RNA–Protein interactions for RNA: ENST00000462324.2

PHGDH-203, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 5

Gene PHGDH, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-203ENST00000462324 KIF21BO75037 1637 aa21.49■■□□□ 1.03
PHGDH-203ENST00000462324 UBTFP17480 764 aaKnown RBP21.45■■□□□ 1.02
PHGDH-203ENST00000462324 GOLGA3Q08378 1498 aa21.45■■□□□ 1.02
PHGDH-203ENST00000462324 IQGAP2Q13576 1575 aa21.4■■□□□ 1.02
PHGDH-203ENST00000462324 PRG4Q92954 1404 aaPredicted RBP21.4■■□□□ 1.02
PHGDH-203ENST00000462324 EHMT2Q96KQ7 1210 aa21.4■■□□□ 1.02
PHGDH-203ENST00000462324 ARHGEF11O15085 1522 aa21.39■■□□□ 1.02
PHGDH-203ENST00000462324 SHROOM2Q13796 1616 aa21.39■■□□□ 1.01
PHGDH-203ENST00000462324 CARMIL2Q6F5E8 1435 aa21.36■■□□□ 1.01
PHGDH-203ENST00000462324 RIMBP3CA6NJZ7 1639 aa21.34■■□□□ 1.01
PHGDH-203ENST00000462324 RIMBP3BA6NNM3 1639 aa21.34■■□□□ 1.01
PHGDH-203ENST00000462324 RIMBP3Q9UFD9 1639 aa21.34■■□□□ 1.01
PHGDH-203ENST00000462324 CTTNBP2Q8WZ74 1663 aa21.34■■□□□ 1.01
PHGDH-203ENST00000462324 UGGT2Q9NYU1 1516 aa21.32■■□□□ 1
PHGDH-203ENST00000462324 CYB5RLQ6IPT4 315 aa21.28■■□□□ 1
PHGDH-203ENST00000462324 TNIKQ9UKE5 1360 aa21.27■■□□□ 1
PHGDH-203ENST00000462324 ERCC6L2Q5T890 1561 aa21.25■□□□□ 0.99
PHGDH-203ENST00000462324 RANGAP1P46060 587 aaPredicted RBP21.24■□□□□ 0.99
PHGDH-203ENST00000462324 DISP1Q96F81 1524 aa21.24■□□□□ 0.99
PHGDH-203ENST00000462324 ARAP1Q96P48 1450 aa21.23■□□□□ 0.99
PHGDH-203ENST00000462324 PTPRGP23470 1445 aa21.22■□□□□ 0.99
PHGDH-203ENST00000462324 LOC105371045A0A1W2PR82 267 aa21.22■□□□□ 0.99
PHGDH-203ENST00000462324 P3H3Q8IVL6 736 aa21.18■□□□□ 0.98
PHGDH-203ENST00000462324 KIAA0556O60303 1618 aa21.18■□□□□ 0.98
PHGDH-203ENST00000462324 TTBK1Q5TCY1 1321 aaPredicted RBP21.16■□□□□ 0.98
PHGDH-203ENST00000462324 EFCAB5A4FU69 1503 aa21.14■□□□□ 0.98
PHGDH-203ENST00000462324 SAMD9Q5K651 1589 aa21.12■□□□□ 0.97
PHGDH-203ENST00000462324 CLIP1P30622 1438 aa21.08■□□□□ 0.97
PHGDH-203ENST00000462324 NPM1P06748 294 aaKnown RBP eCLIP21.07■□□□□ 0.96
PHGDH-203ENST00000462324 ARHGAP35Q9NRY4 1499 aa21.07■□□□□ 0.96
PHGDH-203ENST00000462324 UACAQ9BZF9 1416 aa21.06■□□□□ 0.96
PHGDH-203ENST00000462324 FHOD3Q2V2M9 1422 aa21.05■□□□□ 0.96
PHGDH-203ENST00000462324 CEP162Q5TB80 1403 aa21.03■□□□□ 0.96
PHGDH-203ENST00000462324 UHRF1BP1LA0JNW5 1464 aa21.02■□□□□ 0.96
PHGDH-203ENST00000462324 FMN1Q68DA7 1419 aa21.01■□□□□ 0.95
PHGDH-203ENST00000462324 PLB1Q6P1J6 1458 aa20.98■□□□□ 0.95
PHGDH-203ENST00000462324 ABCC2Q92887 1545 aa20.97■□□□□ 0.95
PHGDH-203ENST00000462324 ABCA8O94911 1581 aa20.95■□□□□ 0.94
PHGDH-203ENST00000462324 TRHP20396 242 aaPredicted RBP20.94■□□□□ 0.94
PHGDH-203ENST00000462324 ADCY10Q96PN6 1610 aa20.93■□□□□ 0.94
PHGDH-203ENST00000462324 ATP1B4Q9UN42 357 aaPredicted RBP20.9■□□□□ 0.94
PHGDH-203ENST00000462324 KDM5BQ9UGL1 1544 aa20.89■□□□□ 0.94
PHGDH-203ENST00000462324 RAPGEF6Q8TEU7 1601 aa20.89■□□□□ 0.93
PHGDH-203ENST00000462324 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.86■□□□□ 0.93
PHGDH-203ENST00000462324 HNRNPUL2Q1KMD3 747 aaKnown RBP20.86■□□□□ 0.93
PHGDH-203ENST00000462324 CASKIN1Q8WXD9 1431 aa20.85■□□□□ 0.93
PHGDH-203ENST00000462324 ATP10BO94823 1461 aa20.83■□□□□ 0.93
PHGDH-203ENST00000462324 NUP153P49790 1475 aaKnown RBP20.83■□□□□ 0.93
PHGDH-203ENST00000462324 ARID3CA6NKF2 412 aa20.82■□□□□ 0.92
PHGDH-203ENST00000462324 MAPKBP1O60336 1514 aa20.81■□□□□ 0.92
PHGDH-203ENST00000462324 CDK11AQ9UQ88 783 aaPredicted RBP20.8■□□□□ 0.92
PHGDH-203ENST00000462324 PLEKHD1A6NEE1 506 aa20.79■□□□□ 0.92
PHGDH-203ENST00000462324 ASXL2Q76L83 1435 aa20.78■□□□□ 0.92
PHGDH-203ENST00000462324 HECW1Q76N89 1606 aa20.78■□□□□ 0.92
PHGDH-203ENST00000462324 FYCO1Q9BQS8 1478 aa20.78■□□□□ 0.92
PHGDH-203ENST00000462324 VPS8Q8N3P4 1428 aa20.78■□□□□ 0.92
PHGDH-203ENST00000462324 ZCCHC11Q5TAX3 1644 aaKnown RBP20.77■□□□□ 0.92
PHGDH-203ENST00000462324 EPRSP07814 1512 aaKnown RBP20.75■□□□□ 0.91
PHGDH-203ENST00000462324 CCDC18Q5T9S5 1454 aa20.73■□□□□ 0.91
PHGDH-203ENST00000462324 PCF11O94913 1555 aaKnown RBP20.72■□□□□ 0.91
PHGDH-203ENST00000462324 WDR7Q9Y4E6 1490 aa20.71■□□□□ 0.91
PHGDH-203ENST00000462324 FAM69CQ0P6D2 419 aa20.71■□□□□ 0.91
PHGDH-203ENST00000462324 ABCC10Q5T3U5 1492 aa20.7■□□□□ 0.9
PHGDH-203ENST00000462324 KCNH8Q96L42 1107 aa20.7■□□□□ 0.9
PHGDH-203ENST00000462324 APLP2Q06481 763 aa20.68■□□□□ 0.9
PHGDH-203ENST00000462324 CDK13Q14004 1512 aaKnown RBP20.68■□□□□ 0.9
PHGDH-203ENST00000462324 TROQ12816 1431 aaPredicted RBP20.61■□□□□ 0.89
PHGDH-203ENST00000462324 GLI2P10070 1586 aa20.6■□□□□ 0.89
PHGDH-203ENST00000462324 DIP2BQ9P265 1576 aa20.59■□□□□ 0.89
PHGDH-203ENST00000462324 MAP3K1Q13233 1512 aa20.58■□□□□ 0.89
PHGDH-203ENST00000462324 MTUS2Q5JR59 1369 aa20.58■□□□□ 0.88
PHGDH-203ENST00000462324 LRRIQ1Q96JM4 1722 aa20.56■□□□□ 0.88
PHGDH-203ENST00000462324 CD109Q6YHK3 1445 aa20.53■□□□□ 0.88
PHGDH-203ENST00000462324 TIAM1Q13009 1591 aa20.51■□□□□ 0.87
PHGDH-203ENST00000462324 KIF13AQ9H1H9 1805 aa20.5■□□□□ 0.87
PHGDH-203ENST00000462324 MAGI3Q5TCQ9 1506 aa20.48■□□□□ 0.87
PHGDH-203ENST00000462324 KIF14Q15058 1648 aa20.48■□□□□ 0.87
PHGDH-203ENST00000462324 ABCA9Q8IUA7 1624 aa20.48■□□□□ 0.87
PHGDH-203ENST00000462324 EHBP1L1Q8N3D4 1523 aa20.48■□□□□ 0.87
PHGDH-203ENST00000462324 KANK4Q5T7N3 995 aaPredicted RBP20.47■□□□□ 0.87
PHGDH-203ENST00000462324 LRRC9Q6ZRR7 1453 aa20.47■□□□□ 0.87
PHGDH-203ENST00000462324 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.47■□□□□ 0.876e-6■■■■■ 38.2
PHGDH-203ENST00000462324 MAP3K4Q9Y6R4 1608 aa20.46■□□□□ 0.87
PHGDH-203ENST00000462324 CFAP43Q8NDM7 1665 aa20.46■□□□□ 0.87
PHGDH-203ENST00000462324 TEX14Q8IWB6 1497 aa20.46■□□□□ 0.87
PHGDH-203ENST00000462324 PLCH2O75038 1416 aa20.44■□□□□ 0.86
PHGDH-203ENST00000462324 PHLDB1Q86UU1 1377 aa20.43■□□□□ 0.86
PHGDH-203ENST00000462324 EFCAB2Q5VUJ9 269 aa20.42■□□□□ 0.86
PHGDH-203ENST00000462324 CCNB3Q8WWL7 1395 aa20.42■□□□□ 0.86
PHGDH-203ENST00000462324 TTC37Q6PGP7 1564 aa20.38■□□□□ 0.85
PHGDH-203ENST00000462324 ARAP3Q8WWN8 1544 aa20.37■□□□□ 0.85
PHGDH-203ENST00000462324 NCOA2Q15596 1464 aa20.37■□□□□ 0.85
PHGDH-203ENST00000462324 NEO1Q92859 1461 aa20.37■□□□□ 0.85
PHGDH-203ENST00000462324 CFDP1Q9UEE9 299 aaPredicted RBP20.36■□□□□ 0.85
PHGDH-203ENST00000462324 SUPT6HQ7KZ85 1726 aaKnown RBP20.36■□□□□ 0.85
PHGDH-203ENST00000462324 GPATCH8Q9UKJ3 1502 aaKnown RBP20.35■□□□□ 0.85
PHGDH-203ENST00000462324 FANCAO15360 1455 aa20.35■□□□□ 0.85
PHGDH-203ENST00000462324 TSPOAP1O95153 1857 aa20.35■□□□□ 0.85
PHGDH-203ENST00000462324 PPRC1Q5VV67 1664 aaKnown RBP20.32■□□□□ 0.84
PHGDH-203ENST00000462324 ARHGAP5Q13017 1502 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms