RNA–Protein interactions for RNA: ENST00000460308.6

ABCD4-202, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-202ENST00000460308 ARAP1Q96P48 1450 aa35.85■■■■□ 3.33
ABCD4-202ENST00000460308 KIAA0586Q9BVV6 1533 aa35.81■■■■□ 3.32
ABCD4-202ENST00000460308 SHROOM2Q13796 1616 aa35.8■■■■□ 3.32
ABCD4-202ENST00000460308 CSRNP3Q8WYN3 585 aa35.77■■■■□ 3.32
ABCD4-202ENST00000460308 EEA1Q15075 1411 aa35.75■■■■□ 3.31
ABCD4-202ENST00000460308 PRG4Q92954 1404 aaPredicted RBP35.74■■■■□ 3.31
ABCD4-202ENST00000460308 ERCC6L2Q5T890 1561 aa35.71■■■■□ 3.31
ABCD4-202ENST00000460308 FAM9AQ8IZU1 332 aaPredicted RBP35.7■■■■□ 3.31
ABCD4-202ENST00000460308 PRXQ9BXM0 1461 aa35.67■■■■□ 3.3
ABCD4-202ENST00000460308 IQGAP2Q13576 1575 aa35.6■■■■□ 3.29
ABCD4-202ENST00000460308 CARMIL2Q6F5E8 1435 aa35.49■■■■□ 3.27
ABCD4-202ENST00000460308 CTTNBP2Q8WZ74 1663 aa35.47■■■■□ 3.27
ABCD4-202ENST00000460308 UGGT2Q9NYU1 1516 aa35.38■■■■□ 3.25
ABCD4-202ENST00000460308 TTBK1Q5TCY1 1321 aaPredicted RBP35.36■■■■□ 3.25
ABCD4-202ENST00000460308 PTPRGP23470 1445 aa35.34■■■■□ 3.25
ABCD4-202ENST00000460308 TNIKQ9UKE5 1360 aa35.34■■■■□ 3.25
ABCD4-202ENST00000460308 KIF21BO75037 1637 aa35.33■■■■□ 3.25
ABCD4-202ENST00000460308 DISP1Q96F81 1524 aa35.32■■■■□ 3.24
ABCD4-202ENST00000460308 EHMT2Q96KQ7 1210 aa35.26■■■■□ 3.24
ABCD4-202ENST00000460308 GOLGA3Q08378 1498 aa35.26■■■■□ 3.23
ABCD4-202ENST00000460308 TRHP20396 242 aaPredicted RBP35.25■■■■□ 3.23
ABCD4-202ENST00000460308 KIAA0556O60303 1618 aa35.24■■■■□ 3.23
ABCD4-202ENST00000460308 NPM1P06748 294 aaKnown RBP eCLIP35.22■■■■□ 3.23
ABCD4-202ENST00000460308 UBTFP17480 764 aaKnown RBP35.21■■■■□ 3.23
ABCD4-202ENST00000460308 RANGAP1P46060 587 aaPredicted RBP35.15■■■■□ 3.22
ABCD4-202ENST00000460308 ADCY10Q96PN6 1610 aa35.12■■■■□ 3.21
ABCD4-202ENST00000460308 P3H3Q8IVL6 736 aa35.1■■■■□ 3.21
ABCD4-202ENST00000460308 UACAQ9BZF9 1416 aa35.07■■■■□ 3.21
ABCD4-202ENST00000460308 UHRF1BP1LA0JNW5 1464 aa35■■■■□ 3.19
ABCD4-202ENST00000460308 SAMD9Q5K651 1589 aa34.99■■■■□ 3.19
ABCD4-202ENST00000460308 ABCC2Q92887 1545 aa34.97■■■■□ 3.19
ABCD4-202ENST00000460308 PLB1Q6P1J6 1458 aa34.91■■■■□ 3.18
ABCD4-202ENST00000460308 MAPKBP1O60336 1514 aa34.91■■■■□ 3.18
ABCD4-202ENST00000460308 EFCAB5A4FU69 1503 aa34.88■■■■□ 3.17
ABCD4-202ENST00000460308 FHOD3Q2V2M9 1422 aa34.85■■■■□ 3.17
ABCD4-202ENST00000460308 ABCA8O94911 1581 aa34.84■■■■□ 3.17
ABCD4-202ENST00000460308 KDM5BQ9UGL1 1544 aa34.83■■■■□ 3.17
ABCD4-202ENST00000460308 FAM69CQ0P6D2 419 aa34.79■■■■□ 3.16
ABCD4-202ENST00000460308 ABCC10Q5T3U5 1492 aa34.77■■■■□ 3.16
ABCD4-202ENST00000460308 ASXL2Q76L83 1435 aa34.76■■■■□ 3.16
ABCD4-202ENST00000460308 ZCCHC11Q5TAX3 1644 aaKnown RBP34.76■■■■□ 3.15
ABCD4-202ENST00000460308 KIF13AQ9H1H9 1805 aa34.73■■■■□ 3.15
ABCD4-202ENST00000460308 ARID3CA6NKF2 412 aa34.7■■■■□ 3.15
ABCD4-202ENST00000460308 ARHGAP35Q9NRY4 1499 aa34.7■■■■□ 3.15
ABCD4-202ENST00000460308 RAPGEF6Q8TEU7 1601 aa34.7■■■■□ 3.14
ABCD4-202ENST00000460308 DIP2BQ9P265 1576 aa34.68■■■■□ 3.14
ABCD4-202ENST00000460308 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.63■■■■□ 3.13
ABCD4-202ENST00000460308 HNRNPUL2Q1KMD3 747 aaKnown RBP34.63■■■■□ 3.13
ABCD4-202ENST00000460308 FMN1Q68DA7 1419 aa34.61■■■■□ 3.13
ABCD4-202ENST00000460308 ATP10BO94823 1461 aa34.6■■■■□ 3.13
ABCD4-202ENST00000460308 WDR7Q9Y4E6 1490 aa34.58■■■■□ 3.13
ABCD4-202ENST00000460308 CLIP1P30622 1438 aa34.55■■■■□ 3.12
ABCD4-202ENST00000460308 NUP153P49790 1475 aaKnown RBP34.55■■■■□ 3.12
ABCD4-202ENST00000460308 ATP1B4Q9UN42 357 aaPredicted RBP34.55■■■■□ 3.12
ABCD4-202ENST00000460308 KCNH8Q96L42 1107 aa34.54■■■■□ 3.12
ABCD4-202ENST00000460308 EPRSP07814 1512 aaKnown RBP34.54■■■■□ 3.12
ABCD4-202ENST00000460308 LOC105371045A0A1W2PR82 267 aa34.53■■■■□ 3.12
ABCD4-202ENST00000460308 GLI2P10070 1586 aa34.51■■■■□ 3.12
ABCD4-202ENST00000460308 TSPOAP1O95153 1857 aa34.48■■■■□ 3.11
ABCD4-202ENST00000460308 PLEKHD1A6NEE1 506 aa34.43■■■■□ 3.1
ABCD4-202ENST00000460308 HECW1Q76N89 1606 aa34.41■■■■□ 3.1
ABCD4-202ENST00000460308 CEP162Q5TB80 1403 aa34.38■■■■□ 3.09
ABCD4-202ENST00000460308 MAP3K4Q9Y6R4 1608 aa34.34■■■■□ 3.09
ABCD4-202ENST00000460308 CDK13Q14004 1512 aaKnown RBP34.32■■■■□ 3.08
ABCD4-202ENST00000460308 CD109Q6YHK3 1445 aa34.3■■■■□ 3.08
ABCD4-202ENST00000460308 CASKIN1Q8WXD9 1431 aa34.3■■■■□ 3.08
ABCD4-202ENST00000460308 CDK11AQ9UQ88 783 aaPredicted RBP34.3■■■■□ 3.08
ABCD4-202ENST00000460308 CFAP43Q8NDM7 1665 aa34.28■■■■□ 3.08
ABCD4-202ENST00000460308 PCF11O94913 1555 aaKnown RBP34.26■■■■□ 3.07
ABCD4-202ENST00000460308 TEX14Q8IWB6 1497 aa34.26■■■■□ 3.07
ABCD4-202ENST00000460308 PPRC1Q5VV67 1664 aaKnown RBP34.25■■■■□ 3.07
ABCD4-202ENST00000460308 FYCO1Q9BQS8 1478 aa34.21■■■■□ 3.07
ABCD4-202ENST00000460308 ABCA9Q8IUA7 1624 aa34.19■■■■□ 3.06
ABCD4-202ENST00000460308 CCDC18Q5T9S5 1454 aa34.18■■■■□ 3.06
ABCD4-202ENST00000460308 MAGI3Q5TCQ9 1506 aa34.18■■■■□ 3.06
ABCD4-202ENST00000460308 KDM6BO15054 1643 aa34.17■■■■□ 3.06
ABCD4-202ENST00000460308 LRRIQ1Q96JM4 1722 aa34.16■■■■□ 3.06
ABCD4-202ENST00000460308 TROQ12816 1431 aaPredicted RBP34.08■■■■□ 3.05
ABCD4-202ENST00000460308 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.06■■■■□ 3.04
ABCD4-202ENST00000460308 KIF14Q15058 1648 aa33.99■■■■□ 3.03
ABCD4-202ENST00000460308 PHLDB1Q86UU1 1377 aa33.98■■■■□ 3.03
ABCD4-202ENST00000460308 TTC37Q6PGP7 1564 aa33.98■■■■□ 3.03
ABCD4-202ENST00000460308 COL17A1Q9UMD9 1497 aaPredicted RBP33.97■■■■□ 3.03
ABCD4-202ENST00000460308 VPS8Q8N3P4 1428 aa33.96■■■■□ 3.03
ABCD4-202ENST00000460308 NEO1Q92859 1461 aa33.95■■■■□ 3.02
ABCD4-202ENST00000460308 PLCH2O75038 1416 aa33.9■■■■□ 3.02
ABCD4-202ENST00000460308 FANCAO15360 1455 aa33.89■■■■□ 3.02
ABCD4-202ENST00000460308 ARAP3Q8WWN8 1544 aa33.89■■■■□ 3.02
ABCD4-202ENST00000460308 MTUS2Q5JR59 1369 aa33.88■■■■□ 3.01
ABCD4-202ENST00000460308 MYO5CQ9NQX4 1742 aa33.86■■■■□ 3.01
ABCD4-202ENST00000460308 CFAP74Q9C0B2 1584 aa33.85■■■■□ 3.01
ABCD4-202ENST00000460308 EFCAB2Q5VUJ9 269 aa33.84■■■■□ 3.01
ABCD4-202ENST00000460308 AKNAQ7Z591 1439 aa33.84■■■■□ 3.01
ABCD4-202ENST00000460308 RAPGEF3O95398 923 aa33.78■■■■□ 3
ABCD4-202ENST00000460308 ARHGAP5Q13017 1502 aa33.77■■■■□ 3
ABCD4-202ENST00000460308 APLP2Q06481 763 aa33.75■■■□□ 2.99
ABCD4-202ENST00000460308 EHBP1L1Q8N3D4 1523 aa33.74■■■□□ 2.99
ABCD4-202ENST00000460308 TIAM1Q13009 1591 aa33.73■■■□□ 2.99
ABCD4-202ENST00000460308 DENND4BO75064 1496 aaPredicted RBP33.73■■■□□ 2.99
ABCD4-202ENST00000460308 ADGRL1O94910 1474 aa33.71■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms