RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 GRIN2AQ12879 1464 aa26.71■■□□□ 1.87
NELFCD-201ENST00000460601 CHMP7Q8WUX9 453 aaPredicted RBP26.69■■□□□ 1.86
NELFCD-201ENST00000460601 ARHGAP35Q9NRY4 1499 aa26.67■■□□□ 1.86
NELFCD-201ENST00000460601 ARAP1Q96P48 1450 aa26.64■■□□□ 1.86
NELFCD-201ENST00000460601 P3H3Q8IVL6 736 aa26.6■■□□□ 1.85
NELFCD-201ENST00000460601 CEP170Q5SW79 1584 aa26.58■■□□□ 1.85
NELFCD-201ENST00000460601 PPARGC1BQ86YN6 1023 aaKnown RBP26.56■■□□□ 1.84
NELFCD-201ENST00000460601 VPS8Q8N3P4 1428 aa26.55■■□□□ 1.84
NELFCD-201ENST00000460601 IQGAP2Q13576 1575 aa26.55■■□□□ 1.84
NELFCD-201ENST00000460601 CHD1O14646 1710 aa26.52■■□□□ 1.84
NELFCD-201ENST00000460601 FHOD3Q2V2M9 1422 aa26.5■■□□□ 1.83
NELFCD-201ENST00000460601 KIAA0586Q9BVV6 1533 aa26.5■■□□□ 1.83
NELFCD-201ENST00000460601 NUP160Q12769 1436 aa26.49■■□□□ 1.83
NELFCD-201ENST00000460601 EFCAB5A4FU69 1503 aa26.46■■□□□ 1.83
NELFCD-201ENST00000460601 SAMD9Q5K651 1589 aa26.45■■□□□ 1.83
NELFCD-201ENST00000460601 TTBK1Q5TCY1 1321 aaPredicted RBP26.41■■□□□ 1.82
NELFCD-201ENST00000460601 UGGT2Q9NYU1 1516 aa26.38■■□□□ 1.81
NELFCD-201ENST00000460601 DISP1Q96F81 1524 aa26.34■■□□□ 1.81
NELFCD-201ENST00000460601 JPH4Q96JJ6 628 aa26.32■■□□□ 1.8
NELFCD-201ENST00000460601 PCF11O94913 1555 aaKnown RBP26.3■■□□□ 1.8
NELFCD-201ENST00000460601 KIAA0556O60303 1618 aa26.3■■□□□ 1.8
NELFCD-201ENST00000460601 ATP1B4Q9UN42 357 aaPredicted RBP26.26■■□□□ 1.79
NELFCD-201ENST00000460601 APLP2Q06481 763 aa26.25■■□□□ 1.79
NELFCD-201ENST00000460601 FMN1Q68DA7 1419 aa26.25■■□□□ 1.79
NELFCD-201ENST00000460601 PCGF6Q9BYE7 350 aa26.21■■□□□ 1.79
NELFCD-201ENST00000460601 KANK4Q5T7N3 995 aaPredicted RBP26.19■■□□□ 1.78
NELFCD-201ENST00000460601 CASKIN1Q8WXD9 1431 aa26.19■■□□□ 1.78
NELFCD-201ENST00000460601 PRG4Q92954 1404 aaPredicted RBP26.18■■□□□ 1.78
NELFCD-201ENST00000460601 CLASP1Q7Z460 1538 aa26.18■■□□□ 1.78
NELFCD-201ENST00000460601 FYCO1Q9BQS8 1478 aa26.17■■□□□ 1.78
NELFCD-201ENST00000460601 CARMIL2Q6F5E8 1435 aa26.15■■□□□ 1.78
NELFCD-201ENST00000460601 TRIM26Q12899 539 aaPredicted RBP26.14■■□□□ 1.78
NELFCD-201ENST00000460601 SHROOM2Q13796 1616 aa26.14■■□□□ 1.78
NELFCD-201ENST00000460601 ERCC6L2Q5T890 1561 aa26.12■■□□□ 1.77
NELFCD-201ENST00000460601 TIAM1Q13009 1591 aa26.11■■□□□ 1.77
NELFCD-201ENST00000460601 LRRIQ1Q96JM4 1722 aa26.11■■□□□ 1.77
NELFCD-201ENST00000460601 ARID3CA6NKF2 412 aa26.08■■□□□ 1.77
NELFCD-201ENST00000460601 PLB1Q6P1J6 1458 aa26.05■■□□□ 1.76
NELFCD-201ENST00000460601 CFAP43Q8NDM7 1665 aa26.05■■□□□ 1.76
NELFCD-201ENST00000460601 OSCARQ8IYS5 282 aa26.04■■□□□ 1.76
NELFCD-201ENST00000460601 MAP3K1Q13233 1512 aa26.03■■□□□ 1.76
NELFCD-201ENST00000460601 HECW1Q76N89 1606 aa26.01■■□□□ 1.75
NELFCD-201ENST00000460601 LRRC9Q6ZRR7 1453 aa26■■□□□ 1.75
NELFCD-201ENST00000460601 RAPGEF6Q8TEU7 1601 aa26■■□□□ 1.75
NELFCD-201ENST00000460601 CDK13Q14004 1512 aaKnown RBP25.99■■□□□ 1.75
NELFCD-201ENST00000460601 NUP153P49790 1475 aaKnown RBP25.98■■□□□ 1.75
NELFCD-201ENST00000460601 EPRSP07814 1512 aaKnown RBP25.97■■□□□ 1.75
NELFCD-201ENST00000460601 PTPRGP23470 1445 aa25.97■■□□□ 1.75
NELFCD-201ENST00000460601 CCDC18Q5T9S5 1454 aa25.91■■□□□ 1.74
NELFCD-201ENST00000460601 MAGI3Q5TCQ9 1506 aa25.91■■□□□ 1.74
NELFCD-201ENST00000460601 ABCA8O94911 1581 aa25.91■■□□□ 1.74
NELFCD-201ENST00000460601 MTUS2Q5JR59 1369 aa25.88■■□□□ 1.73
NELFCD-201ENST00000460601 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.86■■□□□ 1.73
NELFCD-201ENST00000460601 HNRNPUL2Q1KMD3 747 aaKnown RBP25.86■■□□□ 1.73
NELFCD-201ENST00000460601 PHLDB1Q86UU1 1377 aa25.82■■□□□ 1.72
NELFCD-201ENST00000460601 UACAQ9BZF9 1416 aa25.81■■□□□ 1.72
NELFCD-201ENST00000460601 EHBP1L1Q8N3D4 1523 aa25.78■■□□□ 1.72
NELFCD-201ENST00000460601 ATP10BO94823 1461 aa25.77■■□□□ 1.72
NELFCD-201ENST00000460601 NCOA2Q15596 1464 aa25.74■■□□□ 1.71
NELFCD-201ENST00000460601 ABCC2Q92887 1545 aa25.73■■□□□ 1.71
NELFCD-201ENST00000460601 RRBP1Q9P2E9 1410 aaKnown RBP25.71■■□□□ 1.71
NELFCD-201ENST00000460601 SUPT6HQ7KZ85 1726 aaKnown RBP25.71■■□□□ 1.71
NELFCD-201ENST00000460601 CDK11AQ9UQ88 783 aaPredicted RBP25.67■■□□□ 1.7
NELFCD-201ENST00000460601 CCNB3Q8WWL7 1395 aa25.67■■□□□ 1.7
NELFCD-201ENST00000460601 ARHGEF11O15085 1522 aa25.65■■□□□ 1.7
NELFCD-201ENST00000460601 TROQ12816 1431 aaPredicted RBP25.64■■□□□ 1.7
NELFCD-201ENST00000460601 ADCY10Q96PN6 1610 aa25.64■■□□□ 1.69
NELFCD-201ENST00000460601 KIF14Q15058 1648 aa25.62■■□□□ 1.69
NELFCD-201ENST00000460601 UHRF1BP1LA0JNW5 1464 aa25.62■■□□□ 1.69
NELFCD-201ENST00000460601 PLEKHD1A6NEE1 506 aa25.61■■□□□ 1.69
NELFCD-201ENST00000460601 MYOM3Q5VTT5 1437 aa25.59■■□□□ 1.69
NELFCD-201ENST00000460601 ZCCHC11Q5TAX3 1644 aaKnown RBP25.59■■□□□ 1.69
NELFCD-201ENST00000460601 FGD6Q6ZV73 1430 aa25.59■■□□□ 1.69
NELFCD-201ENST00000460601 FAM50AQ14320 339 aaKnown RBP25.58■■□□□ 1.69
NELFCD-201ENST00000460601 ITGAEP38570 1179 aa25.58■■□□□ 1.69
NELFCD-201ENST00000460601 KDM5BQ9UGL1 1544 aa25.57■■□□□ 1.68
NELFCD-201ENST00000460601 RIMBP3CA6NJZ7 1639 aa25.53■■□□□ 1.68
NELFCD-201ENST00000460601 RIMBP3BA6NNM3 1639 aa25.53■■□□□ 1.68
NELFCD-201ENST00000460601 RIMBP3Q9UFD9 1639 aa25.53■■□□□ 1.68
NELFCD-201ENST00000460601 CYB5RLQ6IPT4 315 aa25.48■■□□□ 1.67
NELFCD-201ENST00000460601 KCNH8Q96L42 1107 aa25.46■■□□□ 1.67
NELFCD-201ENST00000460601 PTPN23Q9H3S7 1636 aa25.46■■□□□ 1.67
NELFCD-201ENST00000460601 ABCC10Q5T3U5 1492 aa25.46■■□□□ 1.67
NELFCD-201ENST00000460601 GPATCH8Q9UKJ3 1502 aaKnown RBP25.44■■□□□ 1.66
NELFCD-201ENST00000460601 ZNF644Q9H582 1327 aaPredicted RBP25.43■■□□□ 1.66
NELFCD-201ENST00000460601 MIA2Q96PC5 1412 aa25.4■■□□□ 1.66
NELFCD-201ENST00000460601 TTC37Q6PGP7 1564 aa25.4■■□□□ 1.66
NELFCD-201ENST00000460601 CDC42BPAQ5VT25 1732 aa25.39■■□□□ 1.66
NELFCD-201ENST00000460601 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.39■■□□□ 1.66
NELFCD-201ENST00000460601 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.39■■□□□ 1.65
NELFCD-201ENST00000460601 TCOF1Q13428 1488 aaKnown RBP25.38■■□□□ 1.65
NELFCD-201ENST00000460601 CFDP1Q9UEE9 299 aaPredicted RBP25.38■■□□□ 1.65
NELFCD-201ENST00000460601 ITSN2Q9NZM3 1697 aa25.37■■□□□ 1.65
NELFCD-201ENST00000460601 ZNF777Q9ULD5 760 aaPredicted RBP25.36■■□□□ 1.65
NELFCD-201ENST00000460601 WDR7Q9Y4E6 1490 aa25.36■■□□□ 1.65
NELFCD-201ENST00000460601 PTPRKQ15262 1439 aa25.36■■□□□ 1.65
NELFCD-201ENST00000460601 ASXL2Q76L83 1435 aa25.36■■□□□ 1.65
NELFCD-201ENST00000460601 NPM1P06748 294 aaKnown RBP eCLIP25.34■■□□□ 1.65
NELFCD-201ENST00000460601 CAMSAP2Q08AD1 1489 aa25.31■■□□□ 1.64
NELFCD-201ENST00000460601 CDC42BPBQ9Y5S2 1711 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms