RNA–Protein interactions for RNA: ENST00000462637.5

PCCB-204, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-204ENST00000462637 ARHGAP35Q9NRY4 1499 aa24.23■■□□□ 1.47
PCCB-204ENST00000462637 APLP2Q06481 763 aa24.21■■□□□ 1.47
PCCB-204ENST00000462637 MAGI1Q96QZ7 1491 aaPredicted RBP24.2■■□□□ 1.46
PCCB-204ENST00000462637 CHMP7Q8WUX9 453 aaPredicted RBP24.18■■□□□ 1.46
PCCB-204ENST00000462637 FBLN2P98095 1184 aa24.17■■□□□ 1.46
PCCB-204ENST00000462637 ADAMTS12P58397 1594 aa24.17■■□□□ 1.46
PCCB-204ENST00000462637 HRCP23327 699 aa24.13■■□□□ 1.45
PCCB-204ENST00000462637 SYNJ2O15056 1496 aa24.12■■□□□ 1.45
PCCB-204ENST00000462637 CTTNBP2Q8WZ74 1663 aa24.11■■□□□ 1.45
PCCB-204ENST00000462637 EFCAB5A4FU69 1503 aa24.11■■□□□ 1.45
PCCB-204ENST00000462637 GRIN2AQ12879 1464 aa24.06■■□□□ 1.44
PCCB-204ENST00000462637 TTBK1Q5TCY1 1321 aaPredicted RBP24.05■■□□□ 1.44
PCCB-204ENST00000462637 MAP3K1Q13233 1512 aa23.95■■□□□ 1.42
PCCB-204ENST00000462637 NUP160Q12769 1436 aa23.93■■□□□ 1.42
PCCB-204ENST00000462637 SAMD9Q5K651 1589 aa23.92■■□□□ 1.42
PCCB-204ENST00000462637 FHOD3Q2V2M9 1422 aa23.92■■□□□ 1.42
PCCB-204ENST00000462637 DNAJC5Q9H3Z4 198 aa23.91■■□□□ 1.42
PCCB-204ENST00000462637 KIAA0586Q9BVV6 1533 aa23.9■■□□□ 1.42
PCCB-204ENST00000462637 FMN1Q68DA7 1419 aa23.9■■□□□ 1.42
PCCB-204ENST00000462637 CEP170Q5SW79 1584 aa23.9■■□□□ 1.42
PCCB-204ENST00000462637 P3H3Q8IVL6 736 aa23.89■■□□□ 1.41
PCCB-204ENST00000462637 IQGAP2Q13576 1575 aa23.88■■□□□ 1.41
PCCB-204ENST00000462637 FYCO1Q9BQS8 1478 aa23.87■■□□□ 1.41
PCCB-204ENST00000462637 CHD1O14646 1710 aa23.87■■□□□ 1.41
PCCB-204ENST00000462637 CASKIN1Q8WXD9 1431 aa23.86■■□□□ 1.41
PCCB-204ENST00000462637 PCF11O94913 1555 aaKnown RBP23.85■■□□□ 1.41
PCCB-204ENST00000462637 TIAM1Q13009 1591 aa23.85■■□□□ 1.41
PCCB-204ENST00000462637 KANK4Q5T7N3 995 aaPredicted RBP23.84■■□□□ 1.41
PCCB-204ENST00000462637 JPH4Q96JJ6 628 aa23.82■■□□□ 1.4
PCCB-204ENST00000462637 ZEB1P37275 1124 aaPredicted RBP23.81■■□□□ 1.4
PCCB-204ENST00000462637 OSCARQ8IYS5 282 aa23.79■■□□□ 1.4
PCCB-204ENST00000462637 UGGT2Q9NYU1 1516 aa23.78■■□□□ 1.4
PCCB-204ENST00000462637 CFAP43Q8NDM7 1665 aa23.77■■□□□ 1.39
PCCB-204ENST00000462637 LRRC9Q6ZRR7 1453 aa23.75■■□□□ 1.39
PCCB-204ENST00000462637 ATP1B4Q9UN42 357 aaPredicted RBP23.71■■□□□ 1.39
PCCB-204ENST00000462637 RRBP1Q9P2E9 1410 aaKnown RBP23.7■■□□□ 1.38
PCCB-204ENST00000462637 CLASP1Q7Z460 1538 aa23.67■■□□□ 1.38
PCCB-204ENST00000462637 DISP1Q96F81 1524 aa23.67■■□□□ 1.38
PCCB-204ENST00000462637 PRG4Q92954 1404 aaPredicted RBP23.64■■□□□ 1.38
PCCB-204ENST00000462637 CARMIL2Q6F5E8 1435 aa23.63■■□□□ 1.37
PCCB-204ENST00000462637 KIAA0556O60303 1618 aa23.62■■□□□ 1.37
PCCB-204ENST00000462637 HNRNPUL2Q1KMD3 747 aaKnown RBP23.62■■□□□ 1.37
PCCB-204ENST00000462637 CCNB3Q8WWL7 1395 aa23.61■■□□□ 1.37
PCCB-204ENST00000462637 CCDC18Q5T9S5 1454 aa23.6■■□□□ 1.37
PCCB-204ENST00000462637 CCER1Q8TC90 406 aaPredicted RBP23.59■■□□□ 1.37
PCCB-204ENST00000462637 HECW1Q76N89 1606 aa23.59■■□□□ 1.37
PCCB-204ENST00000462637 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.59■■□□□ 1.37
PCCB-204ENST00000462637 SHROOM2Q13796 1616 aa23.57■■□□□ 1.36
PCCB-204ENST00000462637 MTUS2Q5JR59 1369 aa23.54■■□□□ 1.36
PCCB-204ENST00000462637 PHLDB1Q86UU1 1377 aa23.53■■□□□ 1.36
PCCB-204ENST00000462637 EHBP1L1Q8N3D4 1523 aa23.5■■□□□ 1.35
PCCB-204ENST00000462637 ERCC6L2Q5T890 1561 aa23.5■■□□□ 1.35
PCCB-204ENST00000462637 LRRIQ1Q96JM4 1722 aa23.49■■□□□ 1.35
PCCB-204ENST00000462637 EPRSP07814 1512 aaKnown RBP23.48■■□□□ 1.35
PCCB-204ENST00000462637 PTPRGP23470 1445 aa23.48■■□□□ 1.35
PCCB-204ENST00000462637 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.44■■□□□ 1.34
PCCB-204ENST00000462637 RAPGEF6Q8TEU7 1601 aa23.42■■□□□ 1.34
PCCB-204ENST00000462637 SUPT6HQ7KZ85 1726 aaKnown RBP23.41■■□□□ 1.34
PCCB-204ENST00000462637 NCOA2Q15596 1464 aa23.4■■□□□ 1.34
PCCB-204ENST00000462637 PLB1Q6P1J6 1458 aa23.38■■□□□ 1.33
PCCB-204ENST00000462637 FGD6Q6ZV73 1430 aa23.38■■□□□ 1.33
PCCB-204ENST00000462637 NUP153P49790 1475 aaKnown RBP23.38■■□□□ 1.33
PCCB-204ENST00000462637 CDK13Q14004 1512 aaKnown RBP23.37■■□□□ 1.33
PCCB-204ENST00000462637 ARHGEF11O15085 1522 aa23.36■■□□□ 1.33
PCCB-204ENST00000462637 MAGI3Q5TCQ9 1506 aa23.36■■□□□ 1.33
PCCB-204ENST00000462637 FAM50AQ14320 339 aaKnown RBP23.36■■□□□ 1.33
PCCB-204ENST00000462637 MYOM3Q5VTT5 1437 aa23.35■■□□□ 1.33
PCCB-204ENST00000462637 ARID3CA6NKF2 412 aa23.35■■□□□ 1.33
PCCB-204ENST00000462637 CDK11AQ9UQ88 783 aaPredicted RBP23.33■■□□□ 1.32
PCCB-204ENST00000462637 ITGAEP38570 1179 aa23.31■■□□□ 1.32
PCCB-204ENST00000462637 UACAQ9BZF9 1416 aa23.31■■□□□ 1.32
PCCB-204ENST00000462637 ABCA8O94911 1581 aa23.29■■□□□ 1.32
PCCB-204ENST00000462637 CLSPNQ9HAW4 1339 aa23.25■■□□□ 1.31
PCCB-204ENST00000462637 MIA2Q96PC5 1412 aa23.23■■□□□ 1.31
PCCB-204ENST00000462637 SETD5Q9C0A6 1442 aa23.22■■□□□ 1.31
PCCB-204ENST00000462637 TROQ12816 1431 aaPredicted RBP23.21■■□□□ 1.31
PCCB-204ENST00000462637 TCOF1Q13428 1488 aaKnown RBP23.21■■□□□ 1.31
PCCB-204ENST00000462637 ATP10BO94823 1461 aa23.2■■□□□ 1.3
PCCB-204ENST00000462637 PTPN23Q9H3S7 1636 aa23.2■■□□□ 1.3
PCCB-204ENST00000462637 DHX57Q6P158 1386 aaKnown RBP23.19■■□□□ 1.3
PCCB-204ENST00000462637 CYB5RLQ6IPT4 315 aa23.19■■□□□ 1.3
PCCB-204ENST00000462637 UHRF1BP1LA0JNW5 1464 aa23.19■■□□□ 1.3
PCCB-204ENST00000462637 ABCC2Q92887 1545 aa23.19■■□□□ 1.3
PCCB-204ENST00000462637 RAB3GAP2Q9H2M9 1393 aa23.18■■□□□ 1.3
PCCB-204ENST00000462637 RIMBP3CA6NJZ7 1639 aa23.16■■□□□ 1.3
PCCB-204ENST00000462637 RIMBP3BA6NNM3 1639 aa23.16■■□□□ 1.3
PCCB-204ENST00000462637 RIMBP3Q9UFD9 1639 aa23.16■■□□□ 1.3
PCCB-204ENST00000462637 PLEKHD1A6NEE1 506 aa23.13■■□□□ 1.29
PCCB-204ENST00000462637 ADCY10Q96PN6 1610 aa23.11■■□□□ 1.29
PCCB-204ENST00000462637 KDM5BQ9UGL1 1544 aa23.09■■□□□ 1.29
PCCB-204ENST00000462637 HFM1A2PYH4 1435 aa23.07■■□□□ 1.28
PCCB-204ENST00000462637 NPM1P06748 294 aaKnown RBP eCLIP23.07■■□□□ 1.28
PCCB-204ENST00000462637 PTPRKQ15262 1439 aa23.07■■□□□ 1.28
PCCB-204ENST00000462637 KIF14Q15058 1648 aa23.03■■□□□ 1.28
PCCB-204ENST00000462637 ITSN2Q9NZM3 1697 aa23.03■■□□□ 1.28
PCCB-204ENST00000462637 AKNAQ7Z591 1439 aa23.02■■□□□ 1.28
PCCB-204ENST00000462637 GPATCH8Q9UKJ3 1502 aaKnown RBP23■■□□□ 1.27
PCCB-204ENST00000462637 ZCCHC11Q5TAX3 1644 aaKnown RBP22.99■■□□□ 1.27
PCCB-204ENST00000462637 NAIPQ13075 1403 aa22.98■■□□□ 1.27
PCCB-204ENST00000462637 CFDP1Q9UEE9 299 aaPredicted RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms