RNA–Protein interactions for RNA: ENST00000460625.1

UPK1B-202, Transcript of uroplakin 1B, humanhuman

TSL 1 (best) BASIC

Gene UPK1B, Length 1,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1B-202ENST00000460625 ARHGAP35Q9NRY4 1499 aa17.26■□□□□ 0.35
UPK1B-202ENST00000460625 ARAP1Q96P48 1450 aa17.24■□□□□ 0.35
UPK1B-202ENST00000460625 CHMP7Q8WUX9 453 aaPredicted RBP17.24■□□□□ 0.35
UPK1B-202ENST00000460625 FBLN2P98095 1184 aa17.23■□□□□ 0.35
UPK1B-202ENST00000460625 CEP170Q5SW79 1584 aa17.19■□□□□ 0.34
UPK1B-202ENST00000460625 VPS8Q8N3P4 1428 aa17.19■□□□□ 0.34
UPK1B-202ENST00000460625 IQGAP2Q13576 1575 aa17.17■□□□□ 0.34
UPK1B-202ENST00000460625 CHD1O14646 1710 aa17.16■□□□□ 0.34
UPK1B-202ENST00000460625 P3H3Q8IVL6 736 aa17.16■□□□□ 0.34
UPK1B-202ENST00000460625 NUP160Q12769 1436 aa17.14■□□□□ 0.34
UPK1B-202ENST00000460625 KIAA0586Q9BVV6 1533 aa17.14■□□□□ 0.34
UPK1B-202ENST00000460625 EFCAB5A4FU69 1503 aa17.14■□□□□ 0.33
UPK1B-202ENST00000460625 SAMD9Q5K651 1589 aa17.13■□□□□ 0.33
UPK1B-202ENST00000460625 PPARGC1BQ86YN6 1023 aaKnown RBP17.13■□□□□ 0.33
UPK1B-202ENST00000460625 FHOD3Q2V2M9 1422 aa17.13■□□□□ 0.33
UPK1B-202ENST00000460625 UGGT2Q9NYU1 1516 aa17.08■□□□□ 0.33
UPK1B-202ENST00000460625 DISP1Q96F81 1524 aa17.04■□□□□ 0.32
UPK1B-202ENST00000460625 JPH4Q96JJ6 628 aa17.02■□□□□ 0.31
UPK1B-202ENST00000460625 KIAA0556O60303 1618 aa17.01■□□□□ 0.31
UPK1B-202ENST00000460625 TTBK1Q5TCY1 1321 aaPredicted RBP17.01■□□□□ 0.31
UPK1B-202ENST00000460625 PCF11O94913 1555 aaKnown RBP17.01■□□□□ 0.31
UPK1B-202ENST00000460625 FMN1Q68DA7 1419 aa16.98■□□□□ 0.31
UPK1B-202ENST00000460625 APLP2Q06481 763 aa16.96■□□□□ 0.31
UPK1B-202ENST00000460625 CASKIN1Q8WXD9 1431 aa16.95■□□□□ 0.3
UPK1B-202ENST00000460625 CLASP1Q7Z460 1538 aa16.95■□□□□ 0.3
UPK1B-202ENST00000460625 FYCO1Q9BQS8 1478 aa16.94■□□□□ 0.3
UPK1B-202ENST00000460625 SHROOM2Q13796 1616 aa16.93■□□□□ 0.3
UPK1B-202ENST00000460625 KANK4Q5T7N3 995 aaPredicted RBP16.93■□□□□ 0.3
UPK1B-202ENST00000460625 PCGF6Q9BYE7 350 aa16.93■□□□□ 0.3
UPK1B-202ENST00000460625 ATP1B4Q9UN42 357 aaPredicted RBP16.93■□□□□ 0.3
UPK1B-202ENST00000460625 TRIM26Q12899 539 aaPredicted RBP16.92■□□□□ 0.3
UPK1B-202ENST00000460625 PRG4Q92954 1404 aaPredicted RBP16.91■□□□□ 0.3
UPK1B-202ENST00000460625 LRRIQ1Q96JM4 1722 aa16.91■□□□□ 0.3
UPK1B-202ENST00000460625 CARMIL2Q6F5E8 1435 aa16.91■□□□□ 0.3
UPK1B-202ENST00000460625 TIAM1Q13009 1591 aa16.91■□□□□ 0.3
UPK1B-202ENST00000460625 CFAP43Q8NDM7 1665 aa16.88■□□□□ 0.29
UPK1B-202ENST00000460625 ERCC6L2Q5T890 1561 aa16.88■□□□□ 0.29
UPK1B-202ENST00000460625 MAP3K1Q13233 1512 aa16.87■□□□□ 0.29
UPK1B-202ENST00000460625 HECW1Q76N89 1606 aa16.83■□□□□ 0.29
UPK1B-202ENST00000460625 PLB1Q6P1J6 1458 aa16.83■□□□□ 0.28
UPK1B-202ENST00000460625 LRRC9Q6ZRR7 1453 aa16.83■□□□□ 0.28
UPK1B-202ENST00000460625 RAPGEF6Q8TEU7 1601 aa16.82■□□□□ 0.28
UPK1B-202ENST00000460625 OSCARQ8IYS5 282 aa16.82■□□□□ 0.28
UPK1B-202ENST00000460625 ARID3CA6NKF2 412 aa16.81■□□□□ 0.28
UPK1B-202ENST00000460625 NUP153P49790 1475 aaKnown RBP16.8■□□□□ 0.28
UPK1B-202ENST00000460625 EPRSP07814 1512 aaKnown RBP16.8■□□□□ 0.28
UPK1B-202ENST00000460625 CDK13Q14004 1512 aaKnown RBP16.79■□□□□ 0.28
UPK1B-202ENST00000460625 PTPRGP23470 1445 aa16.79■□□□□ 0.28
UPK1B-202ENST00000460625 ABCA8O94911 1581 aa16.77■□□□□ 0.28
UPK1B-202ENST00000460625 CCDC18Q5T9S5 1454 aa16.77■□□□□ 0.28
UPK1B-202ENST00000460625 MAGI3Q5TCQ9 1506 aa16.76■□□□□ 0.27
UPK1B-202ENST00000460625 MTUS2Q5JR59 1369 aa16.72■□□□□ 0.27
UPK1B-202ENST00000460625 PHLDB1Q86UU1 1377 aa16.69■□□□□ 0.26
UPK1B-202ENST00000460625 EHBP1L1Q8N3D4 1523 aa16.69■□□□□ 0.26
UPK1B-202ENST00000460625 UACAQ9BZF9 1416 aa16.69■□□□□ 0.26
UPK1B-202ENST00000460625 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.68■□□□□ 0.26
UPK1B-202ENST00000460625 HNRNPUL2Q1KMD3 747 aaKnown RBP16.68■□□□□ 0.26
UPK1B-202ENST00000460625 ATP10BO94823 1461 aa16.67■□□□□ 0.26
UPK1B-202ENST00000460625 SUPT6HQ7KZ85 1726 aaKnown RBP16.65■□□□□ 0.26
UPK1B-202ENST00000460625 NCOA2Q15596 1464 aa16.65■□□□□ 0.26
UPK1B-202ENST00000460625 RRBP1Q9P2E9 1410 aaKnown RBP16.65■□□□□ 0.26
UPK1B-202ENST00000460625 ABCC2Q92887 1545 aa16.65■□□□□ 0.26
UPK1B-202ENST00000460625 ARHGEF11O15085 1522 aa16.62■□□□□ 0.25
UPK1B-202ENST00000460625 CCNB3Q8WWL7 1395 aa16.61■□□□□ 0.25
UPK1B-202ENST00000460625 CDK11AQ9UQ88 783 aaPredicted RBP16.6■□□□□ 0.25
UPK1B-202ENST00000460625 TROQ12816 1431 aaPredicted RBP16.59■□□□□ 0.25
UPK1B-202ENST00000460625 UHRF1BP1LA0JNW5 1464 aa16.59■□□□□ 0.25
UPK1B-202ENST00000460625 ADCY10Q96PN6 1610 aa16.58■□□□□ 0.25
UPK1B-202ENST00000460625 KIF14Q15058 1648 aa16.57■□□□□ 0.24
UPK1B-202ENST00000460625 PLEKHD1A6NEE1 506 aa16.56■□□□□ 0.24
UPK1B-202ENST00000460625 MYOM3Q5VTT5 1437 aa16.56■□□□□ 0.24
UPK1B-202ENST00000460625 ZCCHC11Q5TAX3 1644 aaKnown RBP16.56■□□□□ 0.24
UPK1B-202ENST00000460625 FGD6Q6ZV73 1430 aa16.55■□□□□ 0.24
UPK1B-202ENST00000460625 KDM5BQ9UGL1 1544 aa16.55■□□□□ 0.24
UPK1B-202ENST00000460625 FAM50AQ14320 339 aaKnown RBP16.52■□□□□ 0.23
UPK1B-202ENST00000460625 RIMBP3CA6NJZ7 1639 aa16.51■□□□□ 0.23
UPK1B-202ENST00000460625 RIMBP3BA6NNM3 1639 aa16.51■□□□□ 0.23
UPK1B-202ENST00000460625 RIMBP3Q9UFD9 1639 aa16.51■□□□□ 0.23
UPK1B-202ENST00000460625 ITGAEP38570 1179 aa16.5■□□□□ 0.23
UPK1B-202ENST00000460625 PTPN23Q9H3S7 1636 aa16.48■□□□□ 0.23
UPK1B-202ENST00000460625 ABCC10Q5T3U5 1492 aa16.48■□□□□ 0.23
UPK1B-202ENST00000460625 GPATCH8Q9UKJ3 1502 aaKnown RBP16.46■□□□□ 0.23
UPK1B-202ENST00000460625 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.46■□□□□ 0.23
UPK1B-202ENST00000460625 MIA2Q96PC5 1412 aa16.45■□□□□ 0.22
UPK1B-202ENST00000460625 CDC42BPAQ5VT25 1732 aa16.44■□□□□ 0.22
UPK1B-202ENST00000460625 TCOF1Q13428 1488 aaKnown RBP16.44■□□□□ 0.22
UPK1B-202ENST00000460625 KCNH8Q96L42 1107 aa16.43■□□□□ 0.22
UPK1B-202ENST00000460625 ITSN2Q9NZM3 1697 aa16.43■□□□□ 0.22
UPK1B-202ENST00000460625 CYB5RLQ6IPT4 315 aa16.43■□□□□ 0.22
UPK1B-202ENST00000460625 TTC37Q6PGP7 1564 aa16.42■□□□□ 0.22
UPK1B-202ENST00000460625 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.42■□□□□ 0.22
UPK1B-202ENST00000460625 ZNF644Q9H582 1327 aaPredicted RBP16.42■□□□□ 0.22
UPK1B-202ENST00000460625 PTPRKQ15262 1439 aa16.4■□□□□ 0.22
UPK1B-202ENST00000460625 CFDP1Q9UEE9 299 aaPredicted RBP16.4■□□□□ 0.22
UPK1B-202ENST00000460625 WDR7Q9Y4E6 1490 aa16.39■□□□□ 0.21
UPK1B-202ENST00000460625 ASXL2Q76L83 1435 aa16.39■□□□□ 0.21
UPK1B-202ENST00000460625 CDC42BPBQ9Y5S2 1711 aa16.38■□□□□ 0.21
UPK1B-202ENST00000460625 CAMSAP2Q08AD1 1489 aa16.37■□□□□ 0.21
UPK1B-202ENST00000460625 NPM1P06748 294 aaKnown RBP eCLIP16.37■□□□□ 0.21
UPK1B-202ENST00000460625 ZNF777Q9ULD5 760 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms