RNA–Protein interactions for RNA: ENST00000461739.1

ARHGAP4-215, Transcript of Rho GTPase activating protein 4, human

TSL 3

Gene ARHGAP4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP4-215	ENST00000461739	SHROOM2	Q13796	1616 aa		34.83	■■■■□ 3.17
ARHGAP4-215	ENST00000461739	CSRNP3	Q8WYN3	585 aa		34.82	■■■■□ 3.16
ARHGAP4-215	ENST00000461739	KIAA0586	Q9BVV6	1533 aa		34.8	■■■■□ 3.16
ARHGAP4-215	ENST00000461739	JPH4	Q96JJ6	628 aa		34.68	■■■■□ 3.14
ARHGAP4-215	ENST00000461739	FAM9A	Q8IZU1	332 aa	Predicted RBP	34.67	■■■■□ 3.14
ARHGAP4-215	ENST00000461739	ARAP1	Q96P48	1450 aa		34.66	■■■■□ 3.14
ARHGAP4-215	ENST00000461739	IQGAP2	Q13576	1575 aa		34.65	■■■■□ 3.14
ARHGAP4-215	ENST00000461739	CTTNBP2	Q8WZ74	1663 aa		34.63	■■■■□ 3.13
ARHGAP4-215	ENST00000461739	ERCC6L2	Q5T890	1561 aa		34.63	■■■■□ 3.13
ARHGAP4-215	ENST00000461739	PRG4	Q92954	1404 aa	Predicted RBP	34.61	■■■■□ 3.13
ARHGAP4-215	ENST00000461739	KIF21B	O75037	1637 aa		34.59	■■■■□ 3.13
ARHGAP4-215	ENST00000461739	CYB5RL	Q6IPT4	315 aa		34.53	■■■■□ 3.12
ARHGAP4-215	ENST00000461739	UGGT2	Q9NYU1	1516 aa		34.47	■■■■□ 3.11
ARHGAP4-215	ENST00000461739	CARMIL2	Q6F5E8	1435 aa		34.41	■■■■□ 3.1
ARHGAP4-215	ENST00000461739	DISP1	Q96F81	1524 aa		34.37	■■■■□ 3.09
ARHGAP4-215	ENST00000461739	GOLGA3	Q08378	1498 aa		34.35	■■■■□ 3.09
ARHGAP4-215	ENST00000461739	KIAA0556	O60303	1618 aa		34.32	■■■■□ 3.08
ARHGAP4-215	ENST00000461739	TNIK	Q9UKE5	1360 aa		34.28	■■■■□ 3.08
ARHGAP4-215	ENST00000461739	PTPRG	P23470	1445 aa		34.22	■■■■□ 3.07
ARHGAP4-215	ENST00000461739	UBTF	P17480	764 aa	Known RBP	34.19	■■■■□ 3.06
ARHGAP4-215	ENST00000461739	SAMD9	Q5K651	1589 aa		34.17	■■■■□ 3.06
ARHGAP4-215	ENST00000461739	EHMT2	Q96KQ7	1210 aa		34.15	■■■■□ 3.06
ARHGAP4-215	ENST00000461739	ADCY10	Q96PN6	1610 aa		34.1	■■■■□ 3.05
ARHGAP4-215	ENST00000461739	TTBK1	Q5TCY1	1321 aa	Predicted RBP	34.06	■■■■□ 3.04
ARHGAP4-215	ENST00000461739	EFCAB5	A4FU69	1503 aa		34.06	■■■■□ 3.04
ARHGAP4-215	ENST00000461739	UACA	Q9BZF9	1416 aa		34.02	■■■■□ 3.04
ARHGAP4-215	ENST00000461739	UHRF1BP1L	A0JNW5	1464 aa		34.01	■■■■□ 3.04
ARHGAP4-215	ENST00000461739	RANGAP1	P46060	587 aa	Predicted RBP	33.99	■■■■□ 3.03
ARHGAP4-215	ENST00000461739	ABCC2	Q92887	1545 aa		33.98	■■■■□ 3.03
ARHGAP4-215	ENST00000461739	P3H3	Q8IVL6	736 aa		33.97	■■■■□ 3.03
ARHGAP4-215	ENST00000461739	ABCA8	O94911	1581 aa		33.93	■■■■□ 3.02
ARHGAP4-215	ENST00000461739	NPM1	P06748	294 aa	Known RBP eCLIP	33.92	■■■■□ 3.02
ARHGAP4-215	ENST00000461739	PLB1	Q6P1J6	1458 aa		33.9	■■■■□ 3.02
ARHGAP4-215	ENST00000461739	FHOD3	Q2V2M9	1422 aa		33.9	■■■■□ 3.02
ARHGAP4-215	ENST00000461739	ARHGAP35	Q9NRY4	1499 aa		33.88	■■■■□ 3.01
ARHGAP4-215	ENST00000461739	MAPKBP1	O60336	1514 aa		33.87	■■■■□ 3.01
ARHGAP4-215	ENST00000461739	KDM5B	Q9UGL1	1544 aa		33.84	■■■■□ 3.01
ARHGAP4-215	ENST00000461739	RAPGEF6	Q8TEU7	1601 aa		33.79	■■■■□ 3
ARHGAP4-215	ENST00000461739	ZCCHC11	Q5TAX3	1644 aa	Known RBP	33.79	■■■■□ 3
ARHGAP4-215	ENST00000461739	TRH	P20396	242 aa	Predicted RBP	33.75	■■■□□ 2.99
ARHGAP4-215	ENST00000461739	CLIP1	P30622	1438 aa		33.72	■■■□□ 2.99
ARHGAP4-215	ENST00000461739	FMN1	Q68DA7	1419 aa		33.71	■■■□□ 2.99
ARHGAP4-215	ENST00000461739	LOC105371045	A0A1W2PR82	267 aa		33.69	■■■□□ 2.98
ARHGAP4-215	ENST00000461739	KIF13A	Q9H1H9	1805 aa		33.67	■■■□□ 2.98
ARHGAP4-215	ENST00000461739	ASXL2	Q76L83	1435 aa		33.66	■■■□□ 2.98
ARHGAP4-215	ENST00000461739	ABCC10	Q5T3U5	1492 aa		33.65	■■■□□ 2.98
ARHGAP4-215	ENST00000461739	NUP153	P49790	1475 aa	Known RBP	33.63	■■■□□ 2.97
ARHGAP4-215	ENST00000461739	DIP2B	Q9P265	1576 aa		33.63	■■■□□ 2.97
ARHGAP4-215	ENST00000461739	CEP162	Q5TB80	1403 aa		33.62	■■■□□ 2.97
ARHGAP4-215	ENST00000461739	ATP10B	O94823	1461 aa		33.61	■■■□□ 2.97
ARHGAP4-215	ENST00000461739	HECW1	Q76N89	1606 aa		33.56	■■■□□ 2.96
ARHGAP4-215	ENST00000461739	WDR7	Q9Y4E6	1490 aa		33.55	■■■□□ 2.96
ARHGAP4-215	ENST00000461739	FAM69C	Q0P6D2	419 aa		33.52	■■■□□ 2.96
ARHGAP4-215	ENST00000461739	ARID3C	A6NKF2	412 aa		33.51	■■■□□ 2.95
ARHGAP4-215	ENST00000461739	GLI2	P10070	1586 aa		33.51	■■■□□ 2.95
ARHGAP4-215	ENST00000461739	EPRS	P07814	1512 aa	Known RBP	33.48	■■■□□ 2.95
ARHGAP4-215	ENST00000461739	PCF11	O94913	1555 aa	Known RBP	33.47	■■■□□ 2.95
ARHGAP4-215	ENST00000461739	CASKIN1	Q8WXD9	1431 aa		33.46	■■■□□ 2.95
ARHGAP4-215	ENST00000461739	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	33.43	■■■□□ 2.94
ARHGAP4-215	ENST00000461739	HNRNPUL2	Q1KMD3	747 aa	Known RBP	33.43	■■■□□ 2.94
ARHGAP4-215	ENST00000461739	FYCO1	Q9BQS8	1478 aa		33.41	■■■□□ 2.94
ARHGAP4-215	ENST00000461739	LRRIQ1	Q96JM4	1722 aa		33.4	■■■□□ 2.94
ARHGAP4-215	ENST00000461739	CDK13	Q14004	1512 aa	Known RBP	33.4	■■■□□ 2.94
ARHGAP4-215	ENST00000461739	ATP1B4	Q9UN42	357 aa	Predicted RBP	33.39	■■■□□ 2.94
ARHGAP4-215	ENST00000461739	MAP3K4	Q9Y6R4	1608 aa		33.36	■■■□□ 2.93
ARHGAP4-215	ENST00000461739	TSPOAP1	O95153	1857 aa		33.33	■■■□□ 2.93
ARHGAP4-215	ENST00000461739	CCDC18	Q5T9S5	1454 aa		33.33	■■■□□ 2.93
ARHGAP4-215	ENST00000461739	PLEKHD1	A6NEE1	506 aa		33.33	■■■□□ 2.93
ARHGAP4-215	ENST00000461739	KCNH8	Q96L42	1107 aa		33.32	■■■□□ 2.92
ARHGAP4-215	ENST00000461739	CFAP43	Q8NDM7	1665 aa		33.32	■■■□□ 2.92
ARHGAP4-215	ENST00000461739	PPRC1	Q5VV67	1664 aa	Known RBP	33.26	■■■□□ 2.92
ARHGAP4-215	ENST00000461739	CDK11A	Q9UQ88	783 aa	Predicted RBP	33.26	■■■□□ 2.91
ARHGAP4-215	ENST00000461739	ABCA9	Q8IUA7	1624 aa		33.26	■■■□□ 2.91
ARHGAP4-215	ENST00000461739	VPS8	Q8N3P4	1428 aa		33.22	■■■□□ 2.91
ARHGAP4-215	ENST00000461739	CD109	Q6YHK3	1445 aa		33.19	■■■□□ 2.9
ARHGAP4-215	ENST00000461739	TRO	Q12816	1431 aa	Predicted RBP	33.17	■■■□□ 2.9
ARHGAP4-215	ENST00000461739	TEX14	Q8IWB6	1497 aa		33.17	■■■□□ 2.9
ARHGAP4-215	ENST00000461739	MAGI3	Q5TCQ9	1506 aa		33.17	■■■□□ 2.9
ARHGAP4-215	ENST00000461739	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	33.13	■■■□□ 2.89
ARHGAP4-215	ENST00000461739	KIF14	Q15058	1648 aa		33.1	■■■□□ 2.89
ARHGAP4-215	ENST00000461739	TTC37	Q6PGP7	1564 aa		33.09	■■■□□ 2.89
ARHGAP4-215	ENST00000461739	KDM6B	O15054	1643 aa		33.03	■■■□□ 2.88
ARHGAP4-215	ENST00000461739	TIAM1	Q13009	1591 aa		33	■■■□□ 2.87
ARHGAP4-215	ENST00000461739	MYO5C	Q9NQX4	1742 aa		32.99	■■■□□ 2.87
ARHGAP4-215	ENST00000461739	MAP3K1	Q13233	1512 aa		32.97	■■■□□ 2.87
ARHGAP4-215	ENST00000461739	EHBP1L1	Q8N3D4	1523 aa		32.96	■■■□□ 2.87
ARHGAP4-215	ENST00000461739	MTUS2	Q5JR59	1369 aa		32.96	■■■□□ 2.87
ARHGAP4-215	ENST00000461739	NEO1	Q92859	1461 aa		32.94	■■■□□ 2.86
ARHGAP4-215	ENST00000461739	CFAP74	Q9C0B2	1584 aa		32.94	■■■□□ 2.86
ARHGAP4-215	ENST00000461739	PHLDB1	Q86UU1	1377 aa		32.94	■■■□□ 2.86
ARHGAP4-215	ENST00000461739	ARAP3	Q8WWN8	1544 aa		32.93	■■■□□ 2.86
ARHGAP4-215	ENST00000461739	PLCH2	O75038	1416 aa		32.93	■■■□□ 2.86
ARHGAP4-215	ENST00000461739	FANCA	O15360	1455 aa		32.88	■■■□□ 2.85
ARHGAP4-215	ENST00000461739	COL17A1	Q9UMD9	1497 aa	Predicted RBP	32.87	■■■□□ 2.85
ARHGAP4-215	ENST00000461739	PREX2	Q70Z35	1606 aa		32.85	■■■□□ 2.85
ARHGAP4-215	ENST00000461739	CDC42BPA	Q5VT25	1732 aa		32.85	■■■□□ 2.85
ARHGAP4-215	ENST00000461739	CDC42BPB	Q9Y5S2	1711 aa		32.84	■■■□□ 2.85
ARHGAP4-215	ENST00000461739	LRRC9	Q6ZRR7	1453 aa		32.83	■■■□□ 2.85
ARHGAP4-215	ENST00000461739	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.81	■■■□□ 2.84
ARHGAP4-215	ENST00000461739	AKNA	Q7Z591	1439 aa		32.81	■■■□□ 2.84

Retrieved 100 of 20,778 RNA–protein pairs in 1619.5 ms