RNA–Protein interactions for RNA: ENST00000460790.1

CSDC2-202, Transcript of cold shock domain containing C2, humanhuman

TSL 3

Gene CSDC2, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-202ENST00000460790 CHD1O14646 1710 aa17.45■□□□□ 0.38
CSDC2-202ENST00000460790 CLIP1P30622 1438 aa17.41■□□□□ 0.38
CSDC2-202ENST00000460790 NUP160Q12769 1436 aa17.41■□□□□ 0.38
CSDC2-202ENST00000460790 KIAA0586Q9BVV6 1533 aa17.4■□□□□ 0.38
CSDC2-202ENST00000460790 CEP170Q5SW79 1584 aa17.4■□□□□ 0.38
CSDC2-202ENST00000460790 RANGAP1P46060 587 aaPredicted RBP17.39■□□□□ 0.37
CSDC2-202ENST00000460790 IQGAP2Q13576 1575 aa17.37■□□□□ 0.37
CSDC2-202ENST00000460790 ARHGAP35Q9NRY4 1499 aa17.33■□□□□ 0.37
CSDC2-202ENST00000460790 UGGT2Q9NYU1 1516 aa17.3■□□□□ 0.36
CSDC2-202ENST00000460790 JPH4Q96JJ6 628 aa17.29■□□□□ 0.36
CSDC2-202ENST00000460790 EFCAB5A4FU69 1503 aa17.29■□□□□ 0.36
CSDC2-202ENST00000460790 SAMD9Q5K651 1589 aa17.28■□□□□ 0.36
CSDC2-202ENST00000460790 ARAP1Q96P48 1450 aa17.26■□□□□ 0.35
CSDC2-202ENST00000460790 OSCARQ8IYS5 282 aa17.26■□□□□ 0.35
CSDC2-202ENST00000460790 P3H3Q8IVL6 736 aa17.25■□□□□ 0.35
CSDC2-202ENST00000460790 CLASP1Q7Z460 1538 aa17.24■□□□□ 0.35
CSDC2-202ENST00000460790 DISP1Q96F81 1524 aa17.22■□□□□ 0.35
CSDC2-202ENST00000460790 VPS8Q8N3P4 1428 aa17.21■□□□□ 0.35
CSDC2-202ENST00000460790 SHROOM2Q13796 1616 aa17.21■□□□□ 0.35
CSDC2-202ENST00000460790 FHOD3Q2V2M9 1422 aa17.21■□□□□ 0.34
CSDC2-202ENST00000460790 KIAA0556O60303 1618 aa17.19■□□□□ 0.34
CSDC2-202ENST00000460790 CARMIL2Q6F5E8 1435 aa17.18■□□□□ 0.34
CSDC2-202ENST00000460790 PRG4Q92954 1404 aaPredicted RBP17.17■□□□□ 0.34
CSDC2-202ENST00000460790 FMN1Q68DA7 1419 aa17.14■□□□□ 0.33
CSDC2-202ENST00000460790 ERCC6L2Q5T890 1561 aa17.08■□□□□ 0.32
CSDC2-202ENST00000460790 CASKIN1Q8WXD9 1431 aa17.08■□□□□ 0.32
CSDC2-202ENST00000460790 PTPRGP23470 1445 aa17.05■□□□□ 0.32
CSDC2-202ENST00000460790 TTBK1Q5TCY1 1321 aaPredicted RBP17.05■□□□□ 0.32
CSDC2-202ENST00000460790 APLP2Q06481 763 aa17.05■□□□□ 0.32
CSDC2-202ENST00000460790 PCF11O94913 1555 aaKnown RBP17.05■□□□□ 0.32
CSDC2-202ENST00000460790 FYCO1Q9BQS8 1478 aa17.05■□□□□ 0.32
CSDC2-202ENST00000460790 ATP1B4Q9UN42 357 aaPredicted RBP17.02■□□□□ 0.32
CSDC2-202ENST00000460790 MAP3K1Q13233 1512 aa17■□□□□ 0.31
CSDC2-202ENST00000460790 RAPGEF6Q8TEU7 1601 aa16.99■□□□□ 0.31
CSDC2-202ENST00000460790 PLB1Q6P1J6 1458 aa16.99■□□□□ 0.31
CSDC2-202ENST00000460790 LRRIQ1Q96JM4 1722 aa16.99■□□□□ 0.31
CSDC2-202ENST00000460790 HECW1Q76N89 1606 aa16.98■□□□□ 0.31
CSDC2-202ENST00000460790 ABCA8O94911 1581 aa16.98■□□□□ 0.31
CSDC2-202ENST00000460790 PPARGC1BQ86YN6 1023 aaKnown RBP16.97■□□□□ 0.31
CSDC2-202ENST00000460790 TIAM1Q13009 1591 aa16.96■□□□□ 0.31
CSDC2-202ENST00000460790 UACAQ9BZF9 1416 aa16.95■□□□□ 0.3
CSDC2-202ENST00000460790 NUP153P49790 1475 aaKnown RBP16.94■□□□□ 0.3
CSDC2-202ENST00000460790 KANK4Q5T7N3 995 aaPredicted RBP16.94■□□□□ 0.3
CSDC2-202ENST00000460790 CFAP43Q8NDM7 1665 aa16.94■□□□□ 0.3
CSDC2-202ENST00000460790 CCDC18Q5T9S5 1454 aa16.93■□□□□ 0.3
CSDC2-202ENST00000460790 EPRSP07814 1512 aaKnown RBP16.93■□□□□ 0.3
CSDC2-202ENST00000460790 ARHGEF11O15085 1522 aa16.91■□□□□ 0.3
CSDC2-202ENST00000460790 UHRF1BP1LA0JNW5 1464 aa16.89■□□□□ 0.29
CSDC2-202ENST00000460790 LRRC9Q6ZRR7 1453 aa16.89■□□□□ 0.29
CSDC2-202ENST00000460790 CDK13Q14004 1512 aaKnown RBP16.88■□□□□ 0.29
CSDC2-202ENST00000460790 ABCC2Q92887 1545 aa16.88■□□□□ 0.29
CSDC2-202ENST00000460790 ARID3CA6NKF2 412 aa16.88■□□□□ 0.29
CSDC2-202ENST00000460790 ATP10BO94823 1461 aa16.87■□□□□ 0.29
CSDC2-202ENST00000460790 RIMBP3CA6NJZ7 1639 aa16.87■□□□□ 0.29
CSDC2-202ENST00000460790 RIMBP3BA6NNM3 1639 aa16.87■□□□□ 0.29
CSDC2-202ENST00000460790 RIMBP3Q9UFD9 1639 aa16.87■□□□□ 0.29
CSDC2-202ENST00000460790 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.84■□□□□ 0.29
CSDC2-202ENST00000460790 HNRNPUL2Q1KMD3 747 aaKnown RBP16.84■□□□□ 0.29
CSDC2-202ENST00000460790 CDK11AQ9UQ88 783 aaPredicted RBP16.84■□□□□ 0.29
CSDC2-202ENST00000460790 MTUS2Q5JR59 1369 aa16.83■□□□□ 0.28
CSDC2-202ENST00000460790 ADCY10Q96PN6 1610 aa16.82■□□□□ 0.28
CSDC2-202ENST00000460790 MAGI3Q5TCQ9 1506 aa16.81■□□□□ 0.28
CSDC2-202ENST00000460790 KDM5BQ9UGL1 1544 aa16.81■□□□□ 0.28
CSDC2-202ENST00000460790 PLEKHD1A6NEE1 506 aa16.8■□□□□ 0.28
CSDC2-202ENST00000460790 TRIM26Q12899 539 aaPredicted RBP16.8■□□□□ 0.28
CSDC2-202ENST00000460790 EHBP1L1Q8N3D4 1523 aa16.8■□□□□ 0.28
CSDC2-202ENST00000460790 CYB5RLQ6IPT4 315 aa16.78■□□□□ 0.28
CSDC2-202ENST00000460790 ZCCHC11Q5TAX3 1644 aaKnown RBP16.78■□□□□ 0.28
CSDC2-202ENST00000460790 TROQ12816 1431 aaPredicted RBP16.77■□□□□ 0.27
CSDC2-202ENST00000460790 SUPT6HQ7KZ85 1726 aaKnown RBP16.76■□□□□ 0.27
CSDC2-202ENST00000460790 NPM1P06748 294 aaKnown RBP eCLIP16.73■□□□□ 0.27
CSDC2-202ENST00000460790 NCOA2Q15596 1464 aa16.73■□□□□ 0.27
CSDC2-202ENST00000460790 PHLDB1Q86UU1 1377 aa16.71■□□□□ 0.27
CSDC2-202ENST00000460790 PCGF6Q9BYE7 350 aa16.68■□□□□ 0.26
CSDC2-202ENST00000460790 RRBP1Q9P2E9 1410 aaKnown RBP16.67■□□□□ 0.26
CSDC2-202ENST00000460790 KIF14Q15058 1648 aa16.67■□□□□ 0.26
CSDC2-202ENST00000460790 MYOM3Q5VTT5 1437 aa16.65■□□□□ 0.26
CSDC2-202ENST00000460790 DNAJC5Q9H3Z4 198 aa16.65■□□□□ 0.26
CSDC2-202ENST00000460790 ASXL2Q76L83 1435 aa16.64■□□□□ 0.25
CSDC2-202ENST00000460790 KCNH8Q96L42 1107 aa16.64■□□□□ 0.25
CSDC2-202ENST00000460790 ABCC10Q5T3U5 1492 aa16.64■□□□□ 0.25
CSDC2-202ENST00000460790 WDR7Q9Y4E6 1490 aa16.64■□□□□ 0.25
CSDC2-202ENST00000460790 CCNB3Q8WWL7 1395 aa16.63■□□□□ 0.25
CSDC2-202ENST00000460790 FGD6Q6ZV73 1430 aa16.62■□□□□ 0.25
CSDC2-202ENST00000460790 GPATCH8Q9UKJ3 1502 aaKnown RBP16.6■□□□□ 0.25
CSDC2-202ENST00000460790 MIA2Q96PC5 1412 aa16.6■□□□□ 0.25
CSDC2-202ENST00000460790 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.6■□□□□ 0.25
CSDC2-202ENST00000460790 CDC42BPAQ5VT25 1732 aa16.59■□□□□ 0.25
CSDC2-202ENST00000460790 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.59■□□□□ 0.25
CSDC2-202ENST00000460790 MAPKBP1O60336 1514 aa16.59■□□□□ 0.25
CSDC2-202ENST00000460790 ITSN2Q9NZM3 1697 aa16.58■□□□□ 0.24
CSDC2-202ENST00000460790 TTC37Q6PGP7 1564 aa16.56■□□□□ 0.24
CSDC2-202ENST00000460790 CFDP1Q9UEE9 299 aaPredicted RBP16.56■□□□□ 0.24
CSDC2-202ENST00000460790 PTPN23Q9H3S7 1636 aa16.56■□□□□ 0.24
CSDC2-202ENST00000460790 FAM50AQ14320 339 aaKnown RBP16.55■□□□□ 0.24
CSDC2-202ENST00000460790 CDC42BPBQ9Y5S2 1711 aa16.55■□□□□ 0.24
CSDC2-202ENST00000460790 TCOF1Q13428 1488 aaKnown RBP16.54■□□□□ 0.24
CSDC2-202ENST00000460790 MYO5CQ9NQX4 1742 aa16.53■□□□□ 0.24
CSDC2-202ENST00000460790 ABCA9Q8IUA7 1624 aa16.53■□□□□ 0.24
CSDC2-202ENST00000460790 PREX2Q70Z35 1606 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms