RNA–Protein interactions for RNA: ENST00000461219.5

SCAF8-204, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-204ENST00000461219 JPH4Q96JJ6 628 aa34.49■■■■□ 3.11
SCAF8-204ENST00000461219 PRG4Q92954 1404 aaPredicted RBP34.47■■■■□ 3.11
SCAF8-204ENST00000461219 KIAA0586Q9BVV6 1533 aa34.46■■■■□ 3.11
SCAF8-204ENST00000461219 RAPGEF2Q9Y4G8 1499 aa34.46■■■■□ 3.11
SCAF8-204ENST00000461219 IQGAP2Q13576 1575 aa34.34■■■■□ 3.09
SCAF8-204ENST00000461219 CTTNBP2Q8WZ74 1663 aa34.28■■■■□ 3.08
SCAF8-204ENST00000461219 EEA1Q15075 1411 aa34.24■■■■□ 3.07
SCAF8-204ENST00000461219 CHIC1Q5VXU3 224 aa34.23■■■■□ 3.07
SCAF8-204ENST00000461219 TRHP20396 242 aaPredicted RBP34.22■■■■□ 3.07
SCAF8-204ENST00000461219 CSRNP3Q8WYN3 585 aa34.21■■■■□ 3.07
SCAF8-204ENST00000461219 CARMIL2Q6F5E8 1435 aa34.21■■■■□ 3.07
SCAF8-204ENST00000461219 PRXQ9BXM0 1461 aa34.2■■■■□ 3.06
SCAF8-204ENST00000461219 FAM9AQ8IZU1 332 aaPredicted RBP34.17■■■■□ 3.06
SCAF8-204ENST00000461219 TTBK1Q5TCY1 1321 aaPredicted RBP34.12■■■■□ 3.05
SCAF8-204ENST00000461219 UGGT2Q9NYU1 1516 aa34.05■■■■□ 3.04
SCAF8-204ENST00000461219 PTPRGP23470 1445 aa34.04■■■■□ 3.04
SCAF8-204ENST00000461219 TNIKQ9UKE5 1360 aa34.03■■■■□ 3.04
SCAF8-204ENST00000461219 NPM1P06748 294 aaKnown RBP eCLIP34.03■■■■□ 3.04
SCAF8-204ENST00000461219 KIAA0556O60303 1618 aa33.99■■■■□ 3.03
SCAF8-204ENST00000461219 DISP1Q96F81 1524 aa33.99■■■■□ 3.03
SCAF8-204ENST00000461219 ADCY10Q96PN6 1610 aa33.97■■■■□ 3.03
SCAF8-204ENST00000461219 GOLGA3Q08378 1498 aa33.95■■■■□ 3.03
SCAF8-204ENST00000461219 KIF21BO75037 1637 aa33.92■■■■□ 3.02
SCAF8-204ENST00000461219 EHMT2Q96KQ7 1210 aa33.81■■■■□ 3
SCAF8-204ENST00000461219 UACAQ9BZF9 1416 aa33.79■■■■□ 3
SCAF8-204ENST00000461219 RANGAP1P46060 587 aaPredicted RBP33.77■■■■□ 3
SCAF8-204ENST00000461219 MAPKBP1O60336 1514 aa33.76■■■■□ 3
SCAF8-204ENST00000461219 KIF13AQ9H1H9 1805 aa33.74■■■□□ 2.99
SCAF8-204ENST00000461219 ABCC2Q92887 1545 aa33.74■■■□□ 2.99
SCAF8-204ENST00000461219 UHRF1BP1LA0JNW5 1464 aa33.72■■■□□ 2.99
SCAF8-204ENST00000461219 UBTFP17480 764 aaKnown RBP33.72■■■□□ 2.99
SCAF8-204ENST00000461219 P3H3Q8IVL6 736 aa33.72■■■□□ 2.99
SCAF8-204ENST00000461219 SAMD9Q5K651 1589 aa33.68■■■□□ 2.98
SCAF8-204ENST00000461219 PLB1Q6P1J6 1458 aa33.63■■■□□ 2.97
SCAF8-204ENST00000461219 FAM69CQ0P6D2 419 aa33.62■■■□□ 2.97
SCAF8-204ENST00000461219 ZCCHC11Q5TAX3 1644 aaKnown RBP33.61■■■□□ 2.97
SCAF8-204ENST00000461219 ABCC10Q5T3U5 1492 aa33.61■■■□□ 2.97
SCAF8-204ENST00000461219 DIP2BQ9P265 1576 aa33.6■■■□□ 2.97
SCAF8-204ENST00000461219 ABCA8O94911 1581 aa33.57■■■□□ 2.96
SCAF8-204ENST00000461219 KDM5BQ9UGL1 1544 aa33.56■■■□□ 2.96
SCAF8-204ENST00000461219 ASXL2Q76L83 1435 aa33.54■■■□□ 2.96
SCAF8-204ENST00000461219 EFCAB5A4FU69 1503 aa33.54■■■□□ 2.96
SCAF8-204ENST00000461219 TSPOAP1O95153 1857 aa33.53■■■□□ 2.96
SCAF8-204ENST00000461219 FHOD3Q2V2M9 1422 aa33.48■■■□□ 2.95
SCAF8-204ENST00000461219 RAPGEF6Q8TEU7 1601 aa33.47■■■□□ 2.95
SCAF8-204ENST00000461219 ARID3CA6NKF2 412 aa33.41■■■□□ 2.94
SCAF8-204ENST00000461219 WDR7Q9Y4E6 1490 aa33.36■■■□□ 2.93
SCAF8-204ENST00000461219 GLI2P10070 1586 aa33.35■■■□□ 2.93
SCAF8-204ENST00000461219 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.35■■■□□ 2.93
SCAF8-204ENST00000461219 HNRNPUL2Q1KMD3 747 aaKnown RBP33.35■■■□□ 2.93
SCAF8-204ENST00000461219 EPRSP07814 1512 aaKnown RBP33.33■■■□□ 2.93
SCAF8-204ENST00000461219 KCNH8Q96L42 1107 aa33.28■■■□□ 2.92
SCAF8-204ENST00000461219 ATP10BO94823 1461 aa33.28■■■□□ 2.92
SCAF8-204ENST00000461219 ARHGAP35Q9NRY4 1499 aa33.26■■■□□ 2.92
SCAF8-204ENST00000461219 FMN1Q68DA7 1419 aa33.24■■■□□ 2.91
SCAF8-204ENST00000461219 MAP3K4Q9Y6R4 1608 aa33.24■■■□□ 2.91
SCAF8-204ENST00000461219 NUP153P49790 1475 aaKnown RBP33.23■■■□□ 2.91
SCAF8-204ENST00000461219 ATP1B4Q9UN42 357 aaPredicted RBP33.22■■■□□ 2.91
SCAF8-204ENST00000461219 KDM6BO15054 1643 aa33.2■■■□□ 2.9
SCAF8-204ENST00000461219 CFAP43Q8NDM7 1665 aa33.19■■■□□ 2.9
SCAF8-204ENST00000461219 PPRC1Q5VV67 1664 aaKnown RBP33.18■■■□□ 2.9
SCAF8-204ENST00000461219 HECW1Q76N89 1606 aa33.16■■■□□ 2.9
SCAF8-204ENST00000461219 TEX14Q8IWB6 1497 aa33.15■■■□□ 2.9
SCAF8-204ENST00000461219 CLIP1P30622 1438 aa33.09■■■□□ 2.89
SCAF8-204ENST00000461219 CD109Q6YHK3 1445 aa33.09■■■□□ 2.89
SCAF8-204ENST00000461219 PLEKHD1A6NEE1 506 aa33.08■■■□□ 2.89
SCAF8-204ENST00000461219 CDK13Q14004 1512 aaKnown RBP33.03■■■□□ 2.88
SCAF8-204ENST00000461219 ABCA9Q8IUA7 1624 aa33.02■■■□□ 2.88
SCAF8-204ENST00000461219 MAGI3Q5TCQ9 1506 aa32.97■■■□□ 2.87
SCAF8-204ENST00000461219 PCF11O94913 1555 aaKnown RBP32.96■■■□□ 2.87
SCAF8-204ENST00000461219 CDK11AQ9UQ88 783 aaPredicted RBP32.96■■■□□ 2.87
SCAF8-204ENST00000461219 LRRIQ1Q96JM4 1722 aa32.93■■■□□ 2.86
SCAF8-204ENST00000461219 CASKIN1Q8WXD9 1431 aa32.9■■■□□ 2.86
SCAF8-204ENST00000461219 CEP162Q5TB80 1403 aa32.89■■■□□ 2.86
SCAF8-204ENST00000461219 LOC105371045A0A1W2PR82 267 aa32.87■■■□□ 2.85
SCAF8-204ENST00000461219 CCDC18Q5T9S5 1454 aa32.86■■■□□ 2.85
SCAF8-204ENST00000461219 FYCO1Q9BQS8 1478 aa32.86■■■□□ 2.85
SCAF8-204ENST00000461219 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.82■■■□□ 2.852e-9■■□□□ 13.9
SCAF8-204ENST00000461219 TTC37Q6PGP7 1564 aa32.8■■■□□ 2.84
SCAF8-204ENST00000461219 KIF14Q15058 1648 aa32.8■■■□□ 2.84
SCAF8-204ENST00000461219 COL17A1Q9UMD9 1497 aaPredicted RBP32.77■■■□□ 2.84
SCAF8-204ENST00000461219 CFAP74Q9C0B2 1584 aa32.77■■■□□ 2.84
SCAF8-204ENST00000461219 MYO5CQ9NQX4 1742 aa32.76■■■□□ 2.83
SCAF8-204ENST00000461219 PHLDB1Q86UU1 1377 aa32.75■■■□□ 2.83
SCAF8-204ENST00000461219 TROQ12816 1431 aaPredicted RBP32.75■■■□□ 2.83
SCAF8-204ENST00000461219 NEO1Q92859 1461 aa32.74■■■□□ 2.83
SCAF8-204ENST00000461219 ARAP3Q8WWN8 1544 aa32.69■■■□□ 2.82
SCAF8-204ENST00000461219 FANCAO15360 1455 aa32.68■■■□□ 2.82
SCAF8-204ENST00000461219 AEBP2Q6ZN18 517 aaPredicted RBP32.66■■■□□ 2.82
SCAF8-204ENST00000461219 AKNAQ7Z591 1439 aa32.6■■■□□ 2.81
SCAF8-204ENST00000461219 PLCH2O75038 1416 aa32.6■■■□□ 2.81
SCAF8-204ENST00000461219 ARHGAP5Q13017 1502 aa32.57■■■□□ 2.8
SCAF8-204ENST00000461219 RAPGEF3O95398 923 aa32.55■■■□□ 2.8
SCAF8-204ENST00000461219 DENND4BO75064 1496 aaPredicted RBP32.54■■■□□ 2.8
SCAF8-204ENST00000461219 EFCAB2Q5VUJ9 269 aa32.54■■■□□ 2.8
SCAF8-204ENST00000461219 MTUS2Q5JR59 1369 aa32.54■■■□□ 2.8
SCAF8-204ENST00000461219 ADGRL1O94910 1474 aa32.52■■■□□ 2.8
SCAF8-204ENST00000461219 RICTORQ6R327 1708 aa32.51■■■□□ 2.79
SCAF8-204ENST00000461219 CDC42BPBQ9Y5S2 1711 aa32.51■■■□□ 2.79
SCAF8-204ENST00000461219 PREX2Q70Z35 1606 aa32.5■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms