RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 CTTNBP2Q8WZ74 1663 aa28.95■■■□□ 2.23
ATPAF2-202ENST00000462733 OSCARQ8IYS5 282 aa28.94■■■□□ 2.22
ATPAF2-202ENST00000462733 KIAA0586Q9BVV6 1533 aa28.89■■■□□ 2.22
ATPAF2-202ENST00000462733 TNIKQ9UKE5 1360 aa28.89■■■□□ 2.22
ATPAF2-202ENST00000462733 RANGAP1P46060 587 aaPredicted RBP28.87■■■□□ 2.21
ATPAF2-202ENST00000462733 IQGAP2Q13576 1575 aa28.85■■■□□ 2.21
ATPAF2-202ENST00000462733 CLASP1Q7Z460 1538 aa28.83■■■□□ 2.21
ATPAF2-202ENST00000462733 JPH4Q96JJ6 628 aa28.76■■■□□ 2.19
ATPAF2-202ENST00000462733 CEP162Q5TB80 1403 aa28.7■■■□□ 2.18
ATPAF2-202ENST00000462733 UGGT2Q9NYU1 1516 aa28.69■■■□□ 2.18
ATPAF2-202ENST00000462733 SHROOM2Q13796 1616 aa28.68■■■□□ 2.18
ATPAF2-202ENST00000462733 CLIP1P30622 1438 aa28.66■■■□□ 2.18
ATPAF2-202ENST00000462733 PRG4Q92954 1404 aaPredicted RBP28.64■■■□□ 2.18
ATPAF2-202ENST00000462733 P3H3Q8IVL6 736 aa28.63■■■□□ 2.17
ATPAF2-202ENST00000462733 DISP1Q96F81 1524 aa28.6■■■□□ 2.17
ATPAF2-202ENST00000462733 ARHGAP35Q9NRY4 1499 aa28.59■■■□□ 2.17
ATPAF2-202ENST00000462733 SAMD9Q5K651 1589 aa28.59■■■□□ 2.17
ATPAF2-202ENST00000462733 ERCC6L2Q5T890 1561 aa28.58■■■□□ 2.17
ATPAF2-202ENST00000462733 EFCAB5A4FU69 1503 aa28.57■■■□□ 2.16
ATPAF2-202ENST00000462733 KIAA0556O60303 1618 aa28.57■■■□□ 2.16
ATPAF2-202ENST00000462733 CARMIL2Q6F5E8 1435 aa28.57■■■□□ 2.16
ATPAF2-202ENST00000462733 FHOD3Q2V2M9 1422 aa28.52■■■□□ 2.16
ATPAF2-202ENST00000462733 TTBK1Q5TCY1 1321 aaPredicted RBP28.51■■■□□ 2.16
ATPAF2-202ENST00000462733 ARAP1Q96P48 1450 aa28.48■■■□□ 2.15
ATPAF2-202ENST00000462733 ARHGEF11O15085 1522 aa28.46■■■□□ 2.15
ATPAF2-202ENST00000462733 HRCP23327 699 aa28.4■■■□□ 2.14
ATPAF2-202ENST00000462733 RIMBP3CA6NJZ7 1639 aa28.4■■■□□ 2.14
ATPAF2-202ENST00000462733 RIMBP3BA6NNM3 1639 aa28.4■■■□□ 2.14
ATPAF2-202ENST00000462733 RIMBP3Q9UFD9 1639 aa28.4■■■□□ 2.14
ATPAF2-202ENST00000462733 PTPRGP23470 1445 aa28.38■■■□□ 2.13
ATPAF2-202ENST00000462733 FMN1Q68DA7 1419 aa28.32■■■□□ 2.12
ATPAF2-202ENST00000462733 DNAJC5Q9H3Z4 198 aa28.3■■■□□ 2.12
ATPAF2-202ENST00000462733 PCGF6Q9BYE7 350 aa28.28■■■□□ 2.12
ATPAF2-202ENST00000462733 VPS8Q8N3P4 1428 aa28.28■■■□□ 2.12
ATPAF2-202ENST00000462733 PLB1Q6P1J6 1458 aa28.26■■■□□ 2.11
ATPAF2-202ENST00000462733 ATP1B4Q9UN42 357 aaPredicted RBP28.24■■■□□ 2.11
ATPAF2-202ENST00000462733 CYB5RLQ6IPT4 315 aa28.23■■■□□ 2.11
ATPAF2-202ENST00000462733 PCF11O94913 1555 aaKnown RBP28.22■■■□□ 2.11
ATPAF2-202ENST00000462733 RAPGEF6Q8TEU7 1601 aa28.21■■■□□ 2.11
ATPAF2-202ENST00000462733 UACAQ9BZF9 1416 aa28.2■■■□□ 2.1
ATPAF2-202ENST00000462733 ABCA8O94911 1581 aa28.19■■■□□ 2.1
ATPAF2-202ENST00000462733 CASKIN1Q8WXD9 1431 aa28.18■■■□□ 2.1
ATPAF2-202ENST00000462733 ARID3CA6NKF2 412 aa28.15■■■□□ 2.1
ATPAF2-202ENST00000462733 FYCO1Q9BQS8 1478 aa28.14■■■□□ 2.1
ATPAF2-202ENST00000462733 ABCC2Q92887 1545 aa28.12■■■□□ 2.09
ATPAF2-202ENST00000462733 HECW1Q76N89 1606 aa28.12■■■□□ 2.09
ATPAF2-202ENST00000462733 ADCY10Q96PN6 1610 aa28.11■■■□□ 2.09
ATPAF2-202ENST00000462733 NUP153P49790 1475 aaKnown RBP28.11■■■□□ 2.09
ATPAF2-202ENST00000462733 TRIM26Q12899 539 aaPredicted RBP28.1■■■□□ 2.09
ATPAF2-202ENST00000462733 UHRF1BP1LA0JNW5 1464 aa28.09■■■□□ 2.09
ATPAF2-202ENST00000462733 LRRIQ1Q96JM4 1722 aa28.06■■■□□ 2.08
ATPAF2-202ENST00000462733 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.04■■■□□ 2.08
ATPAF2-202ENST00000462733 HNRNPUL2Q1KMD3 747 aaKnown RBP28.04■■■□□ 2.08
ATPAF2-202ENST00000462733 EPRSP07814 1512 aaKnown RBP28.03■■■□□ 2.08
ATPAF2-202ENST00000462733 APLP2Q06481 763 aa28.02■■■□□ 2.08
ATPAF2-202ENST00000462733 CDK13Q14004 1512 aaKnown RBP28.02■■■□□ 2.08
ATPAF2-202ENST00000462733 ATP10BO94823 1461 aa28■■■□□ 2.07
ATPAF2-202ENST00000462733 CCDC18Q5T9S5 1454 aa27.98■■■□□ 2.07
ATPAF2-202ENST00000462733 ZCCHC11Q5TAX3 1644 aaKnown RBP27.97■■■□□ 2.07
ATPAF2-202ENST00000462733 KDM5BQ9UGL1 1544 aa27.97■■■□□ 2.07
ATPAF2-202ENST00000462733 NPM1P06748 294 aaKnown RBP eCLIP27.95■■■□□ 2.07
ATPAF2-202ENST00000462733 TIAM1Q13009 1591 aa27.94■■■□□ 2.06
ATPAF2-202ENST00000462733 CFAP43Q8NDM7 1665 aa27.93■■■□□ 2.06
ATPAF2-202ENST00000462733 MAP3K1Q13233 1512 aa27.88■■■□□ 2.05
ATPAF2-202ENST00000462733 PPARGC1BQ86YN6 1023 aaKnown RBP27.87■■■□□ 2.05
ATPAF2-202ENST00000462733 KANK4Q5T7N3 995 aaPredicted RBP27.86■■■□□ 2.05
ATPAF2-202ENST00000462733 CDK11AQ9UQ88 783 aaPredicted RBP27.86■■■□□ 2.05
ATPAF2-202ENST00000462733 PLEKHD1A6NEE1 506 aa27.84■■■□□ 2.05
ATPAF2-202ENST00000462733 MAGI3Q5TCQ9 1506 aa27.83■■■□□ 2.05
ATPAF2-202ENST00000462733 MTUS2Q5JR59 1369 aa27.82■■■□□ 2.04
ATPAF2-202ENST00000462733 LRRC9Q6ZRR7 1453 aa27.81■■■□□ 2.04
ATPAF2-202ENST00000462733 ASXL2Q76L83 1435 aa27.8■■■□□ 2.04
ATPAF2-202ENST00000462733 TROQ12816 1431 aaPredicted RBP27.76■■■□□ 2.03
ATPAF2-202ENST00000462733 EHBP1L1Q8N3D4 1523 aa27.75■■■□□ 2.03
ATPAF2-202ENST00000462733 WDR7Q9Y4E6 1490 aa27.75■■■□□ 2.03
ATPAF2-202ENST00000462733 KCNH8Q96L42 1107 aa27.75■■■□□ 2.03
ATPAF2-202ENST00000462733 MAPKBP1O60336 1514 aa27.74■■■□□ 2.03
ATPAF2-202ENST00000462733 KIF14Q15058 1648 aa27.67■■■□□ 2.02
ATPAF2-202ENST00000462733 SUPT6HQ7KZ85 1726 aaKnown RBP27.66■■■□□ 2.02
ATPAF2-202ENST00000462733 NCOA2Q15596 1464 aa27.62■■■□□ 2.01
ATPAF2-202ENST00000462733 ZEB1P37275 1124 aaPredicted RBP27.58■■■□□ 2.01
ATPAF2-202ENST00000462733 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.57■■■□□ 2
ATPAF2-202ENST00000462733 TTC37Q6PGP7 1564 aa27.56■■■□□ 2
ATPAF2-202ENST00000462733 ABCC10Q5T3U5 1492 aa27.55■■■□□ 2
ATPAF2-202ENST00000462733 DIP2BQ9P265 1576 aa27.54■■■□□ 2
ATPAF2-202ENST00000462733 FAM69CQ0P6D2 419 aa27.54■■■□□ 2
ATPAF2-202ENST00000462733 PHLDB1Q86UU1 1377 aa27.52■■■□□ 2
ATPAF2-202ENST00000462733 CCNB3Q8WWL7 1395 aa27.52■■■□□ 2
ATPAF2-202ENST00000462733 ABCA9Q8IUA7 1624 aa27.51■■□□□ 1.99
ATPAF2-202ENST00000462733 KIF13AQ9H1H9 1805 aa27.48■■□□□ 1.99
ATPAF2-202ENST00000462733 GLI2P10070 1586 aa27.48■■□□□ 1.99
ATPAF2-202ENST00000462733 CDC42BPAQ5VT25 1732 aa27.47■■□□□ 1.99
ATPAF2-202ENST00000462733 GPATCH8Q9UKJ3 1502 aaKnown RBP27.47■■□□□ 1.99
ATPAF2-202ENST00000462733 MYO5CQ9NQX4 1742 aa27.46■■□□□ 1.99
ATPAF2-202ENST00000462733 MYOM3Q5VTT5 1437 aa27.45■■□□□ 1.98
ATPAF2-202ENST00000462733 TRHP20396 242 aaPredicted RBP27.44■■□□□ 1.98
ATPAF2-202ENST00000462733 CD109Q6YHK3 1445 aa27.44■■□□□ 1.98
ATPAF2-202ENST00000462733 ITSN2Q9NZM3 1697 aa27.43■■□□□ 1.98
ATPAF2-202ENST00000462733 MAP3K4Q9Y6R4 1608 aa27.42■■□□□ 1.98
ATPAF2-202ENST00000462733 PREX2Q70Z35 1606 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms