RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 PCGF6Q9BYE7 350 aa22.14■■□□□ 1.13
ERCC3-205ENST00000460485 PBRM1Q86U86 1689 aa22.11■■□□□ 1.13
ERCC3-205ENST00000460485 UBTFP17480 764 aaKnown RBP22.08■■□□□ 1.13
ERCC3-205ENST00000460485 RAPGEF2Q9Y4G8 1499 aa22.06■■□□□ 1.12
ERCC3-205ENST00000460485 ABCA10Q8WWZ4 1543 aa22.06■■□□□ 1.12
ERCC3-205ENST00000460485 ERCC6L2Q5T890 1561 aa22.05■■□□□ 1.12
ERCC3-205ENST00000460485 GRIN2AQ12879 1464 aa22.03■■□□□ 1.12
ERCC3-205ENST00000460485 ABCA5Q8WWZ7 1642 aa22.02■■□□□ 1.12
ERCC3-205ENST00000460485 CEP170Q5SW79 1584 aa22.01■■□□□ 1.11
ERCC3-205ENST00000460485 CLIP1P30622 1438 aa22.01■■□□□ 1.11
ERCC3-205ENST00000460485 NUP160Q12769 1436 aa22.01■■□□□ 1.11
ERCC3-205ENST00000460485 KIF13AQ9H1H9 1805 aa22.01■■□□□ 1.11
ERCC3-205ENST00000460485 EHMT2Q96KQ7 1210 aa22■■□□□ 1.11
ERCC3-205ENST00000460485 HRCP23327 699 aa21.99■■□□□ 1.11
ERCC3-205ENST00000460485 SHROOM2Q13796 1616 aa21.96■■□□□ 1.11
ERCC3-205ENST00000460485 CUL7Q14999 1698 aa21.96■■□□□ 1.11
ERCC3-205ENST00000460485 VPS8Q8N3P4 1428 aa21.93■■□□□ 1.1
ERCC3-205ENST00000460485 ADAMTS12P58397 1594 aa21.88■■□□□ 1.09
ERCC3-205ENST00000460485 FAM69CQ0P6D2 419 aa21.88■■□□□ 1.09
ERCC3-205ENST00000460485 FHAD1B1AJZ9 1412 aa21.88■■□□□ 1.09
ERCC3-205ENST00000460485 KDM4FA0A1W2PPD8 638 aa21.87■■□□□ 1.09
ERCC3-205ENST00000460485 ABCC10Q5T3U5 1492 aa21.87■■□□□ 1.09
ERCC3-205ENST00000460485 ILDR1Q86SU0 546 aaPredicted RBP21.86■■□□□ 1.09
ERCC3-205ENST00000460485 PRG4Q92954 1404 aaPredicted RBP21.83■■□□□ 1.09
ERCC3-205ENST00000460485 NPM1P06748 294 aaKnown RBP eCLIP21.83■■□□□ 1.09
ERCC3-205ENST00000460485 JPH4Q96JJ6 628 aa21.83■■□□□ 1.09
ERCC3-205ENST00000460485 IGF1RP08069 1367 aa21.83■■□□□ 1.08
ERCC3-205ENST00000460485 MAPKBP1O60336 1514 aa21.79■■□□□ 1.08
ERCC3-205ENST00000460485 CARMIL1Q5VZK9 1371 aa21.77■■□□□ 1.08
ERCC3-205ENST00000460485 ZEB1P37275 1124 aaPredicted RBP21.77■■□□□ 1.08
ERCC3-205ENST00000460485 CTTNBP2Q8WZ74 1663 aa21.76■■□□□ 1.07
ERCC3-205ENST00000460485 DIP2BQ9P265 1576 aa21.73■■□□□ 1.07
ERCC3-205ENST00000460485 KDM6BO15054 1643 aa21.71■■□□□ 1.07
ERCC3-205ENST00000460485 EFCAB5A4FU69 1503 aa21.7■■□□□ 1.06
ERCC3-205ENST00000460485 APLP2Q06481 763 aa21.66■■□□□ 1.06
ERCC3-205ENST00000460485 ARHGAP35Q9NRY4 1499 aa21.65■■□□□ 1.06
ERCC3-205ENST00000460485 MAP3K1Q13233 1512 aa21.65■■□□□ 1.06
ERCC3-205ENST00000460485 ADCY10Q96PN6 1610 aa21.63■■□□□ 1.05
ERCC3-205ENST00000460485 TSPOAP1O95153 1857 aa21.58■■□□□ 1.04
ERCC3-205ENST00000460485 CFAP43Q8NDM7 1665 aa21.52■■□□□ 1.04
ERCC3-205ENST00000460485 KIAA0586Q9BVV6 1533 aa21.5■■□□□ 1.03
ERCC3-205ENST00000460485 SAMD9Q5K651 1589 aa21.48■■□□□ 1.03
ERCC3-205ENST00000460485 TIAM1Q13009 1591 aa21.47■■□□□ 1.03
ERCC3-205ENST00000460485 ADGRL1O94910 1474 aa21.46■■□□□ 1.03
ERCC3-205ENST00000460485 PPARGC1BQ86YN6 1023 aaKnown RBP21.45■■□□□ 1.02
ERCC3-205ENST00000460485 FYCO1Q9BQS8 1478 aa21.45■■□□□ 1.02
ERCC3-205ENST00000460485 PTPRGP23470 1445 aa21.43■■□□□ 1.02
ERCC3-205ENST00000460485 GLI2P10070 1586 aa21.43■■□□□ 1.02
ERCC3-205ENST00000460485 PLB1Q6P1J6 1458 aa21.41■■□□□ 1.02
ERCC3-205ENST00000460485 FMN1Q68DA7 1419 aa21.41■■□□□ 1.02
ERCC3-205ENST00000460485 PCF11O94913 1555 aaKnown RBP21.4■■□□□ 1.02
ERCC3-205ENST00000460485 ABCC2Q92887 1545 aa21.39■■□□□ 1.01
ERCC3-205ENST00000460485 PPRC1Q5VV67 1664 aaKnown RBP21.37■■□□□ 1.01
ERCC3-205ENST00000460485 HECW2Q9P2P5 1572 aa21.37■■□□□ 1.01
ERCC3-205ENST00000460485 ASXL2Q76L83 1435 aa21.37■■□□□ 1.01
ERCC3-205ENST00000460485 CASKIN1Q8WXD9 1431 aa21.36■■□□□ 1.01
ERCC3-205ENST00000460485 RRBP1Q9P2E9 1410 aaKnown RBP21.36■■□□□ 1.01
ERCC3-205ENST00000460485 RANGAP1P46060 587 aaPredicted RBP21.34■■□□□ 1.01
ERCC3-205ENST00000460485 IQGAP2Q13576 1575 aa21.34■■□□□ 1.01
ERCC3-205ENST00000460485 COL17A1Q9UMD9 1497 aaPredicted RBP21.32■■□□□ 1
ERCC3-205ENST00000460485 CARMIL2Q6F5E8 1435 aa21.31■■□□□ 1
ERCC3-205ENST00000460485 UHRF1BP1LA0JNW5 1464 aa21.31■■□□□ 1
ERCC3-205ENST00000460485 LRRC9Q6ZRR7 1453 aa21.29■■□□□ 1
ERCC3-205ENST00000460485 TEX14Q8IWB6 1497 aa21.27■■□□□ 1
ERCC3-205ENST00000460485 FHOD3Q2V2M9 1422 aa21.25■□□□□ 0.99
ERCC3-205ENST00000460485 FBXO41Q8TF61 875 aa21.25■□□□□ 0.99
ERCC3-205ENST00000460485 UGGT2Q9NYU1 1516 aa21.24■□□□□ 0.99
ERCC3-205ENST00000460485 UACAQ9BZF9 1416 aa21.24■□□□□ 0.99
ERCC3-205ENST00000460485 MAP3K4Q9Y6R4 1608 aa21.24■□□□□ 0.99
ERCC3-205ENST00000460485 TTBK1Q5TCY1 1321 aaPredicted RBP21.24■□□□□ 0.99
ERCC3-205ENST00000460485 EPRSP07814 1512 aaKnown RBP21.24■□□□□ 0.99
ERCC3-205ENST00000460485 CCER1Q8TC90 406 aaPredicted RBP21.23■□□□□ 0.99
ERCC3-205ENST00000460485 CCDC18Q5T9S5 1454 aa21.21■□□□□ 0.99
ERCC3-205ENST00000460485 HECW1Q76N89 1606 aa21.21■□□□□ 0.99
ERCC3-205ENST00000460485 KDM5BQ9UGL1 1544 aa21.2■□□□□ 0.98
ERCC3-205ENST00000460485 CCNB3Q8WWL7 1395 aa21.19■□□□□ 0.98
ERCC3-205ENST00000460485 KANK4Q5T7N3 995 aaPredicted RBP21.16■□□□□ 0.98
ERCC3-205ENST00000460485 EHBP1L1Q8N3D4 1523 aa21.15■□□□□ 0.98
ERCC3-205ENST00000460485 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.15■□□□□ 0.98
ERCC3-205ENST00000460485 CLSPNQ9HAW4 1339 aa21.14■□□□□ 0.97
ERCC3-205ENST00000460485 LRRIQ1Q96JM4 1722 aa21.12■□□□□ 0.97
ERCC3-205ENST00000460485 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.12■□□□□ 0.97
ERCC3-205ENST00000460485 SUPT6HQ7KZ85 1726 aaKnown RBP21.12■□□□□ 0.97
ERCC3-205ENST00000460485 DISP1Q96F81 1524 aa21.11■□□□□ 0.97
ERCC3-205ENST00000460485 KIAA0556O60303 1618 aa21.11■□□□□ 0.97
ERCC3-205ENST00000460485 ZCCHC11Q5TAX3 1644 aaKnown RBP21.07■□□□□ 0.96
ERCC3-205ENST00000460485 MAGI3Q5TCQ9 1506 aa21.05■□□□□ 0.96
ERCC3-205ENST00000460485 WDR7Q9Y4E6 1490 aa21.05■□□□□ 0.96
ERCC3-205ENST00000460485 HNRNPUL2Q1KMD3 747 aaKnown RBP21.03■□□□□ 0.96
ERCC3-205ENST00000460485 CD109Q6YHK3 1445 aa21.02■□□□□ 0.96
ERCC3-205ENST00000460485 MTUS2Q5JR59 1369 aa21■□□□□ 0.95
ERCC3-205ENST00000460485 P3H3Q8IVL6 736 aa21■□□□□ 0.95
ERCC3-205ENST00000460485 PHLDB1Q86UU1 1377 aa20.98■□□□□ 0.95
ERCC3-205ENST00000460485 RAPGEF6Q8TEU7 1601 aa20.96■□□□□ 0.95
ERCC3-205ENST00000460485 FGD6Q6ZV73 1430 aa20.95■□□□□ 0.94
ERCC3-205ENST00000460485 MYOM3Q5VTT5 1437 aa20.93■□□□□ 0.94
ERCC3-205ENST00000460485 NCOA2Q15596 1464 aa20.93■□□□□ 0.94
ERCC3-205ENST00000460485 ARAP3Q8WWN8 1544 aa20.93■□□□□ 0.94
ERCC3-205ENST00000460485 KCNH8Q96L42 1107 aa20.92■□□□□ 0.94
ERCC3-205ENST00000460485 PTPRMP28827 1452 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 156.1 ms