RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 JPH4Q96JJ6 628 aa27.15■■□□□ 1.94
SHANK1-205ENST00000461154 SHROOM2Q13796 1616 aa27.12■■□□□ 1.93
SHANK1-205ENST00000461154 RAPGEF2Q9Y4G8 1499 aa27.11■■□□□ 1.93
SHANK1-205ENST00000461154 KIAA0586Q9BVV6 1533 aa27.11■■□□□ 1.93
SHANK1-205ENST00000461154 PRG4Q92954 1404 aaPredicted RBP27.07■■□□□ 1.92
SHANK1-205ENST00000461154 CSRNP3Q8WYN3 585 aa27.05■■□□□ 1.92
SHANK1-205ENST00000461154 ERCC6L2Q5T890 1561 aa27.05■■□□□ 1.92
SHANK1-205ENST00000461154 PRXQ9BXM0 1461 aa27.02■■□□□ 1.92
SHANK1-205ENST00000461154 FAM9AQ8IZU1 332 aaPredicted RBP26.97■■□□□ 1.91
SHANK1-205ENST00000461154 IQGAP2Q13576 1575 aa26.89■■□□□ 1.9
SHANK1-205ENST00000461154 CTTNBP2Q8WZ74 1663 aa26.85■■□□□ 1.89
SHANK1-205ENST00000461154 KIF21BO75037 1637 aa26.85■■□□□ 1.89
SHANK1-205ENST00000461154 CARMIL2Q6F5E8 1435 aa26.84■■□□□ 1.89
SHANK1-205ENST00000461154 TRHP20396 242 aaPredicted RBP26.82■■□□□ 1.88
SHANK1-205ENST00000461154 PTPRGP23470 1445 aa26.75■■□□□ 1.87
SHANK1-205ENST00000461154 TNIKQ9UKE5 1360 aa26.75■■□□□ 1.87
SHANK1-205ENST00000461154 UGGT2Q9NYU1 1516 aa26.75■■□□□ 1.87
SHANK1-205ENST00000461154 NPM1P06748 294 aaKnown RBP eCLIP26.71■■□□□ 1.87
SHANK1-205ENST00000461154 DISP1Q96F81 1524 aa26.7■■□□□ 1.87
SHANK1-205ENST00000461154 GOLGA3Q08378 1498 aa26.69■■□□□ 1.86
SHANK1-205ENST00000461154 TTBK1Q5TCY1 1321 aaPredicted RBP26.68■■□□□ 1.86
SHANK1-205ENST00000461154 KIAA0556O60303 1618 aa26.61■■□□□ 1.85
SHANK1-205ENST00000461154 UBTFP17480 764 aaKnown RBP26.61■■□□□ 1.85
SHANK1-205ENST00000461154 ADCY10Q96PN6 1610 aa26.59■■□□□ 1.85
SHANK1-205ENST00000461154 EHMT2Q96KQ7 1210 aa26.58■■□□□ 1.85
SHANK1-205ENST00000461154 UACAQ9BZF9 1416 aa26.56■■□□□ 1.84
SHANK1-205ENST00000461154 UHRF1BP1LA0JNW5 1464 aa26.53■■□□□ 1.84
SHANK1-205ENST00000461154 SAMD9Q5K651 1589 aa26.5■■□□□ 1.83
SHANK1-205ENST00000461154 MAPKBP1O60336 1514 aa26.49■■□□□ 1.83
SHANK1-205ENST00000461154 ABCC2Q92887 1545 aa26.49■■□□□ 1.83
SHANK1-205ENST00000461154 EFCAB5A4FU69 1503 aa26.45■■□□□ 1.83
SHANK1-205ENST00000461154 RANGAP1P46060 587 aaPredicted RBP26.45■■□□□ 1.82
SHANK1-205ENST00000461154 P3H3Q8IVL6 736 aa26.45■■□□□ 1.82
SHANK1-205ENST00000461154 ABCC10Q5T3U5 1492 aa26.42■■□□□ 1.82
SHANK1-205ENST00000461154 FAM69CQ0P6D2 419 aa26.41■■□□□ 1.82
SHANK1-205ENST00000461154 PLB1Q6P1J6 1458 aa26.39■■□□□ 1.82
SHANK1-205ENST00000461154 KDM5BQ9UGL1 1544 aa26.39■■□□□ 1.81
SHANK1-205ENST00000461154 ABCA8O94911 1581 aa26.34■■□□□ 1.81
SHANK1-205ENST00000461154 ASXL2Q76L83 1435 aa26.34■■□□□ 1.81
SHANK1-205ENST00000461154 FHOD3Q2V2M9 1422 aa26.32■■□□□ 1.8
SHANK1-205ENST00000461154 KIF13AQ9H1H9 1805 aa26.32■■□□□ 1.8
SHANK1-205ENST00000461154 DIP2BQ9P265 1576 aa26.3■■□□□ 1.8
SHANK1-205ENST00000461154 ARHGAP35Q9NRY4 1499 aa26.29■■□□□ 1.8
SHANK1-205ENST00000461154 ZCCHC11Q5TAX3 1644 aaKnown RBP26.27■■□□□ 1.8
SHANK1-205ENST00000461154 RAPGEF6Q8TEU7 1601 aa26.22■■□□□ 1.79
SHANK1-205ENST00000461154 CLIP1P30622 1438 aa26.21■■□□□ 1.79
SHANK1-205ENST00000461154 FMN1Q68DA7 1419 aa26.2■■□□□ 1.78
SHANK1-205ENST00000461154 LOC105371045A0A1W2PR82 267 aa26.18■■□□□ 1.78
SHANK1-205ENST00000461154 GLI2P10070 1586 aa26.18■■□□□ 1.78
SHANK1-205ENST00000461154 WDR7Q9Y4E6 1490 aa26.17■■□□□ 1.78
SHANK1-205ENST00000461154 EPRSP07814 1512 aaKnown RBP26.17■■□□□ 1.78
SHANK1-205ENST00000461154 ATP10BO94823 1461 aa26.17■■□□□ 1.78
SHANK1-205ENST00000461154 ARID3CA6NKF2 412 aa26.16■■□□□ 1.78
SHANK1-205ENST00000461154 CEP162Q5TB80 1403 aa26.13■■□□□ 1.77
SHANK1-205ENST00000461154 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.12■■□□□ 1.77
SHANK1-205ENST00000461154 HNRNPUL2Q1KMD3 747 aaKnown RBP26.12■■□□□ 1.77
SHANK1-205ENST00000461154 KCNH8Q96L42 1107 aa26.12■■□□□ 1.77
SHANK1-205ENST00000461154 NUP153P49790 1475 aaKnown RBP26.1■■□□□ 1.77
SHANK1-205ENST00000461154 HECW1Q76N89 1606 aa26.06■■□□□ 1.76
SHANK1-205ENST00000461154 TSPOAP1O95153 1857 aa26.05■■□□□ 1.76
SHANK1-205ENST00000461154 PLEKHD1A6NEE1 506 aa26.01■■□□□ 1.75
SHANK1-205ENST00000461154 MAP3K4Q9Y6R4 1608 aa26.01■■□□□ 1.75
SHANK1-205ENST00000461154 ATP1B4Q9UN42 357 aaPredicted RBP26■■□□□ 1.75
SHANK1-205ENST00000461154 TEX14Q8IWB6 1497 aa25.98■■□□□ 1.75
SHANK1-205ENST00000461154 CD109Q6YHK3 1445 aa25.98■■□□□ 1.75
SHANK1-205ENST00000461154 CASKIN1Q8WXD9 1431 aa25.98■■□□□ 1.75
SHANK1-205ENST00000461154 PCF11O94913 1555 aaKnown RBP25.97■■□□□ 1.75
SHANK1-205ENST00000461154 FYCO1Q9BQS8 1478 aa25.95■■□□□ 1.74
SHANK1-205ENST00000461154 PPRC1Q5VV67 1664 aaKnown RBP25.95■■□□□ 1.74
SHANK1-205ENST00000461154 KDM6BO15054 1643 aa25.94■■□□□ 1.74
SHANK1-205ENST00000461154 CFAP43Q8NDM7 1665 aa25.93■■□□□ 1.74
SHANK1-205ENST00000461154 CDK13Q14004 1512 aaKnown RBP25.92■■□□□ 1.74
SHANK1-205ENST00000461154 MAGI3Q5TCQ9 1506 aa25.92■■□□□ 1.74
SHANK1-205ENST00000461154 CDK11AQ9UQ88 783 aaPredicted RBP25.9■■□□□ 1.74
SHANK1-205ENST00000461154 CCDC18Q5T9S5 1454 aa25.9■■□□□ 1.74
SHANK1-205ENST00000461154 LRRIQ1Q96JM4 1722 aa25.86■■□□□ 1.73
SHANK1-205ENST00000461154 ABCA9Q8IUA7 1624 aa25.85■■□□□ 1.73
SHANK1-205ENST00000461154 VPS8Q8N3P4 1428 aa25.81■■□□□ 1.72
SHANK1-205ENST00000461154 COL17A1Q9UMD9 1497 aaPredicted RBP25.79■■□□□ 1.72
SHANK1-205ENST00000461154 PHLDB1Q86UU1 1377 aa25.79■■□□□ 1.72
SHANK1-205ENST00000461154 TROQ12816 1431 aaPredicted RBP25.75■■□□□ 1.71
SHANK1-205ENST00000461154 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.73■■□□□ 1.71
SHANK1-205ENST00000461154 NEO1Q92859 1461 aa25.72■■□□□ 1.71
SHANK1-205ENST00000461154 KIF14Q15058 1648 aa25.71■■□□□ 1.71
SHANK1-205ENST00000461154 AEBP2Q6ZN18 517 aaPredicted RBP25.71■■□□□ 1.71
SHANK1-205ENST00000461154 ARAP3Q8WWN8 1544 aa25.7■■□□□ 1.7
SHANK1-205ENST00000461154 TTC37Q6PGP7 1564 aa25.65■■□□□ 1.7
SHANK1-205ENST00000461154 PLCH2O75038 1416 aa25.64■■□□□ 1.7
SHANK1-205ENST00000461154 MTUS2Q5JR59 1369 aa25.63■■□□□ 1.69
SHANK1-205ENST00000461154 FANCAO15360 1455 aa25.63■■□□□ 1.69
SHANK1-205ENST00000461154 TIAM1Q13009 1591 aa25.61■■□□□ 1.69
SHANK1-205ENST00000461154 AKNAQ7Z591 1439 aa25.61■■□□□ 1.69
SHANK1-205ENST00000461154 EHBP1L1Q8N3D4 1523 aa25.6■■□□□ 1.69
SHANK1-205ENST00000461154 EFCAB2Q5VUJ9 269 aa25.59■■□□□ 1.69
SHANK1-205ENST00000461154 MAP3K1Q13233 1512 aa25.58■■□□□ 1.69
SHANK1-205ENST00000461154 MYO5CQ9NQX4 1742 aa25.58■■□□□ 1.69
SHANK1-205ENST00000461154 CFAP74Q9C0B2 1584 aa25.58■■□□□ 1.69
SHANK1-205ENST00000461154 RAPGEF3O95398 923 aa25.58■■□□□ 1.69
SHANK1-205ENST00000461154 APLP2Q06481 763 aa25.56■■□□□ 1.68
SHANK1-205ENST00000461154 DENND4BO75064 1496 aaPredicted RBP25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms