RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 ARHGAP35Q9NRY4 1499 aa29.94■■■□□ 2.38
CCDC78-206ENST00000463539 VPS8Q8N3P4 1428 aa29.92■■■□□ 2.38
CCDC78-206ENST00000463539 ARAP1Q96P48 1450 aa29.91■■■□□ 2.38
CCDC78-206ENST00000463539 CHMP7Q8WUX9 453 aaPredicted RBP29.89■■■□□ 2.38
CCDC78-206ENST00000463539 FBLN2P98095 1184 aa29.83■■■□□ 2.37
CCDC78-206ENST00000463539 EFCAB5A4FU69 1503 aa29.83■■■□□ 2.37
CCDC78-206ENST00000463539 IQGAP2Q13576 1575 aa29.79■■■□□ 2.36
CCDC78-206ENST00000463539 KIAA0586Q9BVV6 1533 aa29.77■■■□□ 2.36
CCDC78-206ENST00000463539 NUP160Q12769 1436 aa29.72■■■□□ 2.35
CCDC78-206ENST00000463539 CEP170Q5SW79 1584 aa29.71■■■□□ 2.35
CCDC78-206ENST00000463539 SAMD9Q5K651 1589 aa29.71■■■□□ 2.35
CCDC78-206ENST00000463539 P3H3Q8IVL6 736 aa29.71■■■□□ 2.35
CCDC78-206ENST00000463539 FHOD3Q2V2M9 1422 aa29.7■■■□□ 2.34
CCDC78-206ENST00000463539 PPARGC1BQ86YN6 1023 aaKnown RBP29.65■■■□□ 2.34
CCDC78-206ENST00000463539 UGGT2Q9NYU1 1516 aa29.65■■■□□ 2.34
CCDC78-206ENST00000463539 APLP2Q06481 763 aa29.63■■■□□ 2.33
CCDC78-206ENST00000463539 CHD1O14646 1710 aa29.59■■■□□ 2.33
CCDC78-206ENST00000463539 FMN1Q68DA7 1419 aa29.57■■■□□ 2.32
CCDC78-206ENST00000463539 TRIM26Q12899 539 aaPredicted RBP29.56■■■□□ 2.32
CCDC78-206ENST00000463539 PCF11O94913 1555 aaKnown RBP29.51■■■□□ 2.31
CCDC78-206ENST00000463539 DISP1Q96F81 1524 aa29.5■■■□□ 2.31
CCDC78-206ENST00000463539 PCGF6Q9BYE7 350 aa29.5■■■□□ 2.31
CCDC78-206ENST00000463539 KIAA0556O60303 1618 aa29.49■■■□□ 2.31
CCDC78-206ENST00000463539 CASKIN1Q8WXD9 1431 aa29.49■■■□□ 2.31
CCDC78-206ENST00000463539 TTBK1Q5TCY1 1321 aaPredicted RBP29.48■■■□□ 2.31
CCDC78-206ENST00000463539 FYCO1Q9BQS8 1478 aa29.48■■■□□ 2.31
CCDC78-206ENST00000463539 JPH4Q96JJ6 628 aa29.48■■■□□ 2.31
CCDC78-206ENST00000463539 CARMIL2Q6F5E8 1435 aa29.42■■■□□ 2.3
CCDC78-206ENST00000463539 ATP1B4Q9UN42 357 aaPredicted RBP29.4■■■□□ 2.3
CCDC78-206ENST00000463539 MAP3K1Q13233 1512 aa29.4■■■□□ 2.3
CCDC78-206ENST00000463539 TIAM1Q13009 1591 aa29.37■■■□□ 2.29
CCDC78-206ENST00000463539 KANK4Q5T7N3 995 aaPredicted RBP29.34■■■□□ 2.29
CCDC78-206ENST00000463539 PRG4Q92954 1404 aaPredicted RBP29.32■■■□□ 2.28
CCDC78-206ENST00000463539 CLASP1Q7Z460 1538 aa29.31■■■□□ 2.28
CCDC78-206ENST00000463539 CFAP43Q8NDM7 1665 aa29.3■■■□□ 2.28
CCDC78-206ENST00000463539 SHROOM2Q13796 1616 aa29.29■■■□□ 2.28
CCDC78-206ENST00000463539 HECW1Q76N89 1606 aa29.26■■■□□ 2.27
CCDC78-206ENST00000463539 LRRC9Q6ZRR7 1453 aa29.25■■■□□ 2.27
CCDC78-206ENST00000463539 CCDC18Q5T9S5 1454 aa29.2■■■□□ 2.27
CCDC78-206ENST00000463539 RAPGEF6Q8TEU7 1601 aa29.17■■■□□ 2.26
CCDC78-206ENST00000463539 EPRSP07814 1512 aaKnown RBP29.16■■■□□ 2.26
CCDC78-206ENST00000463539 LRRIQ1Q96JM4 1722 aa29.15■■■□□ 2.26
CCDC78-206ENST00000463539 PLB1Q6P1J6 1458 aa29.14■■■□□ 2.26
CCDC78-206ENST00000463539 NUP153P49790 1475 aaKnown RBP29.13■■■□□ 2.25
CCDC78-206ENST00000463539 PTPRGP23470 1445 aa29.12■■■□□ 2.25
CCDC78-206ENST00000463539 OSCARQ8IYS5 282 aa29.11■■■□□ 2.25
CCDC78-206ENST00000463539 MTUS2Q5JR59 1369 aa29.09■■■□□ 2.25
CCDC78-206ENST00000463539 ERCC6L2Q5T890 1561 aa29.09■■■□□ 2.25
CCDC78-206ENST00000463539 CDK13Q14004 1512 aaKnown RBP29.08■■■□□ 2.25
CCDC78-206ENST00000463539 ABCA8O94911 1581 aa29.06■■■□□ 2.24
CCDC78-206ENST00000463539 ARID3CA6NKF2 412 aa29.06■■■□□ 2.24
CCDC78-206ENST00000463539 EHBP1L1Q8N3D4 1523 aa29.04■■■□□ 2.24
CCDC78-206ENST00000463539 MAGI3Q5TCQ9 1506 aa28.99■■■□□ 2.23
CCDC78-206ENST00000463539 RRBP1Q9P2E9 1410 aaKnown RBP28.98■■■□□ 2.23
CCDC78-206ENST00000463539 PHLDB1Q86UU1 1377 aa28.97■■■□□ 2.23
CCDC78-206ENST00000463539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.97■■■□□ 2.23
CCDC78-206ENST00000463539 HNRNPUL2Q1KMD3 747 aaKnown RBP28.97■■■□□ 2.23
CCDC78-206ENST00000463539 UACAQ9BZF9 1416 aa28.95■■■□□ 2.23
CCDC78-206ENST00000463539 CDK11AQ9UQ88 783 aaPredicted RBP28.94■■■□□ 2.22
CCDC78-206ENST00000463539 CCNB3Q8WWL7 1395 aa28.92■■■□□ 2.22
CCDC78-206ENST00000463539 NCOA2Q15596 1464 aa28.91■■■□□ 2.22
CCDC78-206ENST00000463539 SUPT6HQ7KZ85 1726 aaKnown RBP28.91■■■□□ 2.22
CCDC78-206ENST00000463539 ATP10BO94823 1461 aa28.88■■■□□ 2.21
CCDC78-206ENST00000463539 ABCC2Q92887 1545 aa28.87■■■□□ 2.21
CCDC78-206ENST00000463539 ARHGEF11O15085 1522 aa28.85■■■□□ 2.21
CCDC78-206ENST00000463539 TROQ12816 1431 aaPredicted RBP28.83■■■□□ 2.21
CCDC78-206ENST00000463539 UHRF1BP1LA0JNW5 1464 aa28.8■■■□□ 2.2
CCDC78-206ENST00000463539 MYOM3Q5VTT5 1437 aa28.8■■■□□ 2.2
CCDC78-206ENST00000463539 FGD6Q6ZV73 1430 aa28.79■■■□□ 2.2
CCDC78-206ENST00000463539 PLEKHD1A6NEE1 506 aa28.77■■■□□ 2.2
CCDC78-206ENST00000463539 FAM50AQ14320 339 aaKnown RBP28.73■■■□□ 2.19
CCDC78-206ENST00000463539 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.7■■■□□ 2.19
CCDC78-206ENST00000463539 ADCY10Q96PN6 1610 aa28.7■■■□□ 2.18
CCDC78-206ENST00000463539 KDM5BQ9UGL1 1544 aa28.68■■■□□ 2.18
CCDC78-206ENST00000463539 KIF14Q15058 1648 aa28.66■■■□□ 2.18
CCDC78-206ENST00000463539 MIA2Q96PC5 1412 aa28.65■■■□□ 2.18
CCDC78-206ENST00000463539 ITGAEP38570 1179 aa28.64■■■□□ 2.18
CCDC78-206ENST00000463539 ZCCHC11Q5TAX3 1644 aaKnown RBP28.63■■■□□ 2.17
CCDC78-206ENST00000463539 PTPN23Q9H3S7 1636 aa28.61■■■□□ 2.17
CCDC78-206ENST00000463539 TCOF1Q13428 1488 aaKnown RBP28.59■■■□□ 2.17
CCDC78-206ENST00000463539 ABCC10Q5T3U5 1492 aa28.57■■■□□ 2.16
CCDC78-206ENST00000463539 GPATCH8Q9UKJ3 1502 aaKnown RBP28.56■■■□□ 2.16
CCDC78-206ENST00000463539 ITSN2Q9NZM3 1697 aa28.54■■■□□ 2.16
CCDC78-206ENST00000463539 HRCP23327 699 aa28.51■■■□□ 2.15
CCDC78-206ENST00000463539 CFDP1Q9UEE9 299 aaPredicted RBP28.5■■■□□ 2.15
CCDC78-206ENST00000463539 RIMBP3CA6NJZ7 1639 aa28.45■■■□□ 2.14
CCDC78-206ENST00000463539 RIMBP3BA6NNM3 1639 aa28.45■■■□□ 2.14
CCDC78-206ENST00000463539 RIMBP3Q9UFD9 1639 aa28.45■■■□□ 2.14
CCDC78-206ENST00000463539 NPM1P06748 294 aaKnown RBP eCLIP28.44■■■□□ 2.14
CCDC78-206ENST00000463539 KCNH8Q96L42 1107 aa28.44■■■□□ 2.14
CCDC78-206ENST00000463539 WDR7Q9Y4E6 1490 aa28.44■■■□□ 2.14
CCDC78-206ENST00000463539 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.43■■■□□ 2.14
CCDC78-206ENST00000463539 CCER1Q8TC90 406 aaPredicted RBP28.43■■■□□ 2.14
CCDC78-206ENST00000463539 CDC42BPAQ5VT25 1732 aa28.43■■■□□ 2.14
CCDC78-206ENST00000463539 CAMSAP2Q08AD1 1489 aa28.42■■■□□ 2.14
CCDC78-206ENST00000463539 TTC37Q6PGP7 1564 aa28.42■■■□□ 2.14
CCDC78-206ENST00000463539 ZNF644Q9H582 1327 aaPredicted RBP28.42■■■□□ 2.14
CCDC78-206ENST00000463539 PTPRKQ15262 1439 aa28.42■■■□□ 2.14
CCDC78-206ENST00000463539 ASXL2Q76L83 1435 aa28.39■■■□□ 2.13
CCDC78-206ENST00000463539 ZNF777Q9ULD5 760 aaPredicted RBP28.39■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 195.3 ms