RNA–Protein interactions for RNA: ENST00000462394.1

LDLRAP1-202, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 369 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-202ENST00000462394 MAPKBP1O60336 1514 aa8□□□□□ -1.13
LDLRAP1-202ENST00000462394 KDM6BO15054 1643 aa8□□□□□ -1.13
LDLRAP1-202ENST00000462394 SHROOM2Q13796 1616 aa7.99□□□□□ -1.13
LDLRAP1-202ENST00000462394 GRIN2AQ12879 1464 aa7.99□□□□□ -1.13
LDLRAP1-202ENST00000462394 HECW2Q9P2P5 1572 aa7.98□□□□□ -1.13
LDLRAP1-202ENST00000462394 DIP2BQ9P265 1576 aa7.97□□□□□ -1.13
LDLRAP1-202ENST00000462394 ADGRL1O94910 1474 aa7.96□□□□□ -1.13
LDLRAP1-202ENST00000462394 NPM1P06748 294 aaKnown RBP eCLIP7.96□□□□□ -1.14
LDLRAP1-202ENST00000462394 CUX1P39880 1505 aa7.95□□□□□ -1.14
LDLRAP1-202ENST00000462394 ABCA10Q8WWZ4 1543 aa7.94□□□□□ -1.14
LDLRAP1-202ENST00000462394 PBRM1Q86U86 1689 aa7.94□□□□□ -1.14
LDLRAP1-202ENST00000462394 PRG4Q92954 1404 aaPredicted RBP7.94□□□□□ -1.14
LDLRAP1-202ENST00000462394 ABCA5Q8WWZ7 1642 aa7.93□□□□□ -1.14
LDLRAP1-202ENST00000462394 MAPK8IP2Q13387 824 aaPredicted RBP7.93□□□□□ -1.14
LDLRAP1-202ENST00000462394 JPH4Q96JJ6 628 aa7.92□□□□□ -1.14
LDLRAP1-202ENST00000462394 FHAD1B1AJZ9 1412 aa7.91□□□□□ -1.14
LDLRAP1-202ENST00000462394 LMTK3Q96Q04 1460 aa7.91□□□□□ -1.14
LDLRAP1-202ENST00000462394 ADAMTS12P58397 1594 aa7.89□□□□□ -1.15
LDLRAP1-202ENST00000462394 SOCS7O14512 581 aa7.89□□□□□ -1.15
LDLRAP1-202ENST00000462394 ADCY10Q96PN6 1610 aa7.88□□□□□ -1.15
LDLRAP1-202ENST00000462394 COL17A1Q9UMD9 1497 aaPredicted RBP7.86□□□□□ -1.15
LDLRAP1-202ENST00000462394 GLI2P10070 1586 aa7.84□□□□□ -1.15
LDLRAP1-202ENST00000462394 ERICH3Q5RHP9 1530 aa7.83□□□□□ -1.16
LDLRAP1-202ENST00000462394 ILDR2Q71H61 639 aa7.83□□□□□ -1.16
LDLRAP1-202ENST00000462394 WRNQ14191 1432 aaPredicted RBP eCLIP7.83□□□□□ -1.16
LDLRAP1-202ENST00000462394 TOP2BQ02880 1626 aa7.81□□□□□ -1.16
LDLRAP1-202ENST00000462394 PLB1Q6P1J6 1458 aa7.81□□□□□ -1.16
LDLRAP1-202ENST00000462394 TSPOAP1O95153 1857 aa7.81□□□□□ -1.16
LDLRAP1-202ENST00000462394 PPRC1Q5VV67 1664 aaKnown RBP7.81□□□□□ -1.16
LDLRAP1-202ENST00000462394 ASXL2Q76L83 1435 aa7.79□□□□□ -1.16
LDLRAP1-202ENST00000462394 RUSC2Q8N2Y8 1516 aa7.79□□□□□ -1.16
LDLRAP1-202ENST00000462394 ABCC2Q92887 1545 aa7.78□□□□□ -1.16
LDLRAP1-202ENST00000462394 TEX14Q8IWB6 1497 aa7.78□□□□□ -1.16
LDLRAP1-202ENST00000462394 KIAA0586Q9BVV6 1533 aa7.77□□□□□ -1.17
LDLRAP1-202ENST00000462394 PTPRGP23470 1445 aa7.77□□□□□ -1.17
LDLRAP1-202ENST00000462394 DISP3Q9P2K9 1392 aa7.76□□□□□ -1.17
LDLRAP1-202ENST00000462394 UHRF1BP1LA0JNW5 1464 aa7.75□□□□□ -1.17
LDLRAP1-202ENST00000462394 MAP3K4Q9Y6R4 1608 aa7.74□□□□□ -1.17
LDLRAP1-202ENST00000462394 EPRSP07814 1512 aaKnown RBP7.74□□□□□ -1.17
LDLRAP1-202ENST00000462394 CERKQ8TCT0 537 aa7.73□□□□□ -1.17
LDLRAP1-202ENST00000462394 PPP4R3CPQ6ZMV5 832 aa7.72□□□□□ -1.17
LDLRAP1-202ENST00000462394 PTPRMP28827 1452 aa7.72□□□□□ -1.17
LDLRAP1-202ENST00000462394 TNIKQ9UKE5 1360 aa7.71□□□□□ -1.17
LDLRAP1-202ENST00000462394 DMRT2Q9Y5R5 561 aa7.71□□□□□ -1.18
LDLRAP1-202ENST00000462394 KDM5BQ9UGL1 1544 aa7.71□□□□□ -1.18
LDLRAP1-202ENST00000462394 PCF11O94913 1555 aaKnown RBP7.7□□□□□ -1.18
LDLRAP1-202ENST00000462394 BIVM-ERCC5R4GMW8 1640 aa7.7□□□□□ -1.18
LDLRAP1-202ENST00000462394 UACAQ9BZF9 1416 aa7.69□□□□□ -1.18
LDLRAP1-202ENST00000462394 MAGI3Q5TCQ9 1506 aa7.69□□□□□ -1.18
LDLRAP1-202ENST00000462394 CARMIL2Q6F5E8 1435 aa7.69□□□□□ -1.18
LDLRAP1-202ENST00000462394 SCAF1Q9H7N4 1312 aaKnown RBP7.68□□□□□ -1.18
LDLRAP1-202ENST00000462394 ADAMTSL3P82987 1691 aa7.67□□□□□ -1.18
LDLRAP1-202ENST00000462394 IGF1RP08069 1367 aa7.65□□□□□ -1.18
LDLRAP1-202ENST00000462394 CD109Q6YHK3 1445 aa7.65□□□□□ -1.18
LDLRAP1-202ENST00000462394 ARAP3Q8WWN8 1544 aa7.65□□□□□ -1.18
LDLRAP1-202ENST00000462394 CUL7Q14999 1698 aa7.64□□□□□ -1.19
LDLRAP1-202ENST00000462394 WDR7Q9Y4E6 1490 aa7.64□□□□□ -1.19
LDLRAP1-202ENST00000462394 KIF21BO75037 1637 aa7.63□□□□□ -1.19
LDLRAP1-202ENST00000462394 SPATA31D1Q6ZQQ2 1576 aa7.63□□□□□ -1.19
LDLRAP1-202ENST00000462394 PHLDB1Q86UU1 1377 aa7.62□□□□□ -1.19
LDLRAP1-202ENST00000462394 TTBK1Q5TCY1 1321 aaPredicted RBP7.61□□□□□ -1.19
LDLRAP1-202ENST00000462394 HSPA2P54652 639 aa7.61□□□□□ -1.19
LDLRAP1-202ENST00000462394 DISP1Q96F81 1524 aa7.61□□□□□ -1.19
LDLRAP1-202ENST00000462394 ZCCHC11Q5TAX3 1644 aaKnown RBP7.6□□□□□ -1.19
LDLRAP1-202ENST00000462394 CFAP43Q8NDM7 1665 aa7.6□□□□□ -1.19
LDLRAP1-202ENST00000462394 BCORL1Q5H9F3 1711 aa7.58□□□□□ -1.2
LDLRAP1-202ENST00000462394 MADDQ8WXG6 1647 aa7.57□□□□□ -1.2
LDLRAP1-202ENST00000462394 KIF27Q86VH2 1401 aa7.57□□□□□ -1.2
LDLRAP1-202ENST00000462394 IQGAP2Q13576 1575 aa7.57□□□□□ -1.2
LDLRAP1-202ENST00000462394 CARMIL1Q5VZK9 1371 aa7.56□□□□□ -1.2
LDLRAP1-202ENST00000462394 YEATS2Q9ULM3 1422 aa7.55□□□□□ -1.2
LDLRAP1-202ENST00000462394 KCNH8Q96L42 1107 aa7.55□□□□□ -1.2
LDLRAP1-202ENST00000462394 UGGT2Q9NYU1 1516 aa7.55□□□□□ -1.2
LDLRAP1-202ENST00000462394 IQSEC2Q5JU85 1478 aa7.54□□□□□ -1.2
LDLRAP1-202ENST00000462394 ARID4BQ4LE39 1312 aaPredicted RBP7.53□□□□□ -1.2
LDLRAP1-202ENST00000462394 RAPGEF3O95398 923 aa7.53□□□□□ -1.2
LDLRAP1-202ENST00000462394 NEO1Q92859 1461 aa7.53□□□□□ -1.2
LDLRAP1-202ENST00000462394 PTPRTO14522 1441 aa7.51□□□□□ -1.21
LDLRAP1-202ENST00000462394 POGZQ7Z3K3 1410 aa7.51□□□□□ -1.21
LDLRAP1-202ENST00000462394 KIAA0556O60303 1618 aa7.5□□□□□ -1.21
LDLRAP1-202ENST00000462394 RIMS1Q86UR5 1692 aaKnown RBP7.5□□□□□ -1.21
LDLRAP1-202ENST00000462394 ABCA8O94911 1581 aa7.5□□□□□ -1.21
LDLRAP1-202ENST00000462394 FRMPD1Q5SYB0 1578 aa7.5□□□□□ -1.21
LDLRAP1-202ENST00000462394 CNKSR2Q8WXI2 1034 aa7.49□□□□□ -1.21
LDLRAP1-202ENST00000462394 ARHGEF40Q8TER5 1519 aa7.48□□□□□ -1.21
LDLRAP1-202ENST00000462394 DCAF8L1A6NGE4 600 aa7.48□□□□□ -1.21
LDLRAP1-202ENST00000462394 ABCA9Q8IUA7 1624 aa7.48□□□□□ -1.21
LDLRAP1-202ENST00000462394 LTBP4Q8N2S1 1624 aa7.48□□□□□ -1.21
LDLRAP1-202ENST00000462394 TTC37Q6PGP7 1564 aa7.47□□□□□ -1.21
LDLRAP1-202ENST00000462394 FHOD3Q2V2M9 1422 aa7.47□□□□□ -1.21
LDLRAP1-202ENST00000462394 FANCAO15360 1455 aa7.47□□□□□ -1.21
LDLRAP1-202ENST00000462394 STRCQ7RTU9 1775 aa7.46□□□□□ -1.22
LDLRAP1-202ENST00000462394 AKNAQ7Z591 1439 aa7.45□□□□□ -1.22
LDLRAP1-202ENST00000462394 DENND4BO75064 1496 aaPredicted RBP7.44□□□□□ -1.22
LDLRAP1-202ENST00000462394 ATP10BO94823 1461 aa7.44□□□□□ -1.22
LDLRAP1-202ENST00000462394 GOLGA3Q08378 1498 aa7.44□□□□□ -1.22
LDLRAP1-202ENST00000462394 MAGI2Q86UL8 1455 aa7.44□□□□□ -1.22
LDLRAP1-202ENST00000462394 HOXD11P31277 338 aaPredicted RBP7.44□□□□□ -1.22
LDLRAP1-202ENST00000462394 PREX1Q8TCU6 1659 aa7.44□□□□□ -1.22
LDLRAP1-202ENST00000462394 RAPGEF2Q9Y4G8 1499 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms