RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-208ENST00000462970 FAM9AQ8IZU1 332 aaPredicted RBP16.09■□□□□ 0.17
PSMD4-208ENST00000462970 TRHP20396 242 aaPredicted RBP16.08■□□□□ 0.16
PSMD4-208ENST00000462970 RAPGEF2Q9Y4G8 1499 aa16.07■□□□□ 0.16
PSMD4-208ENST00000462970 ERCC6L2Q5T890 1561 aa16.07■□□□□ 0.16
PSMD4-208ENST00000462970 SHROOM2Q13796 1616 aa16.06■□□□□ 0.16
PSMD4-208ENST00000462970 JPH4Q96JJ6 628 aa16.04■□□□□ 0.16
PSMD4-208ENST00000462970 KIAA0586Q9BVV6 1533 aa16.04■□□□□ 0.16
PSMD4-208ENST00000462970 PRG4Q92954 1404 aaPredicted RBP16.03■□□□□ 0.16
PSMD4-208ENST00000462970 CSRNP3Q8WYN3 585 aa16.01■□□□□ 0.15
PSMD4-208ENST00000462970 EEA1Q15075 1411 aa15.99■□□□□ 0.15
PSMD4-208ENST00000462970 IQGAP2Q13576 1575 aa15.99■□□□□ 0.15
PSMD4-208ENST00000462970 CTTNBP2Q8WZ74 1663 aa15.99■□□□□ 0.15
PSMD4-208ENST00000462970 PRXQ9BXM0 1461 aa15.97■□□□□ 0.15
PSMD4-208ENST00000462970 TTBK1Q5TCY1 1321 aaPredicted RBP15.96■□□□□ 0.15
PSMD4-208ENST00000462970 EHMT2Q96KQ7 1210 aa15.95■□□□□ 0.14
PSMD4-208ENST00000462970 PHF23Q9BUL5 403 aaPredicted RBP15.92■□□□□ 0.14
PSMD4-208ENST00000462970 CARMIL2Q6F5E8 1435 aa15.9■□□□□ 0.14
PSMD4-208ENST00000462970 RANGAP1P46060 587 aaPredicted RBP15.86■□□□□ 0.13
PSMD4-208ENST00000462970 KIF21BO75037 1637 aa15.86■□□□□ 0.13
PSMD4-208ENST00000462970 UGGT2Q9NYU1 1516 aa15.85■□□□□ 0.13
PSMD4-208ENST00000462970 PTPRGP23470 1445 aa15.84■□□□□ 0.13
PSMD4-208ENST00000462970 DISP1Q96F81 1524 aa15.84■□□□□ 0.13
PSMD4-208ENST00000462970 KIAA0556O60303 1618 aa15.83■□□□□ 0.13
PSMD4-208ENST00000462970 TNIKQ9UKE5 1360 aa15.83■□□□□ 0.12
PSMD4-208ENST00000462970 UBTFP17480 764 aaKnown RBP15.81■□□□□ 0.12
PSMD4-208ENST00000462970 GOLGA3Q08378 1498 aa15.8■□□□□ 0.12
PSMD4-208ENST00000462970 P3H3Q8IVL6 736 aa15.8■□□□□ 0.12
PSMD4-208ENST00000462970 NPM1P06748 294 aaKnown RBP eCLIP15.79■□□□□ 0.12
PSMD4-208ENST00000462970 ADCY10Q96PN6 1610 aa15.79■□□□□ 0.12
PSMD4-208ENST00000462970 UACAQ9BZF9 1416 aa15.71■□□□□ 0.11
PSMD4-208ENST00000462970 SAMD9Q5K651 1589 aa15.7■□□□□ 0.1
PSMD4-208ENST00000462970 ABCC2Q92887 1545 aa15.68■□□□□ 0.1
PSMD4-208ENST00000462970 PLB1Q6P1J6 1458 aa15.68■□□□□ 0.1
PSMD4-208ENST00000462970 FHOD3Q2V2M9 1422 aa15.66■□□□□ 0.1
PSMD4-208ENST00000462970 UHRF1BP1LA0JNW5 1464 aa15.65■□□□□ 0.1
PSMD4-208ENST00000462970 ARID3CA6NKF2 412 aa15.65■□□□□ 0.1
PSMD4-208ENST00000462970 EFCAB5A4FU69 1503 aa15.64■□□□□ 0.09
PSMD4-208ENST00000462970 KIF13AQ9H1H9 1805 aa15.64■□□□□ 0.09
PSMD4-208ENST00000462970 ZCCHC11Q5TAX3 1644 aaKnown RBP15.64■□□□□ 0.09
PSMD4-208ENST00000462970 MAPKBP1O60336 1514 aa15.63■□□□□ 0.09
PSMD4-208ENST00000462970 ABCA8O94911 1581 aa15.63■□□□□ 0.09
PSMD4-208ENST00000462970 FAM69CQ0P6D2 419 aa15.61■□□□□ 0.09
PSMD4-208ENST00000462970 RAPGEF6Q8TEU7 1601 aa15.6■□□□□ 0.09
PSMD4-208ENST00000462970 ASXL2Q76L83 1435 aa15.6■□□□□ 0.09
PSMD4-208ENST00000462970 KDM5BQ9UGL1 1544 aa15.59■□□□□ 0.09
PSMD4-208ENST00000462970 TSPOAP1O95153 1857 aa15.59■□□□□ 0.09
PSMD4-208ENST00000462970 ABCC10Q5T3U5 1492 aa15.58■□□□□ 0.08
PSMD4-208ENST00000462970 DIP2BQ9P265 1576 aa15.58■□□□□ 0.08
PSMD4-208ENST00000462970 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.57■□□□□ 0.08
PSMD4-208ENST00000462970 HNRNPUL2Q1KMD3 747 aaKnown RBP15.57■□□□□ 0.08
PSMD4-208ENST00000462970 ATP1B4Q9UN42 357 aaPredicted RBP15.57■□□□□ 0.08
PSMD4-208ENST00000462970 ARHGAP35Q9NRY4 1499 aa15.56■□□□□ 0.08
PSMD4-208ENST00000462970 LOC105371045A0A1W2PR82 267 aa15.52■□□□□ 0.08
PSMD4-208ENST00000462970 KCNH8Q96L42 1107 aa15.52■□□□□ 0.08
PSMD4-208ENST00000462970 CLIP1P30622 1438 aa15.51■□□□□ 0.07
PSMD4-208ENST00000462970 ATP10BO94823 1461 aa15.51■□□□□ 0.07
PSMD4-208ENST00000462970 WDR7Q9Y4E6 1490 aa15.51■□□□□ 0.07
PSMD4-208ENST00000462970 NUP153P49790 1475 aaKnown RBP15.5■□□□□ 0.07
PSMD4-208ENST00000462970 FMN1Q68DA7 1419 aa15.5■□□□□ 0.07
PSMD4-208ENST00000462970 EPRSP07814 1512 aaKnown RBP15.48■□□□□ 0.07
PSMD4-208ENST00000462970 SENP3Q9H4L4 574 aaPredicted RBP15.48■□□□□ 0.07
PSMD4-208ENST00000462970 HECW1Q76N89 1606 aa15.46■□□□□ 0.07
PSMD4-208ENST00000462970 GLI2P10070 1586 aa15.45■□□□□ 0.06
PSMD4-208ENST00000462970 CDK13Q14004 1512 aaKnown RBP15.45■□□□□ 0.06
PSMD4-208ENST00000462970 CEP162Q5TB80 1403 aa15.44■□□□□ 0.06
PSMD4-208ENST00000462970 PCF11O94913 1555 aaKnown RBP15.43■□□□□ 0.06
PSMD4-208ENST00000462970 MAP3K4Q9Y6R4 1608 aa15.42■□□□□ 0.06
PSMD4-208ENST00000462970 PLEKHD1A6NEE1 506 aa15.41■□□□□ 0.06
PSMD4-208ENST00000462970 PPRC1Q5VV67 1664 aaKnown RBP15.4■□□□□ 0.06
PSMD4-208ENST00000462970 CFAP43Q8NDM7 1665 aa15.4■□□□□ 0.06
PSMD4-208ENST00000462970 LRRIQ1Q96JM4 1722 aa15.4■□□□□ 0.06
PSMD4-208ENST00000462970 CD109Q6YHK3 1445 aa15.38■□□□□ 0.05
PSMD4-208ENST00000462970 CASKIN1Q8WXD9 1431 aa15.37■□□□□ 0.05
PSMD4-208ENST00000462970 KDM6BO15054 1643 aa15.37■□□□□ 0.05
PSMD4-208ENST00000462970 TEX14Q8IWB6 1497 aa15.35■□□□□ 0.05
PSMD4-208ENST00000462970 FYCO1Q9BQS8 1478 aa15.35■□□□□ 0.05
PSMD4-208ENST00000462970 CDK11AQ9UQ88 783 aaPredicted RBP15.35■□□□□ 0.05
PSMD4-208ENST00000462970 ABCA9Q8IUA7 1624 aa15.34■□□□□ 0.05
PSMD4-208ENST00000462970 CCDC18Q5T9S5 1454 aa15.33■□□□□ 0.04
PSMD4-208ENST00000462970 TTC37Q6PGP7 1564 aa15.3■□□□□ 0.04
PSMD4-208ENST00000462970 MAGI3Q5TCQ9 1506 aa15.29■□□□□ 0.04
PSMD4-208ENST00000462970 KIF14Q15058 1648 aa15.28■□□□□ 0.04
PSMD4-208ENST00000462970 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.28■□□□□ 0.04
PSMD4-208ENST00000462970 KDM4FA0A1W2PPD8 638 aa15.28■□□□□ 0.04
PSMD4-208ENST00000462970 TROQ12816 1431 aaPredicted RBP15.27■□□□□ 0.04
PSMD4-208ENST00000462970 MYO5CQ9NQX4 1742 aa15.26■□□□□ 0.03
PSMD4-208ENST00000462970 COL17A1Q9UMD9 1497 aaPredicted RBP15.24■□□□□ 0.03
PSMD4-208ENST00000462970 VPS8Q8N3P4 1428 aa15.23■□□□□ 0.03
PSMD4-208ENST00000462970 MTUS2Q5JR59 1369 aa15.22■□□□□ 0.03
PSMD4-208ENST00000462970 CFAP74Q9C0B2 1584 aa15.21■□□□□ 0.03
PSMD4-208ENST00000462970 FANCAO15360 1455 aa15.2■□□□□ 0.02
PSMD4-208ENST00000462970 NEO1Q92859 1461 aa15.2■□□□□ 0.02
PSMD4-208ENST00000462970 ARHGAP5Q13017 1502 aa15.18■□□□□ 0.02
PSMD4-208ENST00000462970 PHLDB1Q86UU1 1377 aa15.17■□□□□ 0.02
PSMD4-208ENST00000462970 ARAP3Q8WWN8 1544 aa15.17■□□□□ 0.02
PSMD4-208ENST00000462970 PLCH2O75038 1416 aa15.17■□□□□ 0.02
PSMD4-208ENST00000462970 AKNAQ7Z591 1439 aa15.17■□□□□ 0.02
PSMD4-208ENST00000462970 RAPGEF3O95398 923 aa15.16■□□□□ 0.02
PSMD4-208ENST00000462970 EFCAB2Q5VUJ9 269 aa15.16■□□□□ 0.02
PSMD4-208ENST00000462970 TIAM1Q13009 1591 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms