RNA–Protein interactions for RNA: ENST00000462391.5

NPM3-202, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

TSL 3

Gene NPM3, Length 481 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-202ENST00000462391 JPH4Q96JJ6 628 aa36.39■■■■□ 3.42
NPM3-202ENST00000462391 PRG4Q92954 1404 aaPredicted RBP36.37■■■■□ 3.41
NPM3-202ENST00000462391 KIAA0586Q9BVV6 1533 aa36.35■■■■□ 3.41
NPM3-202ENST00000462391 TRHP20396 242 aaPredicted RBP36.25■■■■□ 3.39
NPM3-202ENST00000462391 RAPGEF2Q9Y4G8 1499 aa36.15■■■■□ 3.38
NPM3-202ENST00000462391 IQGAP2Q13576 1575 aa36.07■■■■□ 3.37
NPM3-202ENST00000462391 CARMIL2Q6F5E8 1435 aa36■■■■□ 3.35
NPM3-202ENST00000462391 PRXQ9BXM0 1461 aa35.92■■■■□ 3.34
NPM3-202ENST00000462391 PTPRGP23470 1445 aa35.89■■■■□ 3.34
NPM3-202ENST00000462391 TNIKQ9UKE5 1360 aa35.89■■■■□ 3.34
NPM3-202ENST00000462391 UGGT2Q9NYU1 1516 aa35.88■■■■□ 3.33
NPM3-202ENST00000462391 ADCY10Q96PN6 1610 aa35.87■■■■□ 3.33
NPM3-202ENST00000462391 NPM1P06748 294 aaKnown RBP eCLIP35.86■■■■□ 3.33
NPM3-202ENST00000462391 CTTNBP2Q8WZ74 1663 aa35.84■■■■□ 3.33
NPM3-202ENST00000462391 DISP1Q96F81 1524 aa35.83■■■■□ 3.33
NPM3-202ENST00000462391 EEA1Q15075 1411 aa35.79■■■■□ 3.32
NPM3-202ENST00000462391 MAPKBP1O60336 1514 aa35.78■■■■□ 3.32
NPM3-202ENST00000462391 CSRNP3Q8WYN3 585 aa35.75■■■■□ 3.31
NPM3-202ENST00000462391 KIAA0556O60303 1618 aa35.72■■■■□ 3.31
NPM3-202ENST00000462391 TTBK1Q5TCY1 1321 aaPredicted RBP35.69■■■■□ 3.3
NPM3-202ENST00000462391 KIF13AQ9H1H9 1805 aa35.69■■■■□ 3.3
NPM3-202ENST00000462391 UHRF1BP1LA0JNW5 1464 aa35.67■■■■□ 3.3
NPM3-202ENST00000462391 GOLGA3Q08378 1498 aa35.67■■■■□ 3.3
NPM3-202ENST00000462391 ABCC10Q5T3U5 1492 aa35.66■■■■□ 3.3
NPM3-202ENST00000462391 ABCC2Q92887 1545 aa35.65■■■■□ 3.3
NPM3-202ENST00000462391 UACAQ9BZF9 1416 aa35.64■■■■□ 3.3
NPM3-202ENST00000462391 DIP2BQ9P265 1576 aa35.57■■■■□ 3.28
NPM3-202ENST00000462391 FAM69CQ0P6D2 419 aa35.55■■■■□ 3.28
NPM3-202ENST00000462391 CHIC1Q5VXU3 224 aa35.52■■■■□ 3.28
NPM3-202ENST00000462391 KDM5BQ9UGL1 1544 aa35.48■■■■□ 3.27
NPM3-202ENST00000462391 PLB1Q6P1J6 1458 aa35.47■■■■□ 3.27
NPM3-202ENST00000462391 FAM9AQ8IZU1 332 aaPredicted RBP35.44■■■■□ 3.26
NPM3-202ENST00000462391 ASXL2Q76L83 1435 aa35.43■■■■□ 3.26
NPM3-202ENST00000462391 KIF21BO75037 1637 aa35.42■■■■□ 3.26
NPM3-202ENST00000462391 ZCCHC11Q5TAX3 1644 aaKnown RBP35.37■■■■□ 3.25
NPM3-202ENST00000462391 ABCA8O94911 1581 aa35.37■■■■□ 3.25
NPM3-202ENST00000462391 SAMD9Q5K651 1589 aa35.35■■■■□ 3.25
NPM3-202ENST00000462391 GLI2P10070 1586 aa35.33■■■■□ 3.25
NPM3-202ENST00000462391 P3H3Q8IVL6 736 aa35.25■■■■□ 3.23
NPM3-202ENST00000462391 TSPOAP1O95153 1857 aa35.24■■■■□ 3.23
NPM3-202ENST00000462391 EPRSP07814 1512 aaKnown RBP35.23■■■■□ 3.23
NPM3-202ENST00000462391 WDR7Q9Y4E6 1490 aa35.21■■■■□ 3.23
NPM3-202ENST00000462391 EFCAB5A4FU69 1503 aa35.15■■■■□ 3.22
NPM3-202ENST00000462391 KDM6BO15054 1643 aa35.13■■■■□ 3.21
NPM3-202ENST00000462391 MAP3K4Q9Y6R4 1608 aa35.13■■■■□ 3.21
NPM3-202ENST00000462391 RANGAP1P46060 587 aaPredicted RBP35.1■■■■□ 3.21
NPM3-202ENST00000462391 PPRC1Q5VV67 1664 aaKnown RBP35.1■■■■□ 3.21
NPM3-202ENST00000462391 RAPGEF6Q8TEU7 1601 aa35.1■■■■□ 3.21
NPM3-202ENST00000462391 FHOD3Q2V2M9 1422 aa35.07■■■■□ 3.21
NPM3-202ENST00000462391 UBTFP17480 764 aaKnown RBP35.07■■■■□ 3.2
NPM3-202ENST00000462391 ATP10BO94823 1461 aa35.06■■■■□ 3.2
NPM3-202ENST00000462391 TEX14Q8IWB6 1497 aa35.03■■■■□ 3.2
NPM3-202ENST00000462391 CFAP43Q8NDM7 1665 aa34.98■■■■□ 3.19
NPM3-202ENST00000462391 ARID3CA6NKF2 412 aa34.96■■■■□ 3.19
NPM3-202ENST00000462391 KCNH8Q96L42 1107 aa34.96■■■■□ 3.19
NPM3-202ENST00000462391 NUP153P49790 1475 aaKnown RBP34.96■■■■□ 3.19
NPM3-202ENST00000462391 EHMT2Q96KQ7 1210 aa34.95■■■■□ 3.19
NPM3-202ENST00000462391 CD109Q6YHK3 1445 aa34.92■■■■□ 3.18
NPM3-202ENST00000462391 MAGI3Q5TCQ9 1506 aa34.91■■■■□ 3.18
NPM3-202ENST00000462391 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.85■■■■□ 3.17
NPM3-202ENST00000462391 HNRNPUL2Q1KMD3 747 aaKnown RBP34.85■■■■□ 3.17
NPM3-202ENST00000462391 ARHGAP35Q9NRY4 1499 aa34.84■■■■□ 3.17
NPM3-202ENST00000462391 FMN1Q68DA7 1419 aa34.82■■■■□ 3.17
NPM3-202ENST00000462391 ABCA9Q8IUA7 1624 aa34.8■■■■□ 3.16
NPM3-202ENST00000462391 COL17A1Q9UMD9 1497 aaPredicted RBP34.78■■■■□ 3.16
NPM3-202ENST00000462391 AEBP2Q6ZN18 517 aaPredicted RBP34.78■■■■□ 3.16
NPM3-202ENST00000462391 PLEKHD1A6NEE1 506 aa34.73■■■■□ 3.15
NPM3-202ENST00000462391 HECW1Q76N89 1606 aa34.69■■■■□ 3.14
NPM3-202ENST00000462391 PHLDB1Q86UU1 1377 aa34.66■■■■□ 3.14
NPM3-202ENST00000462391 CDK13Q14004 1512 aaKnown RBP34.63■■■■□ 3.13
NPM3-202ENST00000462391 ARAP3Q8WWN8 1544 aa34.62■■■■□ 3.13
NPM3-202ENST00000462391 NEO1Q92859 1461 aa34.58■■■■□ 3.13
NPM3-202ENST00000462391 ATP1B4Q9UN42 357 aaPredicted RBP34.57■■■■□ 3.12
NPM3-202ENST00000462391 CDK11AQ9UQ88 783 aaPredicted RBP34.53■■■■□ 3.12
NPM3-202ENST00000462391 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.53■■■■□ 3.12
NPM3-202ENST00000462391 CLIP1P30622 1438 aa34.5■■■■□ 3.11
NPM3-202ENST00000462391 CASKIN1Q8WXD9 1431 aa34.48■■■■□ 3.11
NPM3-202ENST00000462391 KDM4FA0A1W2PPD8 638 aa34.47■■■■□ 3.11
NPM3-202ENST00000462391 TTC37Q6PGP7 1564 aa34.47■■■■□ 3.11
NPM3-202ENST00000462391 CFAP74Q9C0B2 1584 aa34.45■■■■□ 3.11
NPM3-202ENST00000462391 PCF11O94913 1555 aaKnown RBP34.44■■■■□ 3.1
NPM3-202ENST00000462391 CCDC18Q5T9S5 1454 aa34.42■■■■□ 3.1
NPM3-202ENST00000462391 LRRIQ1Q96JM4 1722 aa34.41■■■■□ 3.1
NPM3-202ENST00000462391 FANCAO15360 1455 aa34.41■■■■□ 3.1
NPM3-202ENST00000462391 TROQ12816 1431 aaPredicted RBP34.4■■■■□ 3.1
NPM3-202ENST00000462391 FYCO1Q9BQS8 1478 aa34.39■■■■□ 3.1
NPM3-202ENST00000462391 ADGRL1O94910 1474 aa34.38■■■■□ 3.09
NPM3-202ENST00000462391 KIF14Q15058 1648 aa34.37■■■■□ 3.09
NPM3-202ENST00000462391 AKNAQ7Z591 1439 aa34.36■■■■□ 3.09
NPM3-202ENST00000462391 PLCH2O75038 1416 aa34.35■■■■□ 3.09
NPM3-202ENST00000462391 RAPGEF3O95398 923 aa34.34■■■■□ 3.09
NPM3-202ENST00000462391 DENND4BO75064 1496 aaPredicted RBP34.32■■■■□ 3.08
NPM3-202ENST00000462391 FRMPD1Q5SYB0 1578 aa34.32■■■■□ 3.08
NPM3-202ENST00000462391 MYO5CQ9NQX4 1742 aa34.3■■■■□ 3.08
NPM3-202ENST00000462391 RICTORQ6R327 1708 aa34.26■■■■□ 3.07
NPM3-202ENST00000462391 CEP162Q5TB80 1403 aa34.23■■■■□ 3.07
NPM3-202ENST00000462391 EFCAB2Q5VUJ9 269 aa34.22■■■■□ 3.07
NPM3-202ENST00000462391 ZMYM4Q5VZL5 1548 aa34.18■■■■□ 3.06
NPM3-202ENST00000462391 ARHGEF40Q8TER5 1519 aa34.15■■■■□ 3.06
NPM3-202ENST00000462391 SCAPERQ9BY12 1400 aa34.15■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms