RNA–Protein interactions for RNA: ENST00000462112.1

SSR1-203, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4 BASIC

Gene SSR1, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-203ENST00000462112 EEA1Q15075 1411 aa13.6□□□□□ -0.23
SSR1-203ENST00000462112 NUP160Q12769 1436 aa13.57□□□□□ -0.24
SSR1-203ENST00000462112 CLASP1Q7Z460 1538 aa13.57□□□□□ -0.24
SSR1-203ENST00000462112 RAPGEF2Q9Y4G8 1499 aa13.55□□□□□ -0.24
SSR1-203ENST00000462112 ARHGEF11O15085 1522 aa13.55□□□□□ -0.24
SSR1-203ENST00000462112 CSRNP3Q8WYN3 585 aa13.54□□□□□ -0.24
SSR1-203ENST00000462112 CEP170Q5SW79 1584 aa13.53□□□□□ -0.24
SSR1-203ENST00000462112 RIMBP3CA6NJZ7 1639 aa13.53□□□□□ -0.24
SSR1-203ENST00000462112 RIMBP3BA6NNM3 1639 aa13.53□□□□□ -0.24
SSR1-203ENST00000462112 RIMBP3Q9UFD9 1639 aa13.53□□□□□ -0.24
SSR1-203ENST00000462112 JPH4Q96JJ6 628 aa13.52□□□□□ -0.25
SSR1-203ENST00000462112 KIAA0586Q9BVV6 1533 aa13.51□□□□□ -0.25
SSR1-203ENST00000462112 FAM9AQ8IZU1 332 aaPredicted RBP13.51□□□□□ -0.25
SSR1-203ENST00000462112 RUSC2Q8N2Y8 1516 aa13.5□□□□□ -0.25
SSR1-203ENST00000462112 CYB5RLQ6IPT4 315 aa13.5□□□□□ -0.25
SSR1-203ENST00000462112 CARMIL2Q6F5E8 1435 aa13.47□□□□□ -0.25
SSR1-203ENST00000462112 PRG4Q92954 1404 aaPredicted RBP13.46□□□□□ -0.26
SSR1-203ENST00000462112 PRXQ9BXM0 1461 aa13.44□□□□□ -0.26
SSR1-203ENST00000462112 SHROOM2Q13796 1616 aa13.44□□□□□ -0.26
SSR1-203ENST00000462112 IQGAP2Q13576 1575 aa13.43□□□□□ -0.26
SSR1-203ENST00000462112 ARAP1Q96P48 1450 aa13.42□□□□□ -0.26
SSR1-203ENST00000462112 PPP4R3CPQ6ZMV5 832 aa13.4□□□□□ -0.26
SSR1-203ENST00000462112 NPM1P06748 294 aaKnown RBP eCLIP13.39□□□□□ -0.27
SSR1-203ENST00000462112 CTTNBP2Q8WZ74 1663 aa13.38□□□□□ -0.27
SSR1-203ENST00000462112 GOLGA3Q08378 1498 aa13.38□□□□□ -0.27
SSR1-203ENST00000462112 UBTFP17480 764 aaKnown RBP13.36□□□□□ -0.27
SSR1-203ENST00000462112 KIF21BO75037 1637 aa13.35□□□□□ -0.27
SSR1-203ENST00000462112 TNIKQ9UKE5 1360 aa13.35□□□□□ -0.27
SSR1-203ENST00000462112 PTPRGP23470 1445 aa13.34□□□□□ -0.27
SSR1-203ENST00000462112 UGGT2Q9NYU1 1516 aa13.34□□□□□ -0.27
SSR1-203ENST00000462112 ERCC6L2Q5T890 1561 aa13.32□□□□□ -0.28
SSR1-203ENST00000462112 TTBK1Q5TCY1 1321 aaPredicted RBP13.31□□□□□ -0.28
SSR1-203ENST00000462112 TRHP20396 242 aaPredicted RBP13.28□□□□□ -0.28
SSR1-203ENST00000462112 KIAA0556O60303 1618 aa13.26□□□□□ -0.29
SSR1-203ENST00000462112 DISP1Q96F81 1524 aa13.26□□□□□ -0.29
SSR1-203ENST00000462112 EHMT2Q96KQ7 1210 aa13.26□□□□□ -0.29
SSR1-203ENST00000462112 RANGAP1P46060 587 aaPredicted RBP13.25□□□□□ -0.29
SSR1-203ENST00000462112 UACAQ9BZF9 1416 aa13.23□□□□□ -0.29
SSR1-203ENST00000462112 EFCAB5A4FU69 1503 aa13.22□□□□□ -0.29
SSR1-203ENST00000462112 P3H3Q8IVL6 736 aa13.21□□□□□ -0.29
SSR1-203ENST00000462112 UHRF1BP1LA0JNW5 1464 aa13.19□□□□□ -0.3
SSR1-203ENST00000462112 ABCC2Q92887 1545 aa13.18□□□□□ -0.3
SSR1-203ENST00000462112 SAMD9Q5K651 1589 aa13.17□□□□□ -0.3
SSR1-203ENST00000462112 ADCY10Q96PN6 1610 aa13.17□□□□□ -0.3
SSR1-203ENST00000462112 MAPKBP1O60336 1514 aa13.14□□□□□ -0.31
SSR1-203ENST00000462112 PLB1Q6P1J6 1458 aa13.14□□□□□ -0.31
SSR1-203ENST00000462112 FMN1Q68DA7 1419 aa13.13□□□□□ -0.31
SSR1-203ENST00000462112 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.13□□□□□ -0.31
SSR1-203ENST00000462112 HNRNPUL2Q1KMD3 747 aaKnown RBP13.13□□□□□ -0.31
SSR1-203ENST00000462112 FAM69CQ0P6D2 419 aa13.11□□□□□ -0.31
SSR1-203ENST00000462112 KDM5BQ9UGL1 1544 aa13.11□□□□□ -0.31
SSR1-203ENST00000462112 FHOD3Q2V2M9 1422 aa13.11□□□□□ -0.31
SSR1-203ENST00000462112 ABCA8O94911 1581 aa13.11□□□□□ -0.31
SSR1-203ENST00000462112 NCBP3Q53F19 620 aaKnown RBP13.1□□□□□ -0.31
SSR1-203ENST00000462112 ATP1B4Q9UN42 357 aaPredicted RBP13.09□□□□□ -0.31
SSR1-203ENST00000462112 RAPGEF6Q8TEU7 1601 aa13.09□□□□□ -0.31
SSR1-203ENST00000462112 CLIP1P30622 1438 aa13.08□□□□□ -0.32
SSR1-203ENST00000462112 ASXL2Q76L83 1435 aa13.08□□□□□ -0.32
SSR1-203ENST00000462112 CDK11AQ9UQ88 783 aaPredicted RBP13.08□□□□□ -0.32
SSR1-203ENST00000462112 ABCC10Q5T3U5 1492 aa13.08□□□□□ -0.32
SSR1-203ENST00000462112 ZCCHC11Q5TAX3 1644 aaKnown RBP13.06□□□□□ -0.32
SSR1-203ENST00000462112 ARHGAP35Q9NRY4 1499 aa13.06□□□□□ -0.32
SSR1-203ENST00000462112 PLEKHD1A6NEE1 506 aa13.06□□□□□ -0.32
SSR1-203ENST00000462112 CACNB1Q02641 598 aaPredicted RBP13.06□□□□□ -0.32
SSR1-203ENST00000462112 WDR7Q9Y4E6 1490 aa13.04□□□□□ -0.32
SSR1-203ENST00000462112 ARID3CA6NKF2 412 aa13.03□□□□□ -0.32
SSR1-203ENST00000462112 KCNH8Q96L42 1107 aa13.02□□□□□ -0.33
SSR1-203ENST00000462112 HECW1Q76N89 1606 aa13.02□□□□□ -0.33
SSR1-203ENST00000462112 ATP10BO94823 1461 aa13.01□□□□□ -0.33
SSR1-203ENST00000462112 DIP2BQ9P265 1576 aa13.01□□□□□ -0.33
SSR1-203ENST00000462112 CEP162Q5TB80 1403 aa13□□□□□ -0.33
SSR1-203ENST00000462112 LOC105371045A0A1W2PR82 267 aa13□□□□□ -0.33
SSR1-203ENST00000462112 NPM3O75607 178 aaKnown RBP13□□□□□ -0.33
SSR1-203ENST00000462112 GLI2P10070 1586 aa12.99□□□□□ -0.33
SSR1-203ENST00000462112 NUP153P49790 1475 aaKnown RBP12.99□□□□□ -0.33
SSR1-203ENST00000462112 SLC4A1APQ9BWU0 796 aaKnown RBP12.99□□□□□ -0.33
SSR1-203ENST00000462112 KIF13AQ9H1H9 1805 aa12.99□□□□□ -0.33
SSR1-203ENST00000462112 EPRSP07814 1512 aaKnown RBP12.98□□□□□ -0.33
SSR1-203ENST00000462112 TEX14Q8IWB6 1497 aa12.97□□□□□ -0.33
SSR1-203ENST00000462112 CCDC18Q5T9S5 1454 aa12.97□□□□□ -0.33
SSR1-203ENST00000462112 CASKIN1Q8WXD9 1431 aa12.96□□□□□ -0.33
SSR1-203ENST00000462112 FYCO1Q9BQS8 1478 aa12.95□□□□□ -0.34
SSR1-203ENST00000462112 CD109Q6YHK3 1445 aa12.94□□□□□ -0.34
SSR1-203ENST00000462112 APLP2Q06481 763 aa12.93□□□□□ -0.34
SSR1-203ENST00000462112 TSPOAP1O95153 1857 aa12.93□□□□□ -0.34
SSR1-203ENST00000462112 CFAP43Q8NDM7 1665 aa12.93□□□□□ -0.34
SSR1-203ENST00000462112 SCAF1Q9H7N4 1312 aaKnown RBP12.91□□□□□ -0.34
SSR1-203ENST00000462112 PHLDB1Q86UU1 1377 aa12.91□□□□□ -0.34
SSR1-203ENST00000462112 CNKSR2Q8WXI2 1034 aa12.9□□□□□ -0.34
SSR1-203ENST00000462112 MAP3K4Q9Y6R4 1608 aa12.9□□□□□ -0.34
SSR1-203ENST00000462112 PCF11O94913 1555 aaKnown RBP12.9□□□□□ -0.35
SSR1-203ENST00000462112 CDK13Q14004 1512 aaKnown RBP12.89□□□□□ -0.35
SSR1-203ENST00000462112 MAGI3Q5TCQ9 1506 aa12.88□□□□□ -0.35
SSR1-203ENST00000462112 ABCA9Q8IUA7 1624 aa12.88□□□□□ -0.35
SSR1-203ENST00000462112 TROQ12816 1431 aaPredicted RBP12.88□□□□□ -0.35
SSR1-203ENST00000462112 KDM6BO15054 1643 aa12.87□□□□□ -0.35
SSR1-203ENST00000462112 MTUS2Q5JR59 1369 aa12.86□□□□□ -0.35
SSR1-203ENST00000462112 VPS8Q8N3P4 1428 aa12.86□□□□□ -0.35
SSR1-203ENST00000462112 KIF14Q15058 1648 aa12.85□□□□□ -0.35
SSR1-203ENST00000462112 CFAP74Q9C0B2 1584 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms