RNA–Protein interactions for RNA: ENST00000461903.1

HLA-A-205, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,352 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-205ENST00000461903 RAPGEF2Q9Y4G8 1499 aa36.97■■■■□ 3.51
HLA-A-205ENST00000461903 PRXQ9BXM0 1461 aa36.95■■■■□ 3.51
HLA-A-205ENST00000461903 TRHP20396 242 aaPredicted RBP36.93■■■■□ 3.5
HLA-A-205ENST00000461903 KIF21BO75037 1637 aa36.87■■■■□ 3.49
HLA-A-205ENST00000461903 CEP170Q5SW79 1584 aa36.8■■■■□ 3.48
HLA-A-205ENST00000461903 NUP160Q12769 1436 aa36.8■■■■□ 3.48
HLA-A-205ENST00000461903 GOLGA3Q08378 1498 aa36.7■■■■□ 3.47
HLA-A-205ENST00000461903 CTTNBP2Q8WZ74 1663 aa36.65■■■■□ 3.46
HLA-A-205ENST00000461903 EHMT2Q96KQ7 1210 aa36.63■■■■□ 3.45
HLA-A-205ENST00000461903 KIAA0586Q9BVV6 1533 aa36.62■■■■□ 3.45
HLA-A-205ENST00000461903 IQGAP2Q13576 1575 aa36.56■■■■□ 3.44
HLA-A-205ENST00000461903 UBTFP17480 764 aaKnown RBP36.53■■■■□ 3.44
HLA-A-205ENST00000461903 SHROOM2Q13796 1616 aa36.47■■■■□ 3.43
HLA-A-205ENST00000461903 JPH4Q96JJ6 628 aa36.4■■■■□ 3.42
HLA-A-205ENST00000461903 UGGT2Q9NYU1 1516 aa36.34■■■■□ 3.41
HLA-A-205ENST00000461903 PRG4Q92954 1404 aaPredicted RBP36.32■■■■□ 3.41
HLA-A-205ENST00000461903 ERCC6L2Q5T890 1561 aa36.32■■■■□ 3.4
HLA-A-205ENST00000461903 TNIKQ9UKE5 1360 aa36.29■■■■□ 3.4
HLA-A-205ENST00000461903 LOC105371045A0A1W2PR82 267 aa36.27■■■■□ 3.4
HLA-A-205ENST00000461903 CARMIL2Q6F5E8 1435 aa36.25■■■■□ 3.39
HLA-A-205ENST00000461903 RANGAP1P46060 587 aaPredicted RBP36.23■■■■□ 3.39
HLA-A-205ENST00000461903 KIAA0556O60303 1618 aa36.21■■■■□ 3.39
HLA-A-205ENST00000461903 DISP1Q96F81 1524 aa36.19■■■■□ 3.38
HLA-A-205ENST00000461903 AEBP2Q6ZN18 517 aaPredicted RBP36.16■■■■□ 3.38
HLA-A-205ENST00000461903 SAMD9Q5K651 1589 aa36.16■■■■□ 3.38
HLA-A-205ENST00000461903 EFCAB5A4FU69 1503 aa36.15■■■■□ 3.38
HLA-A-205ENST00000461903 CLIP1P30622 1438 aa36.03■■■■□ 3.36
HLA-A-205ENST00000461903 P3H3Q8IVL6 736 aa36.02■■■■□ 3.36
HLA-A-205ENST00000461903 CEP162Q5TB80 1403 aa36.02■■■■□ 3.36
HLA-A-205ENST00000461903 ARHGAP35Q9NRY4 1499 aa36.01■■■■□ 3.35
HLA-A-205ENST00000461903 TTBK1Q5TCY1 1321 aaPredicted RBP35.98■■■■□ 3.35
HLA-A-205ENST00000461903 PTPRGP23470 1445 aa35.97■■■■□ 3.35
HLA-A-205ENST00000461903 FHOD3Q2V2M9 1422 aa35.97■■■■□ 3.35
HLA-A-205ENST00000461903 KIF13AQ9H1H9 1805 aa35.92■■■■□ 3.34
HLA-A-205ENST00000461903 FMN1Q68DA7 1419 aa35.79■■■■□ 3.32
HLA-A-205ENST00000461903 UACAQ9BZF9 1416 aa35.76■■■■□ 3.31
HLA-A-205ENST00000461903 PLB1Q6P1J6 1458 aa35.74■■■■□ 3.31
HLA-A-205ENST00000461903 ABCA8O94911 1581 aa35.73■■■■□ 3.31
HLA-A-205ENST00000461903 RAPGEF6Q8TEU7 1601 aa35.72■■■■□ 3.31
HLA-A-205ENST00000461903 ABCC10Q5T3U5 1492 aa35.71■■■■□ 3.31
HLA-A-205ENST00000461903 MAPKBP1O60336 1514 aa35.71■■■■□ 3.31
HLA-A-205ENST00000461903 ABCC2Q92887 1545 aa35.71■■■■□ 3.31
HLA-A-205ENST00000461903 ADCY10Q96PN6 1610 aa35.71■■■■□ 3.31
HLA-A-205ENST00000461903 UHRF1BP1LA0JNW5 1464 aa35.68■■■■□ 3.3
HLA-A-205ENST00000461903 DIP2BQ9P265 1576 aa35.62■■■■□ 3.29
HLA-A-205ENST00000461903 NPM1P06748 294 aaKnown RBP eCLIP35.61■■■■□ 3.29
HLA-A-205ENST00000461903 FAM69CQ0P6D2 419 aa35.61■■■■□ 3.29
HLA-A-205ENST00000461903 PCF11O94913 1555 aaKnown RBP35.6■■■■□ 3.29
HLA-A-205ENST00000461903 HECW1Q76N89 1606 aa35.6■■■■□ 3.29
HLA-A-205ENST00000461903 VPS8Q8N3P4 1428 aa35.55■■■■□ 3.28
HLA-A-205ENST00000461903 CASKIN1Q8WXD9 1431 aa35.55■■■■□ 3.28
HLA-A-205ENST00000461903 FYCO1Q9BQS8 1478 aa35.54■■■■□ 3.28
HLA-A-205ENST00000461903 ATP1B4Q9UN42 357 aaPredicted RBP35.53■■■■□ 3.28
HLA-A-205ENST00000461903 NUP153P49790 1475 aaKnown RBP35.53■■■■□ 3.28
HLA-A-205ENST00000461903 KDM5BQ9UGL1 1544 aa35.51■■■■□ 3.27
HLA-A-205ENST00000461903 ZCCHC11Q5TAX3 1644 aaKnown RBP35.5■■■■□ 3.27
HLA-A-205ENST00000461903 ARID3CA6NKF2 412 aa35.46■■■■□ 3.27
HLA-A-205ENST00000461903 ATP10BO94823 1461 aa35.41■■■■□ 3.26
HLA-A-205ENST00000461903 EPRSP07814 1512 aaKnown RBP35.41■■■■□ 3.26
HLA-A-205ENST00000461903 CCDC18Q5T9S5 1454 aa35.4■■■■□ 3.26
HLA-A-205ENST00000461903 KDM6BO15054 1643 aa35.4■■■■□ 3.26
HLA-A-205ENST00000461903 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.39■■■■□ 3.26
HLA-A-205ENST00000461903 HNRNPUL2Q1KMD3 747 aaKnown RBP35.39■■■■□ 3.26
HLA-A-205ENST00000461903 LRRIQ1Q96JM4 1722 aa35.39■■■■□ 3.26
HLA-A-205ENST00000461903 CDK13Q14004 1512 aaKnown RBP35.38■■■■□ 3.25
HLA-A-205ENST00000461903 ASXL2Q76L83 1435 aa35.29■■■■□ 3.24
HLA-A-205ENST00000461903 TSPOAP1O95153 1857 aa35.29■■■■□ 3.24
HLA-A-205ENST00000461903 CFAP43Q8NDM7 1665 aa35.24■■■■□ 3.23
HLA-A-205ENST00000461903 WDR7Q9Y4E6 1490 aa35.24■■■■□ 3.23
HLA-A-205ENST00000461903 CDK11AQ9UQ88 783 aaPredicted RBP35.23■■■■□ 3.23
HLA-A-205ENST00000461903 TIAM1Q13009 1591 aa35.19■■■■□ 3.22
HLA-A-205ENST00000461903 PLEKHD1A6NEE1 506 aa35.19■■■■□ 3.22
HLA-A-205ENST00000461903 APLP2Q06481 763 aa35.19■■■■□ 3.22
HLA-A-205ENST00000461903 KDM4FA0A1W2PPD8 638 aa35.18■■■■□ 3.22
HLA-A-205ENST00000461903 GLI2P10070 1586 aa35.15■■■■□ 3.22
HLA-A-205ENST00000461903 MAP3K1Q13233 1512 aa35.14■■■■□ 3.22
HLA-A-205ENST00000461903 TROQ12816 1431 aaPredicted RBP35.1■■■■□ 3.21
HLA-A-205ENST00000461903 PPRC1Q5VV67 1664 aaKnown RBP35.09■■■■□ 3.21
HLA-A-205ENST00000461903 MAGI3Q5TCQ9 1506 aa35.08■■■■□ 3.21
HLA-A-205ENST00000461903 MTUS2Q5JR59 1369 aa35.07■■■■□ 3.21
HLA-A-205ENST00000461903 KCNH8Q96L42 1107 aa35.07■■■■□ 3.2
HLA-A-205ENST00000461903 EHBP1L1Q8N3D4 1523 aa35.07■■■■□ 3.2
HLA-A-205ENST00000461903 KIF14Q15058 1648 aa35.04■■■■□ 3.2
HLA-A-205ENST00000461903 LRRC9Q6ZRR7 1453 aa35■■■■□ 3.19
HLA-A-205ENST00000461903 ABCA9Q8IUA7 1624 aa34.94■■■■□ 3.18
HLA-A-205ENST00000461903 MAP3K4Q9Y6R4 1608 aa34.93■■■■□ 3.18
HLA-A-205ENST00000461903 SUPT6HQ7KZ85 1726 aaKnown RBP34.91■■■■□ 3.18
HLA-A-205ENST00000461903 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.91■■■■□ 3.18
HLA-A-205ENST00000461903 KANK4Q5T7N3 995 aaPredicted RBP34.9■■■■□ 3.18
HLA-A-205ENST00000461903 TTC37Q6PGP7 1564 aa34.9■■■■□ 3.18
HLA-A-205ENST00000461903 COL17A1Q9UMD9 1497 aaPredicted RBP34.86■■■■□ 3.17
HLA-A-205ENST00000461903 ADGRL1O94910 1474 aa34.85■■■■□ 3.17
HLA-A-205ENST00000461903 TEX14Q8IWB6 1497 aa34.85■■■■□ 3.17
HLA-A-205ENST00000461903 CD109Q6YHK3 1445 aa34.82■■■■□ 3.16
HLA-A-205ENST00000461903 MYO5CQ9NQX4 1742 aa34.8■■■■□ 3.16
HLA-A-205ENST00000461903 NCOA2Q15596 1464 aa34.8■■■■□ 3.16
HLA-A-205ENST00000461903 CCNB3Q8WWL7 1395 aa34.75■■■■□ 3.15
HLA-A-205ENST00000461903 ITSN2Q9NZM3 1697 aa34.73■■■■□ 3.15
HLA-A-205ENST00000461903 CDC42BPAQ5VT25 1732 aa34.72■■■■□ 3.15
HLA-A-205ENST00000461903 PREX2Q70Z35 1606 aa34.72■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms