RNA–Protein interactions for RNA: ENST00000461620.1

SLC48A1-203, Transcript of solute carrier family 48 member 1, humanhuman

TSL 4

Gene SLC48A1, Length 459 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-203ENST00000461620 KIF21BO75037 1637 aa26.03■■□□□ 1.76
SLC48A1-203ENST00000461620 ARHGEF11O15085 1522 aa26.01■■□□□ 1.75
SLC48A1-203ENST00000461620 SHROOM2Q13796 1616 aa25.99■■□□□ 1.75
SLC48A1-203ENST00000461620 IQGAP2Q13576 1575 aa25.96■■□□□ 1.75
SLC48A1-203ENST00000461620 GOLGA3Q08378 1498 aa25.94■■□□□ 1.74
SLC48A1-203ENST00000461620 PRG4Q92954 1404 aaPredicted RBP25.94■■□□□ 1.74
SLC48A1-203ENST00000461620 RIMBP3CA6NJZ7 1639 aa25.92■■□□□ 1.74
SLC48A1-203ENST00000461620 RIMBP3BA6NNM3 1639 aa25.92■■□□□ 1.74
SLC48A1-203ENST00000461620 RIMBP3Q9UFD9 1639 aa25.92■■□□□ 1.74
SLC48A1-203ENST00000461620 CARMIL2Q6F5E8 1435 aa25.91■■□□□ 1.74
SLC48A1-203ENST00000461620 UGGT2Q9NYU1 1516 aa25.88■■□□□ 1.73
SLC48A1-203ENST00000461620 CTTNBP2Q8WZ74 1663 aa25.87■■□□□ 1.73
SLC48A1-203ENST00000461620 UBTFP17480 764 aaKnown RBP25.87■■□□□ 1.73
SLC48A1-203ENST00000461620 ARAP1Q96P48 1450 aa25.8■■□□□ 1.72
SLC48A1-203ENST00000461620 CYB5RLQ6IPT4 315 aa25.8■■□□□ 1.72
SLC48A1-203ENST00000461620 TNIKQ9UKE5 1360 aa25.77■■□□□ 1.72
SLC48A1-203ENST00000461620 ERCC6L2Q5T890 1561 aa25.76■■□□□ 1.71
SLC48A1-203ENST00000461620 DISP1Q96F81 1524 aa25.74■■□□□ 1.71
SLC48A1-203ENST00000461620 PTPRGP23470 1445 aa25.72■■□□□ 1.71
SLC48A1-203ENST00000461620 EHMT2Q96KQ7 1210 aa25.7■■□□□ 1.7
SLC48A1-203ENST00000461620 KIAA0556O60303 1618 aa25.69■■□□□ 1.7
SLC48A1-203ENST00000461620 EFCAB5A4FU69 1503 aa25.64■■□□□ 1.7
SLC48A1-203ENST00000461620 SAMD9Q5K651 1589 aa25.61■■□□□ 1.69
SLC48A1-203ENST00000461620 RANGAP1P46060 587 aaPredicted RBP25.57■■□□□ 1.68
SLC48A1-203ENST00000461620 UACAQ9BZF9 1416 aa25.54■■□□□ 1.68
SLC48A1-203ENST00000461620 NPM1P06748 294 aaKnown RBP eCLIP25.54■■□□□ 1.68
SLC48A1-203ENST00000461620 P3H3Q8IVL6 736 aa25.54■■□□□ 1.68
SLC48A1-203ENST00000461620 UHRF1BP1LA0JNW5 1464 aa25.53■■□□□ 1.68
SLC48A1-203ENST00000461620 TTBK1Q5TCY1 1321 aaPredicted RBP25.52■■□□□ 1.68
SLC48A1-203ENST00000461620 LOC105371045A0A1W2PR82 267 aa25.5■■□□□ 1.67
SLC48A1-203ENST00000461620 ARHGAP35Q9NRY4 1499 aa25.48■■□□□ 1.67
SLC48A1-203ENST00000461620 CLIP1P30622 1438 aa25.47■■□□□ 1.67
SLC48A1-203ENST00000461620 FHOD3Q2V2M9 1422 aa25.46■■□□□ 1.67
SLC48A1-203ENST00000461620 FMN1Q68DA7 1419 aa25.46■■□□□ 1.67
SLC48A1-203ENST00000461620 ABCC2Q92887 1545 aa25.45■■□□□ 1.66
SLC48A1-203ENST00000461620 ADCY10Q96PN6 1610 aa25.41■■□□□ 1.66
SLC48A1-203ENST00000461620 ABCA8O94911 1581 aa25.41■■□□□ 1.66
SLC48A1-203ENST00000461620 PLB1Q6P1J6 1458 aa25.4■■□□□ 1.66
SLC48A1-203ENST00000461620 CEP162Q5TB80 1403 aa25.39■■□□□ 1.66
SLC48A1-203ENST00000461620 KDM5BQ9UGL1 1544 aa25.36■■□□□ 1.65
SLC48A1-203ENST00000461620 RAPGEF6Q8TEU7 1601 aa25.32■■□□□ 1.64
SLC48A1-203ENST00000461620 MAPKBP1O60336 1514 aa25.32■■□□□ 1.64
SLC48A1-203ENST00000461620 ATP10BO94823 1461 aa25.23■■□□□ 1.63
SLC48A1-203ENST00000461620 NUP153P49790 1475 aaKnown RBP25.23■■□□□ 1.63
SLC48A1-203ENST00000461620 CASKIN1Q8WXD9 1431 aa25.23■■□□□ 1.63
SLC48A1-203ENST00000461620 ASXL2Q76L83 1435 aa25.2■■□□□ 1.63
SLC48A1-203ENST00000461620 ZCCHC11Q5TAX3 1644 aaKnown RBP25.2■■□□□ 1.62
SLC48A1-203ENST00000461620 HECW1Q76N89 1606 aa25.2■■□□□ 1.62
SLC48A1-203ENST00000461620 TRHP20396 242 aaPredicted RBP25.2■■□□□ 1.62
SLC48A1-203ENST00000461620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.19■■□□□ 1.62
SLC48A1-203ENST00000461620 HNRNPUL2Q1KMD3 747 aaKnown RBP25.19■■□□□ 1.62
SLC48A1-203ENST00000461620 ATP1B4Q9UN42 357 aaPredicted RBP25.18■■□□□ 1.62
SLC48A1-203ENST00000461620 CDK11AQ9UQ88 783 aaPredicted RBP25.18■■□□□ 1.62
SLC48A1-203ENST00000461620 FYCO1Q9BQS8 1478 aa25.17■■□□□ 1.62
SLC48A1-203ENST00000461620 ABCC10Q5T3U5 1492 aa25.16■■□□□ 1.62
SLC48A1-203ENST00000461620 PLEKHD1A6NEE1 506 aa25.15■■□□□ 1.62
SLC48A1-203ENST00000461620 WDR7Q9Y4E6 1490 aa25.14■■□□□ 1.61
SLC48A1-203ENST00000461620 EPRSP07814 1512 aaKnown RBP25.13■■□□□ 1.61
SLC48A1-203ENST00000461620 CCDC18Q5T9S5 1454 aa25.13■■□□□ 1.61
SLC48A1-203ENST00000461620 VPS8Q8N3P4 1428 aa25.12■■□□□ 1.61
SLC48A1-203ENST00000461620 ARID3CA6NKF2 412 aa25.11■■□□□ 1.61
SLC48A1-203ENST00000461620 FAM69CQ0P6D2 419 aa25.11■■□□□ 1.61
SLC48A1-203ENST00000461620 PCF11O94913 1555 aaKnown RBP25.08■■□□□ 1.61
SLC48A1-203ENST00000461620 GLI2P10070 1586 aa25.05■■□□□ 1.6
SLC48A1-203ENST00000461620 DIP2BQ9P265 1576 aa25.04■■□□□ 1.6
SLC48A1-203ENST00000461620 KCNH8Q96L42 1107 aa25.02■■□□□ 1.6
SLC48A1-203ENST00000461620 CDK13Q14004 1512 aaKnown RBP25.02■■□□□ 1.6
SLC48A1-203ENST00000461620 TROQ12816 1431 aaPredicted RBP24.96■■□□□ 1.59
SLC48A1-203ENST00000461620 APLP2Q06481 763 aa24.94■■□□□ 1.58
SLC48A1-203ENST00000461620 KIF13AQ9H1H9 1805 aa24.93■■□□□ 1.58
SLC48A1-203ENST00000461620 MAP3K1Q13233 1512 aa24.92■■□□□ 1.58
SLC48A1-203ENST00000461620 CD109Q6YHK3 1445 aa24.9■■□□□ 1.58
SLC48A1-203ENST00000461620 MTUS2Q5JR59 1369 aa24.89■■□□□ 1.57
SLC48A1-203ENST00000461620 LRRIQ1Q96JM4 1722 aa24.88■■□□□ 1.57
SLC48A1-203ENST00000461620 ABCA9Q8IUA7 1624 aa24.87■■□□□ 1.57
SLC48A1-203ENST00000461620 TEX14Q8IWB6 1497 aa24.87■■□□□ 1.57
SLC48A1-203ENST00000461620 CFAP43Q8NDM7 1665 aa24.87■■□□□ 1.57
SLC48A1-203ENST00000461620 MAP3K4Q9Y6R4 1608 aa24.86■■□□□ 1.57
SLC48A1-203ENST00000461620 MAGI3Q5TCQ9 1506 aa24.86■■□□□ 1.57
SLC48A1-203ENST00000461620 KIF14Q15058 1648 aa24.83■■□□□ 1.57
SLC48A1-203ENST00000461620 PHLDB1Q86UU1 1377 aa24.82■■□□□ 1.56
SLC48A1-203ENST00000461620 TIAM1Q13009 1591 aa24.82■■□□□ 1.56
SLC48A1-203ENST00000461620 EHBP1L1Q8N3D4 1523 aa24.81■■□□□ 1.56
SLC48A1-203ENST00000461620 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.81■■□□□ 1.56
SLC48A1-203ENST00000461620 PLCH2O75038 1416 aa24.77■■□□□ 1.56
SLC48A1-203ENST00000461620 LRRC9Q6ZRR7 1453 aa24.76■■□□□ 1.55
SLC48A1-203ENST00000461620 ARAP3Q8WWN8 1544 aa24.75■■□□□ 1.55
SLC48A1-203ENST00000461620 NEO1Q92859 1461 aa24.73■■□□□ 1.55
SLC48A1-203ENST00000461620 EFCAB2Q5VUJ9 269 aa24.72■■□□□ 1.55
SLC48A1-203ENST00000461620 TTC37Q6PGP7 1564 aa24.71■■□□□ 1.55
SLC48A1-203ENST00000461620 TSPOAP1O95153 1857 aa24.7■■□□□ 1.54
SLC48A1-203ENST00000461620 CCNB3Q8WWL7 1395 aa24.69■■□□□ 1.54
SLC48A1-203ENST00000461620 PPRC1Q5VV67 1664 aaKnown RBP24.69■■□□□ 1.54
SLC48A1-203ENST00000461620 FANCAO15360 1455 aa24.67■■□□□ 1.54
SLC48A1-203ENST00000461620 KANK4Q5T7N3 995 aaPredicted RBP24.67■■□□□ 1.54
SLC48A1-203ENST00000461620 CFAP74Q9C0B2 1584 aa24.67■■□□□ 1.54
SLC48A1-203ENST00000461620 SUPT6HQ7KZ85 1726 aaKnown RBP24.65■■□□□ 1.54
SLC48A1-203ENST00000461620 MYO5CQ9NQX4 1742 aa24.64■■□□□ 1.54
SLC48A1-203ENST00000461620 NCOA2Q15596 1464 aa24.64■■□□□ 1.53
SLC48A1-203ENST00000461620 GPATCH8Q9UKJ3 1502 aaKnown RBP24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms