RNA–Protein interactions for RNA: ENST00000460715.2

TROVE2-209, Transcript of TROVE domain family member 2, humanhuman

TSL 3

Gene TROVE2, Length 1,474 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROVE2-209ENST00000460715 SNAPC4Q5SXM2 1469 aa23.91■■□□□ 1.42
TROVE2-209ENST00000460715 VPS8Q8N3P4 1428 aa23.84■■□□□ 1.41
TROVE2-209ENST00000460715 ARAP1Q96P48 1450 aa23.82■■□□□ 1.4
TROVE2-209ENST00000460715 ARHGAP35Q9NRY4 1499 aa23.82■■□□□ 1.4
TROVE2-209ENST00000460715 SYNJ2O15056 1496 aa23.8■■□□□ 1.4
TROVE2-209ENST00000460715 RANGAP1P46060 587 aaPredicted RBP23.8■■□□□ 1.4
TROVE2-209ENST00000460715 EFCAB5A4FU69 1503 aa23.79■■□□□ 1.4
TROVE2-209ENST00000460715 GRIN2AQ12879 1464 aa23.78■■□□□ 1.4
TROVE2-209ENST00000460715 IQGAP2Q13576 1575 aa23.71■■□□□ 1.39
TROVE2-209ENST00000460715 SAMD9Q5K651 1589 aa23.69■■□□□ 1.38
TROVE2-209ENST00000460715 CHMP7Q8WUX9 453 aaPredicted RBP23.67■■□□□ 1.38
TROVE2-209ENST00000460715 KIAA0586Q9BVV6 1533 aa23.66■■□□□ 1.38
TROVE2-209ENST00000460715 NUP160Q12769 1436 aa23.63■■□□□ 1.37
TROVE2-209ENST00000460715 CEP170Q5SW79 1584 aa23.62■■□□□ 1.37
TROVE2-209ENST00000460715 UGGT2Q9NYU1 1516 aa23.61■■□□□ 1.37
TROVE2-209ENST00000460715 FHOD3Q2V2M9 1422 aa23.58■■□□□ 1.37
TROVE2-209ENST00000460715 CHD1O14646 1710 aa23.56■■□□□ 1.36
TROVE2-209ENST00000460715 FBLN2P98095 1184 aa23.56■■□□□ 1.36
TROVE2-209ENST00000460715 TRIM26Q12899 539 aaPredicted RBP23.56■■□□□ 1.36
TROVE2-209ENST00000460715 APLP2Q06481 763 aa23.55■■□□□ 1.36
TROVE2-209ENST00000460715 FMN1Q68DA7 1419 aa23.54■■□□□ 1.36
TROVE2-209ENST00000460715 FOXD1Q16676 465 aa23.54■■□□□ 1.36
TROVE2-209ENST00000460715 PCF11O94913 1555 aaKnown RBP23.51■■□□□ 1.35
TROVE2-209ENST00000460715 P3H3Q8IVL6 736 aa23.5■■□□□ 1.35
TROVE2-209ENST00000460715 FYCO1Q9BQS8 1478 aa23.5■■□□□ 1.35
TROVE2-209ENST00000460715 MAP3K1Q13233 1512 aa23.48■■□□□ 1.35
TROVE2-209ENST00000460715 PPARGC1BQ86YN6 1023 aaKnown RBP23.48■■□□□ 1.35
TROVE2-209ENST00000460715 KIAA0556O60303 1618 aa23.47■■□□□ 1.35
TROVE2-209ENST00000460715 CASKIN1Q8WXD9 1431 aa23.47■■□□□ 1.35
TROVE2-209ENST00000460715 PCGF6Q9BYE7 350 aa23.45■■□□□ 1.34
TROVE2-209ENST00000460715 DISP1Q96F81 1524 aa23.44■■□□□ 1.34
TROVE2-209ENST00000460715 TIAM1Q13009 1591 aa23.42■■□□□ 1.34
TROVE2-209ENST00000460715 CFAP43Q8NDM7 1665 aa23.42■■□□□ 1.34
TROVE2-209ENST00000460715 CARMIL2Q6F5E8 1435 aa23.37■■□□□ 1.33
TROVE2-209ENST00000460715 JPH4Q96JJ6 628 aa23.36■■□□□ 1.33
TROVE2-209ENST00000460715 SHROOM2Q13796 1616 aa23.33■■□□□ 1.33
TROVE2-209ENST00000460715 HECW1Q76N89 1606 aa23.33■■□□□ 1.33
TROVE2-209ENST00000460715 TTBK1Q5TCY1 1321 aaPredicted RBP23.32■■□□□ 1.32
TROVE2-209ENST00000460715 CLASP1Q7Z460 1538 aa23.31■■□□□ 1.32
TROVE2-209ENST00000460715 LRRC9Q6ZRR7 1453 aa23.28■■□□□ 1.32
TROVE2-209ENST00000460715 KANK4Q5T7N3 995 aaPredicted RBP23.28■■□□□ 1.32
TROVE2-209ENST00000460715 CCDC18Q5T9S5 1454 aa23.28■■□□□ 1.32
TROVE2-209ENST00000460715 LRRIQ1Q96JM4 1722 aa23.26■■□□□ 1.31
TROVE2-209ENST00000460715 ATP1B4Q9UN42 357 aaPredicted RBP23.25■■□□□ 1.31
TROVE2-209ENST00000460715 PRG4Q92954 1404 aaPredicted RBP23.25■■□□□ 1.31
TROVE2-209ENST00000460715 RAPGEF6Q8TEU7 1601 aa23.24■■□□□ 1.31
TROVE2-209ENST00000460715 EPRSP07814 1512 aaKnown RBP23.18■■□□□ 1.3
TROVE2-209ENST00000460715 EHBP1L1Q8N3D4 1523 aa23.16■■□□□ 1.3
TROVE2-209ENST00000460715 NUP153P49790 1475 aaKnown RBP23.15■■□□□ 1.3
TROVE2-209ENST00000460715 ABCA8O94911 1581 aa23.14■■□□□ 1.3
TROVE2-209ENST00000460715 MTUS2Q5JR59 1369 aa23.12■■□□□ 1.29
TROVE2-209ENST00000460715 PLB1Q6P1J6 1458 aa23.12■■□□□ 1.29
TROVE2-209ENST00000460715 CDK13Q14004 1512 aaKnown RBP23.1■■□□□ 1.29
TROVE2-209ENST00000460715 PTPRGP23470 1445 aa23.1■■□□□ 1.29
TROVE2-209ENST00000460715 RRBP1Q9P2E9 1410 aaKnown RBP23.1■■□□□ 1.29
TROVE2-209ENST00000460715 SUPT6HQ7KZ85 1726 aaKnown RBP23.08■■□□□ 1.28
TROVE2-209ENST00000460715 ERCC6L2Q5T890 1561 aa23.07■■□□□ 1.28
TROVE2-209ENST00000460715 MAGI3Q5TCQ9 1506 aa23.06■■□□□ 1.28
TROVE2-209ENST00000460715 PHLDB1Q86UU1 1377 aa23.03■■□□□ 1.28
TROVE2-209ENST00000460715 CCNB3Q8WWL7 1395 aa23.02■■□□□ 1.28
TROVE2-209ENST00000460715 OSCARQ8IYS5 282 aa23.02■■□□□ 1.28
TROVE2-209ENST00000460715 NCOA2Q15596 1464 aa23.01■■□□□ 1.27
TROVE2-209ENST00000460715 ARHGEF11O15085 1522 aa23■■□□□ 1.27
TROVE2-209ENST00000460715 UACAQ9BZF9 1416 aa22.99■■□□□ 1.27
TROVE2-209ENST00000460715 CDK11AQ9UQ88 783 aaPredicted RBP22.98■■□□□ 1.27
TROVE2-209ENST00000460715 ABCC2Q92887 1545 aa22.96■■□□□ 1.27
TROVE2-209ENST00000460715 ARID3CA6NKF2 412 aa22.95■■□□□ 1.26
TROVE2-209ENST00000460715 TROQ12816 1431 aaPredicted RBP22.94■■□□□ 1.26
TROVE2-209ENST00000460715 MYOM3Q5VTT5 1437 aa22.93■■□□□ 1.26
TROVE2-209ENST00000460715 ATP10BO94823 1461 aa22.93■■□□□ 1.26
TROVE2-209ENST00000460715 ADCY10Q96PN6 1610 aa22.92■■□□□ 1.26
TROVE2-209ENST00000460715 UHRF1BP1LA0JNW5 1464 aa22.92■■□□□ 1.26
TROVE2-209ENST00000460715 FGD6Q6ZV73 1430 aa22.92■■□□□ 1.26
TROVE2-209ENST00000460715 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.91■■□□□ 1.264e-6■■■■□ 20.8
TROVE2-209ENST00000460715 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.91■■□□□ 1.26
TROVE2-209ENST00000460715 HNRNPUL2Q1KMD3 747 aaKnown RBP22.91■■□□□ 1.26
TROVE2-209ENST00000460715 KIF14Q15058 1648 aa22.83■■□□□ 1.25
TROVE2-209ENST00000460715 MIA2Q96PC5 1412 aa22.82■■□□□ 1.24
TROVE2-209ENST00000460715 PTPN23Q9H3S7 1636 aa22.82■■□□□ 1.24
TROVE2-209ENST00000460715 PLEKHD1A6NEE1 506 aa22.81■■□□□ 1.24
TROVE2-209ENST00000460715 KDM5BQ9UGL1 1544 aa22.8■■□□□ 1.24
TROVE2-209ENST00000460715 TCOF1Q13428 1488 aaKnown RBP22.8■■□□□ 1.24
TROVE2-209ENST00000460715 FAM50AQ14320 339 aaKnown RBP22.79■■□□□ 1.24
TROVE2-209ENST00000460715 ITSN2Q9NZM3 1697 aa22.79■■□□□ 1.24
TROVE2-209ENST00000460715 ZCCHC11Q5TAX3 1644 aaKnown RBP22.79■■□□□ 1.24
TROVE2-209ENST00000460715 HRCP23327 699 aa22.78■■□□□ 1.24
TROVE2-209ENST00000460715 ABCC10Q5T3U5 1492 aa22.74■■□□□ 1.23
TROVE2-209ENST00000460715 GPATCH8Q9UKJ3 1502 aaKnown RBP22.7■■□□□ 1.22
TROVE2-209ENST00000460715 ITGAEP38570 1179 aa22.68■■□□□ 1.22
TROVE2-209ENST00000460715 CDC42BPAQ5VT25 1732 aa22.68■■□□□ 1.22
TROVE2-209ENST00000460715 ZEB1P37275 1124 aaPredicted RBP22.63■■□□□ 1.21
TROVE2-209ENST00000460715 PREX2Q70Z35 1606 aa22.62■■□□□ 1.21
TROVE2-209ENST00000460715 CAMSAP2Q08AD1 1489 aa22.62■■□□□ 1.21
TROVE2-209ENST00000460715 CCER1Q8TC90 406 aaPredicted RBP22.61■■□□□ 1.21
TROVE2-209ENST00000460715 CFDP1Q9UEE9 299 aaPredicted RBP22.61■■□□□ 1.21
TROVE2-209ENST00000460715 TTC37Q6PGP7 1564 aa22.61■■□□□ 1.21
TROVE2-209ENST00000460715 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.61■■□□□ 1.213e-11■■□□□ 14.3
TROVE2-209ENST00000460715 DNMT1P26358 1616 aaKnown RBP22.61■■□□□ 1.21
TROVE2-209ENST00000460715 SETD5Q9C0A6 1442 aa22.59■■□□□ 1.21
TROVE2-209ENST00000460715 WDR7Q9Y4E6 1490 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 327.8 ms