ 3
PDLIM4-205ENST00000463615 CDK13Q14004 1512 aaKnown RBP33.76■■■■□ 3
PDLIM4-205ENST00000463615 HECW1Q76N89 1606 aa33.75■■■□□ 2.99
PDLIM4-205ENST00000463615 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.75■■■□□ 2.99
PDLIM4-205ENST00000463615 TTC37Q6PGP7 1564 aa33.67■■■□□ 2.98
PDLIM4-205ENST00000463615 FRMPD1Q5SYB0 1578 aa33.65■■■□□ 2.98
PDLIM4-205ENST00000463615 RAPGEF3O95398 923 aa33.65■■■□□ 2.98
PDLIM4-205ENST00000463615 CFAP74Q9C0B2 1584 aa33.64■■■□□ 2.98
PDLIM4-205ENST00000463615 FANCAO15360 1455 aa33.63■■■□□ 2.97
PDLIM4-205ENST00000463615 AKNAQ7Z591 1439 aa33.63■■■□□ 2.97
PDLIM4-205ENST00000463615 CDK11AQ9UQ88 783 aaPredicted RBP33.62■■■□□ 2.97
PDLIM4-205ENST00000463615 DENND4BO75064 1496 aaPredicted RBP33.59■■■□□ 2.97
PDLIM4-205ENST00000463615 PLCH2O75038 1416 aa33.58■■■□□ 2.97
PDLIM4-205ENST00000463615 ATP1B4Q9UN42 357 aaPredicted RBP33.57■■■□□ 2.96
PDLIM4-205ENST00000463615 TROQ12816 1431 aaPredicted RBP33.54■■■□□ 2.96
PDLIM4-205ENST00000463615 CASKIN1Q8WXD9 1431 aa33.54■■■□□ 2.96
PDLIM4-205ENST00000463615 RICTORQ6R327 1708 aa33.54■■■□□ 2.96
PDLIM4-205ENST00000463615 LRRIQ1Q96JM4 1722 aa33.51■■■□□ 2.96
PDLIM4-205ENST00000463615 ZMYM4Q5VZL5 1548 aa33.48■■■□□ 2.95
PDLIM4-205ENST00000463615 CCDC18Q5T9S5 1454 aa33.48■■■□□ 2.95
PDLIM4-205ENST00000463615 KIF14Q15058 1648 aa33.47■■■□□ 2.95
PDLIM4-205ENST00000463615 ARHGEF40Q8TER5 1519 aa33.47■■■□□ 2.95
PDLIM4-205ENST00000463615 PCF11O94913 1555 aaKnown RBP33.47■■■□□ 2.95
PDLIM4-205ENST00000463615 CLIP1P30622 1438 aa33.46■■■□□ 2.95
PDLIM4-205ENST00000463615 MYO5CQ9NQX4 1742 aa33.44■■■□□ 2.94
PDLIM4-205ENST00000463615 MAGI2Q86UL8 1455 aa33.43■■■□□ 2.94
PDLIM4-205ENST00000463615 EFCAB2Q5VUJ9 269 aa33.42■■■□□ 2.94
PDLIM4-205ENST00000463615 FYCO1Q9BQS8 1478 aa33.42■■■□□ 2.94
PDLIM4-205ENST00000463615 ADAMTSL3P82987 1691 aa33.42■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms