RNA–Protein interactions for RNA: ENST00000462997.5

POLR3F-203, Transcript of RNA polymerase III subunit F, humanhuman

TSL 1 (best)

Gene POLR3F, Length 2,257 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3F-203ENST00000462997 ARHGAP35Q9NRY4 1499 aa16.03■□□□□ 0.16
POLR3F-203ENST00000462997 GRIN2BQ13224 1484 aa16.01■□□□□ 0.15
POLR3F-203ENST00000462997 CUL7Q14999 1698 aa16.01■□□□□ 0.15
POLR3F-203ENST00000462997 HNRNPUL2Q1KMD3 747 aaKnown RBP16■□□□□ 0.15
POLR3F-203ENST00000462997 PBRM1Q86U86 1689 aa15.99■□□□□ 0.15
POLR3F-203ENST00000462997 EIF4G3O43432 1585 aaKnown RBP15.99■□□□□ 0.15
POLR3F-203ENST00000462997 FHAD1B1AJZ9 1412 aa15.94■□□□□ 0.14
POLR3F-203ENST00000462997 KANK4Q5T7N3 995 aaPredicted RBP15.93■□□□□ 0.14
POLR3F-203ENST00000462997 ADAMTS12P58397 1594 aa15.92■□□□□ 0.14
POLR3F-203ENST00000462997 RRBP1Q9P2E9 1410 aaKnown RBP15.91■□□□□ 0.14
POLR3F-203ENST00000462997 MAGI1Q96QZ7 1491 aaPredicted RBP15.9■□□□□ 0.14
POLR3F-203ENST00000462997 SNAPC4Q5SXM2 1469 aa15.9■□□□□ 0.14
POLR3F-203ENST00000462997 MAP3K1Q13233 1512 aa15.88■□□□□ 0.13
POLR3F-203ENST00000462997 TIAM1Q13009 1591 aa15.84■□□□□ 0.13
POLR3F-203ENST00000462997 DIEXFQ68CQ4 756 aaKnown RBP15.84■□□□□ 0.13
POLR3F-203ENST00000462997 SYNJ2O15056 1496 aa15.83■□□□□ 0.12
POLR3F-203ENST00000462997 CCNB3Q8WWL7 1395 aa15.81■□□□□ 0.12
POLR3F-203ENST00000462997 CLSPNQ9HAW4 1339 aa15.81■□□□□ 0.12
POLR3F-203ENST00000462997 CTTNBP2Q8WZ74 1663 aa15.81■□□□□ 0.12
POLR3F-203ENST00000462997 ZNF316A6NFI3 1004 aaPredicted RBP15.8■□□□□ 0.12
POLR3F-203ENST00000462997 GRIN2AQ12879 1464 aa15.8■□□□□ 0.12
POLR3F-203ENST00000462997 EFCAB5A4FU69 1503 aa15.8■□□□□ 0.12
POLR3F-203ENST00000462997 CHMP7Q8WUX9 453 aaPredicted RBP15.78■□□□□ 0.12
POLR3F-203ENST00000462997 DHX57Q6P158 1386 aaKnown RBP15.78■□□□□ 0.12
POLR3F-203ENST00000462997 LRRC9Q6ZRR7 1453 aa15.76■□□□□ 0.11
POLR3F-203ENST00000462997 PCF11O94913 1555 aaKnown RBP15.76■□□□□ 0.11
POLR3F-203ENST00000462997 CFAP43Q8NDM7 1665 aa15.76■□□□□ 0.11
POLR3F-203ENST00000462997 FBLN2P98095 1184 aa15.72■□□□□ 0.11
POLR3F-203ENST00000462997 FHOD3Q2V2M9 1422 aa15.72■□□□□ 0.11
POLR3F-203ENST00000462997 FYCO1Q9BQS8 1478 aa15.72■□□□□ 0.11
POLR3F-203ENST00000462997 NUP160Q12769 1436 aa15.72■□□□□ 0.11
POLR3F-203ENST00000462997 KIAA0586Q9BVV6 1533 aa15.71■□□□□ 0.11
POLR3F-203ENST00000462997 CASKIN1Q8WXD9 1431 aa15.7■□□□□ 0.1
POLR3F-203ENST00000462997 IQGAP2Q13576 1575 aa15.69■□□□□ 0.1
POLR3F-203ENST00000462997 CEP170Q5SW79 1584 aa15.69■□□□□ 0.1
POLR3F-203ENST00000462997 PHLDB1Q86UU1 1377 aa15.68■□□□□ 0.1
POLR3F-203ENST00000462997 P3H3Q8IVL6 736 aa15.68■□□□□ 0.1
POLR3F-203ENST00000462997 CHD1O14646 1710 aa15.67■□□□□ 0.1
POLR3F-203ENST00000462997 FMN1Q68DA7 1419 aa15.66■□□□□ 0.1
POLR3F-203ENST00000462997 SCAF1Q9H7N4 1312 aaKnown RBP15.64■□□□□ 0.09
POLR3F-203ENST00000462997 SAMD9Q5K651 1589 aa15.64■□□□□ 0.09
POLR3F-203ENST00000462997 UGGT2Q9NYU1 1516 aa15.64■□□□□ 0.09
POLR3F-203ENST00000462997 RAB3GAP2Q9H2M9 1393 aa15.62■□□□□ 0.09
POLR3F-203ENST00000462997 ITGAEP38570 1179 aa15.61■□□□□ 0.09
POLR3F-203ENST00000462997 ACIN1Q9UKV3 1341 aaKnown RBP15.61■□□□□ 0.09
POLR3F-203ENST00000462997 SETD5Q9C0A6 1442 aa15.58■□□□□ 0.09
POLR3F-203ENST00000462997 ATP1B4Q9UN42 357 aaPredicted RBP15.58■□□□□ 0.08
POLR3F-203ENST00000462997 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.58■□□□□ 0.08
POLR3F-203ENST00000462997 CENPBP07199 599 aaPredicted RBP15.57■□□□□ 0.08
POLR3F-203ENST00000462997 JPH4Q96JJ6 628 aa15.57■□□□□ 0.08
POLR3F-203ENST00000462997 NEUROD1Q13562 356 aa15.56■□□□□ 0.08
POLR3F-203ENST00000462997 MAPKBP1O60336 1514 aa15.56■□□□□ 0.08
POLR3F-203ENST00000462997 DISP1Q96F81 1524 aa15.55■□□□□ 0.08
POLR3F-203ENST00000462997 FAM50AQ14320 339 aaKnown RBP15.55■□□□□ 0.08
POLR3F-203ENST00000462997 CLASP1Q7Z460 1538 aa15.54■□□□□ 0.08
POLR3F-203ENST00000462997 KIAA0556O60303 1618 aa15.53■□□□□ 0.08
POLR3F-203ENST00000462997 CARMIL2Q6F5E8 1435 aa15.52■□□□□ 0.08
POLR3F-203ENST00000462997 FGD6Q6ZV73 1430 aa15.51■□□□□ 0.07
POLR3F-203ENST00000462997 SHROOM2Q13796 1616 aa15.51■□□□□ 0.07
POLR3F-203ENST00000462997 MTUS2Q5JR59 1369 aa15.5■□□□□ 0.07
POLR3F-203ENST00000462997 MIER1Q8N108 512 aa15.5■□□□□ 0.07
POLR3F-203ENST00000462997 LRRIQ1Q96JM4 1722 aa15.49■□□□□ 0.07
POLR3F-203ENST00000462997 OSCARQ8IYS5 282 aa15.48■□□□□ 0.07
POLR3F-203ENST00000462997 EHBP1L1Q8N3D4 1523 aa15.48■□□□□ 0.07
POLR3F-203ENST00000462997 PRG4Q92954 1404 aaPredicted RBP15.47■□□□□ 0.07
POLR3F-203ENST00000462997 NCOA2Q15596 1464 aa15.45■□□□□ 0.06
POLR3F-203ENST00000462997 CCDC18Q5T9S5 1454 aa15.45■□□□□ 0.06
POLR3F-203ENST00000462997 MYOM3Q5VTT5 1437 aa15.44■□□□□ 0.06
POLR3F-203ENST00000462997 HECW1Q76N89 1606 aa15.43■□□□□ 0.06
POLR3F-203ENST00000462997 SUPT6HQ7KZ85 1726 aaKnown RBP15.43■□□□□ 0.06
POLR3F-203ENST00000462997 ARHGEF11O15085 1522 aa15.42■□□□□ 0.06
POLR3F-203ENST00000462997 HFM1A2PYH4 1435 aa15.39■□□□□ 0.05
POLR3F-203ENST00000462997 MAGI3Q5TCQ9 1506 aa15.39■□□□□ 0.05
POLR3F-203ENST00000462997 PTPRKQ15262 1439 aa15.38■□□□□ 0.05
POLR3F-203ENST00000462997 ERCC6L2Q5T890 1561 aa15.37■□□□□ 0.05
POLR3F-203ENST00000462997 PTPRGP23470 1445 aa15.37■□□□□ 0.05
POLR3F-203ENST00000462997 YTHDC1Q96MU7 727 aaKnown RBP15.37■□□□□ 0.05
POLR3F-203ENST00000462997 GTF3C3Q9Y5Q9 886 aa15.37■□□□□ 0.05
POLR3F-203ENST00000462997 EPRSP07814 1512 aaKnown RBP15.36■□□□□ 0.05
POLR3F-203ENST00000462997 TIMELESSQ9UNS1 1208 aa15.36■□□□□ 0.05
POLR3F-203ENST00000462997 PTPN23Q9H3S7 1636 aa15.36■□□□□ 0.05
POLR3F-203ENST00000462997 RAPGEF6Q8TEU7 1601 aa15.36■□□□□ 0.05
POLR3F-203ENST00000462997 TCOF1Q13428 1488 aaKnown RBP15.34■□□□□ 0.05
POLR3F-203ENST00000462997 ABCA8O94911 1581 aa15.34■□□□□ 0.05
POLR3F-203ENST00000462997 SIN3AQ96ST3 1273 aa15.34■□□□□ 0.05
POLR3F-203ENST00000462997 NAIPQ13075 1403 aa15.33■□□□□ 0.04
POLR3F-203ENST00000462997 UACAQ9BZF9 1416 aa15.33■□□□□ 0.04
POLR3F-203ENST00000462997 PLB1Q6P1J6 1458 aa15.33■□□□□ 0.04
POLR3F-203ENST00000462997 NUP153P49790 1475 aaKnown RBP15.31■□□□□ 0.04
POLR3F-203ENST00000462997 CDK13Q14004 1512 aaKnown RBP15.31■□□□□ 0.04
POLR3F-203ENST00000462997 MIA2Q96PC5 1412 aa15.29■□□□□ 0.04
POLR3F-203ENST00000462997 AKNAQ7Z591 1439 aa15.27■□□□□ 0.04
POLR3F-203ENST00000462997 GCC2Q8IWJ2 1684 aa15.25■□□□□ 0.03
POLR3F-203ENST00000462997 UHRF1BP1LA0JNW5 1464 aa15.25■□□□□ 0.03
POLR3F-203ENST00000462997 ABCC2Q92887 1545 aa15.24■□□□□ 0.03
POLR3F-203ENST00000462997 PPP1R15AO75807 674 aaPredicted RBP15.24■□□□□ 0.03
POLR3F-203ENST00000462997 CDK11AQ9UQ88 783 aaPredicted RBP15.22■□□□□ 0.03
POLR3F-203ENST00000462997 ATP10BO94823 1461 aa15.22■□□□□ 0.03
POLR3F-203ENST00000462997 TONSLQ96HA7 1378 aa15.22■□□□□ 0.03
POLR3F-203ENST00000462997 ARID3CA6NKF2 412 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms