RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 KIAA0586Q9BVV6 1533 aa22.08■■□□□ 1.13
R3HDM1-213ENST00000463230 RAPGEF2Q9Y4G8 1499 aa22.05■■□□□ 1.12
R3HDM1-213ENST00000463230 EEA1Q15075 1411 aa22.03■■□□□ 1.12
R3HDM1-213ENST00000463230 CYB5RLQ6IPT4 315 aa22.02■■□□□ 1.12
R3HDM1-213ENST00000463230 JPH4Q96JJ6 628 aa22■■□□□ 1.11
R3HDM1-213ENST00000463230 PRG4Q92954 1404 aaPredicted RBP21.98■■□□□ 1.11
R3HDM1-213ENST00000463230 ERCC6L2Q5T890 1561 aa21.97■■□□□ 1.11
R3HDM1-213ENST00000463230 PRXQ9BXM0 1461 aa21.97■■□□□ 1.11
R3HDM1-213ENST00000463230 IQGAP2Q13576 1575 aa21.95■■□□□ 1.1
R3HDM1-213ENST00000463230 CSRNP3Q8WYN3 585 aa21.89■■□□□ 1.09
R3HDM1-213ENST00000463230 CTTNBP2Q8WZ74 1663 aa21.87■■□□□ 1.09
R3HDM1-213ENST00000463230 CARMIL2Q6F5E8 1435 aa21.85■■□□□ 1.09
R3HDM1-213ENST00000463230 UGGT2Q9NYU1 1516 aa21.85■■□□□ 1.09
R3HDM1-213ENST00000463230 KIF21BO75037 1637 aa21.77■■□□□ 1.08
R3HDM1-213ENST00000463230 TNIKQ9UKE5 1360 aa21.76■■□□□ 1.07
R3HDM1-213ENST00000463230 DISP1Q96F81 1524 aa21.76■■□□□ 1.07
R3HDM1-213ENST00000463230 GOLGA3Q08378 1498 aa21.74■■□□□ 1.07
R3HDM1-213ENST00000463230 KIAA0556O60303 1618 aa21.73■■□□□ 1.07
R3HDM1-213ENST00000463230 PHF23Q9BUL5 403 aaPredicted RBP21.73■■□□□ 1.07
R3HDM1-213ENST00000463230 PTPRGP23470 1445 aa21.73■■□□□ 1.07
R3HDM1-213ENST00000463230 ADCY10Q96PN6 1610 aa21.68■■□□□ 1.06
R3HDM1-213ENST00000463230 UHRF1BP1LA0JNW5 1464 aa21.65■■□□□ 1.06
R3HDM1-213ENST00000463230 FAM9AQ8IZU1 332 aaPredicted RBP21.65■■□□□ 1.06
R3HDM1-213ENST00000463230 MAPKBP1O60336 1514 aa21.61■■□□□ 1.05
R3HDM1-213ENST00000463230 NPM1P06748 294 aaKnown RBP eCLIP21.61■■□□□ 1.05
R3HDM1-213ENST00000463230 UACAQ9BZF9 1416 aa21.6■■□□□ 1.05
R3HDM1-213ENST00000463230 SAMD9Q5K651 1589 aa21.59■■□□□ 1.05
R3HDM1-213ENST00000463230 ABCC2Q92887 1545 aa21.58■■□□□ 1.05
R3HDM1-213ENST00000463230 TRHP20396 242 aaPredicted RBP21.58■■□□□ 1.05
R3HDM1-213ENST00000463230 EFCAB5A4FU69 1503 aa21.53■■□□□ 1.04
R3HDM1-213ENST00000463230 KDM5BQ9UGL1 1544 aa21.51■■□□□ 1.03
R3HDM1-213ENST00000463230 ABCA8O94911 1581 aa21.51■■□□□ 1.03
R3HDM1-213ENST00000463230 TTBK1Q5TCY1 1321 aaPredicted RBP21.49■■□□□ 1.03
R3HDM1-213ENST00000463230 ABCC10Q5T3U5 1492 aa21.47■■□□□ 1.03
R3HDM1-213ENST00000463230 KIF13AQ9H1H9 1805 aa21.47■■□□□ 1.03
R3HDM1-213ENST00000463230 PLB1Q6P1J6 1458 aa21.45■■□□□ 1.02
R3HDM1-213ENST00000463230 UBTFP17480 764 aaKnown RBP21.44■■□□□ 1.02
R3HDM1-213ENST00000463230 DIP2BQ9P265 1576 aa21.44■■□□□ 1.02
R3HDM1-213ENST00000463230 ZCCHC11Q5TAX3 1644 aaKnown RBP21.43■■□□□ 1.02
R3HDM1-213ENST00000463230 ASXL2Q76L83 1435 aa21.4■■□□□ 1.02
R3HDM1-213ENST00000463230 RAPGEF6Q8TEU7 1601 aa21.38■■□□□ 1.01
R3HDM1-213ENST00000463230 P3H3Q8IVL6 736 aa21.37■■□□□ 1.01
R3HDM1-213ENST00000463230 GLI2P10070 1586 aa21.37■■□□□ 1.01
R3HDM1-213ENST00000463230 FHOD3Q2V2M9 1422 aa21.36■■□□□ 1.01
R3HDM1-213ENST00000463230 FAM69CQ0P6D2 419 aa21.35■■□□□ 1.01
R3HDM1-213ENST00000463230 WDR7Q9Y4E6 1490 aa21.32■■□□□ 1
R3HDM1-213ENST00000463230 ARHGAP35Q9NRY4 1499 aa21.31■■□□□ 1
R3HDM1-213ENST00000463230 RANGAP1P46060 587 aaPredicted RBP21.3■■□□□ 1
R3HDM1-213ENST00000463230 EPRSP07814 1512 aaKnown RBP21.3■■□□□ 1
R3HDM1-213ENST00000463230 FMN1Q68DA7 1419 aa21.29■■□□□ 1
R3HDM1-213ENST00000463230 ATP10BO94823 1461 aa21.28■■□□□ 1
R3HDM1-213ENST00000463230 EHMT2Q96KQ7 1210 aa21.28■■□□□ 1
R3HDM1-213ENST00000463230 NUP153P49790 1475 aaKnown RBP21.26■□□□□ 0.99
R3HDM1-213ENST00000463230 MAP3K4Q9Y6R4 1608 aa21.24■□□□□ 0.99
R3HDM1-213ENST00000463230 HECW1Q76N89 1606 aa21.2■□□□□ 0.98
R3HDM1-213ENST00000463230 CFAP43Q8NDM7 1665 aa21.19■□□□□ 0.98
R3HDM1-213ENST00000463230 TSPOAP1O95153 1857 aa21.18■□□□□ 0.98
R3HDM1-213ENST00000463230 PPRC1Q5VV67 1664 aaKnown RBP21.18■□□□□ 0.98
R3HDM1-213ENST00000463230 CLIP1P30622 1438 aa21.18■□□□□ 0.98
R3HDM1-213ENST00000463230 TEX14Q8IWB6 1497 aa21.17■□□□□ 0.98
R3HDM1-213ENST00000463230 MAGI3Q5TCQ9 1506 aa21.13■□□□□ 0.97
R3HDM1-213ENST00000463230 ABCA9Q8IUA7 1624 aa21.12■□□□□ 0.97
R3HDM1-213ENST00000463230 CASKIN1Q8WXD9 1431 aa21.11■□□□□ 0.97
R3HDM1-213ENST00000463230 ARID3CA6NKF2 412 aa21.1■□□□□ 0.97
R3HDM1-213ENST00000463230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.1■□□□□ 0.97
R3HDM1-213ENST00000463230 HNRNPUL2Q1KMD3 747 aaKnown RBP21.1■□□□□ 0.97
R3HDM1-213ENST00000463230 CD109Q6YHK3 1445 aa21.1■□□□□ 0.97
R3HDM1-213ENST00000463230 KDM6BO15054 1643 aa21.1■□□□□ 0.97
R3HDM1-213ENST00000463230 PLEKHD1A6NEE1 506 aa21.09■□□□□ 0.97
R3HDM1-213ENST00000463230 KCNH8Q96L42 1107 aa21.09■□□□□ 0.97
R3HDM1-213ENST00000463230 FYCO1Q9BQS8 1478 aa21.07■□□□□ 0.96
R3HDM1-213ENST00000463230 CDK13Q14004 1512 aaKnown RBP21.07■□□□□ 0.96
R3HDM1-213ENST00000463230 CCDC18Q5T9S5 1454 aa21.07■□□□□ 0.96
R3HDM1-213ENST00000463230 PCF11O94913 1555 aaKnown RBP21.07■□□□□ 0.96
R3HDM1-213ENST00000463230 CEP162Q5TB80 1403 aa21.06■□□□□ 0.96
R3HDM1-213ENST00000463230 CDK11AQ9UQ88 783 aaPredicted RBP21.04■□□□□ 0.96
R3HDM1-213ENST00000463230 PHLDB1Q86UU1 1377 aa21.02■□□□□ 0.96
R3HDM1-213ENST00000463230 LRRIQ1Q96JM4 1722 aa21.01■□□□□ 0.95
R3HDM1-213ENST00000463230 ATP1B4Q9UN42 357 aaPredicted RBP20.99■□□□□ 0.95
R3HDM1-213ENST00000463230 TROQ12816 1431 aaPredicted RBP20.98■□□□□ 0.95
R3HDM1-213ENST00000463230 NEO1Q92859 1461 aa20.97■□□□□ 0.95
R3HDM1-213ENST00000463230 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.97■□□□□ 0.95
R3HDM1-213ENST00000463230 CFAP74Q9C0B2 1584 aa20.95■□□□□ 0.94
R3HDM1-213ENST00000463230 KIF14Q15058 1648 aa20.95■□□□□ 0.94
R3HDM1-213ENST00000463230 ARAP3Q8WWN8 1544 aa20.95■□□□□ 0.94
R3HDM1-213ENST00000463230 LOC105371045A0A1W2PR82 267 aa20.93■□□□□ 0.94
R3HDM1-213ENST00000463230 TTC37Q6PGP7 1564 aa20.93■□□□□ 0.94
R3HDM1-213ENST00000463230 COL17A1Q9UMD9 1497 aaPredicted RBP20.91■□□□□ 0.94
R3HDM1-213ENST00000463230 MYO5CQ9NQX4 1742 aa20.88■□□□□ 0.93
R3HDM1-213ENST00000463230 PLCH2O75038 1416 aa20.87■□□□□ 0.93
R3HDM1-213ENST00000463230 FANCAO15360 1455 aa20.85■□□□□ 0.93
R3HDM1-213ENST00000463230 VPS8Q8N3P4 1428 aa20.85■□□□□ 0.93
R3HDM1-213ENST00000463230 AKNAQ7Z591 1439 aa20.82■□□□□ 0.92
R3HDM1-213ENST00000463230 EHBP1L1Q8N3D4 1523 aa20.79■□□□□ 0.92
R3HDM1-213ENST00000463230 PREX2Q70Z35 1606 aa20.78■□□□□ 0.92
R3HDM1-213ENST00000463230 DENND4BO75064 1496 aaPredicted RBP20.78■□□□□ 0.92
R3HDM1-213ENST00000463230 EFCAB2Q5VUJ9 269 aa20.77■□□□□ 0.92
R3HDM1-213ENST00000463230 MTUS2Q5JR59 1369 aa20.76■□□□□ 0.91
R3HDM1-213ENST00000463230 MAP3K1Q13233 1512 aa20.76■□□□□ 0.91
R3HDM1-213ENST00000463230 FRMPD1Q5SYB0 1578 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 350.4 ms