RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 JPH4Q96JJ6 628 aa32.53■■■□□ 2.8
COL5A1-203ENST00000460264 CARMIL1Q5VZK9 1371 aa32.53■■■□□ 2.8
COL5A1-203ENST00000460264 KIAA0586Q9BVV6 1533 aa32.51■■■□□ 2.8
COL5A1-203ENST00000460264 TRHP20396 242 aaPredicted RBP32.48■■■□□ 2.79
COL5A1-203ENST00000460264 RAPGEF2Q9Y4G8 1499 aa32.32■■■□□ 2.76
COL5A1-203ENST00000460264 IQGAP2Q13576 1575 aa32.32■■■□□ 2.76
COL5A1-203ENST00000460264 ADCY10Q96PN6 1610 aa32.22■■■□□ 2.75
COL5A1-203ENST00000460264 CARMIL2Q6F5E8 1435 aa32.16■■■□□ 2.74
COL5A1-203ENST00000460264 CTTNBP2Q8WZ74 1663 aa32.15■■■□□ 2.74
COL5A1-203ENST00000460264 UGGT2Q9NYU1 1516 aa32.11■■■□□ 2.73
COL5A1-203ENST00000460264 KIF13AQ9H1H9 1805 aa32.11■■■□□ 2.73
COL5A1-203ENST00000460264 DISP1Q96F81 1524 aa32.1■■■□□ 2.73
COL5A1-203ENST00000460264 PRXQ9BXM0 1461 aa32.1■■■□□ 2.73
COL5A1-203ENST00000460264 PTPRGP23470 1445 aa32.09■■■□□ 2.73
COL5A1-203ENST00000460264 TNIKQ9UKE5 1360 aa32.07■■■□□ 2.73
COL5A1-203ENST00000460264 MAPKBP1O60336 1514 aa32.07■■■□□ 2.72
COL5A1-203ENST00000460264 KIAA0556O60303 1618 aa32.02■■■□□ 2.72
COL5A1-203ENST00000460264 NPM1P06748 294 aaKnown RBP eCLIP32.01■■■□□ 2.71
COL5A1-203ENST00000460264 TTBK1Q5TCY1 1321 aaPredicted RBP31.97■■■□□ 2.71
COL5A1-203ENST00000460264 ABCC10Q5T3U5 1492 aa31.94■■■□□ 2.7
COL5A1-203ENST00000460264 DIP2BQ9P265 1576 aa31.94■■■□□ 2.7
COL5A1-203ENST00000460264 UHRF1BP1LA0JNW5 1464 aa31.91■■■□□ 2.7
COL5A1-203ENST00000460264 ABCC2Q92887 1545 aa31.91■■■□□ 2.7
COL5A1-203ENST00000460264 EEA1Q15075 1411 aa31.91■■■□□ 2.7
COL5A1-203ENST00000460264 CSRNP3Q8WYN3 585 aa31.89■■■□□ 2.7
COL5A1-203ENST00000460264 UACAQ9BZF9 1416 aa31.88■■■□□ 2.69
COL5A1-203ENST00000460264 GOLGA3Q08378 1498 aa31.86■■■□□ 2.69
COL5A1-203ENST00000460264 FAM69CQ0P6D2 419 aa31.82■■■□□ 2.68
COL5A1-203ENST00000460264 KDM5BQ9UGL1 1544 aa31.76■■■□□ 2.68
COL5A1-203ENST00000460264 ZCCHC11Q5TAX3 1644 aaKnown RBP31.75■■■□□ 2.67
COL5A1-203ENST00000460264 ASXL2Q76L83 1435 aa31.75■■■□□ 2.67
COL5A1-203ENST00000460264 PLB1Q6P1J6 1458 aa31.72■■■□□ 2.67
COL5A1-203ENST00000460264 TSPOAP1O95153 1857 aa31.69■■■□□ 2.66
COL5A1-203ENST00000460264 ABCA8O94911 1581 aa31.69■■■□□ 2.66
COL5A1-203ENST00000460264 KIF21BO75037 1637 aa31.69■■■□□ 2.66
COL5A1-203ENST00000460264 CHIC1Q5VXU3 224 aa31.69■■■□□ 2.66
COL5A1-203ENST00000460264 FAM9AQ8IZU1 332 aaPredicted RBP31.68■■■□□ 2.66
COL5A1-203ENST00000460264 SAMD9Q5K651 1589 aa31.68■■■□□ 2.66
COL5A1-203ENST00000460264 GLI2P10070 1586 aa31.64■■■□□ 2.66
COL5A1-203ENST00000460264 EPRSP07814 1512 aaKnown RBP31.56■■■□□ 2.64
COL5A1-203ENST00000460264 PPRC1Q5VV67 1664 aaKnown RBP31.56■■■□□ 2.64
COL5A1-203ENST00000460264 P3H3Q8IVL6 736 aa31.53■■■□□ 2.64
COL5A1-203ENST00000460264 KDM6BO15054 1643 aa31.53■■■□□ 2.64
COL5A1-203ENST00000460264 MAP3K4Q9Y6R4 1608 aa31.53■■■□□ 2.64
COL5A1-203ENST00000460264 WDR7Q9Y4E6 1490 aa31.52■■■□□ 2.64
COL5A1-203ENST00000460264 RAPGEF6Q8TEU7 1601 aa31.45■■■□□ 2.62
COL5A1-203ENST00000460264 EFCAB5A4FU69 1503 aa31.42■■■□□ 2.62
COL5A1-203ENST00000460264 FHOD3Q2V2M9 1422 aa31.41■■■□□ 2.62
COL5A1-203ENST00000460264 RANGAP1P46060 587 aaPredicted RBP31.4■■■□□ 2.62
COL5A1-203ENST00000460264 ATP10BO94823 1461 aa31.38■■■□□ 2.61
COL5A1-203ENST00000460264 CFAP43Q8NDM7 1665 aa31.36■■■□□ 2.61
COL5A1-203ENST00000460264 TEX14Q8IWB6 1497 aa31.34■■■□□ 2.61
COL5A1-203ENST00000460264 ARID3CA6NKF2 412 aa31.32■■■□□ 2.6
COL5A1-203ENST00000460264 NUP153P49790 1475 aaKnown RBP31.31■■■□□ 2.6
COL5A1-203ENST00000460264 EHMT2Q96KQ7 1210 aa31.3■■■□□ 2.6
COL5A1-203ENST00000460264 UBTFP17480 764 aaKnown RBP31.28■■■□□ 2.6
COL5A1-203ENST00000460264 KCNH8Q96L42 1107 aa31.27■■■□□ 2.6
COL5A1-203ENST00000460264 CD109Q6YHK3 1445 aa31.24■■■□□ 2.59
COL5A1-203ENST00000460264 MAGI3Q5TCQ9 1506 aa31.24■■■□□ 2.59
COL5A1-203ENST00000460264 COL17A1Q9UMD9 1497 aaPredicted RBP31.23■■■□□ 2.59
COL5A1-203ENST00000460264 ABCA9Q8IUA7 1624 aa31.2■■■□□ 2.58
COL5A1-203ENST00000460264 ARHGAP35Q9NRY4 1499 aa31.17■■■□□ 2.58
COL5A1-203ENST00000460264 AEBP2Q6ZN18 517 aaPredicted RBP31.16■■■□□ 2.58
COL5A1-203ENST00000460264 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.12■■■□□ 2.57
COL5A1-203ENST00000460264 HNRNPUL2Q1KMD3 747 aaKnown RBP31.12■■■□□ 2.57
COL5A1-203ENST00000460264 FMN1Q68DA7 1419 aa31.08■■■□□ 2.57
COL5A1-203ENST00000460264 HECW1Q76N89 1606 aa31.06■■■□□ 2.56
COL5A1-203ENST00000460264 CDK13Q14004 1512 aaKnown RBP31.05■■■□□ 2.56
COL5A1-203ENST00000460264 ARAP3Q8WWN8 1544 aa30.99■■■□□ 2.55
COL5A1-203ENST00000460264 PLEKHD1A6NEE1 506 aa30.99■■■□□ 2.55
COL5A1-203ENST00000460264 NEO1Q92859 1461 aa30.95■■■□□ 2.54
COL5A1-203ENST00000460264 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.94■■■□□ 2.54
COL5A1-203ENST00000460264 TTC37Q6PGP7 1564 aa30.94■■■□□ 2.54
COL5A1-203ENST00000460264 LRRIQ1Q96JM4 1722 aa30.93■■■□□ 2.54
COL5A1-203ENST00000460264 PHLDB1Q86UU1 1377 aa30.92■■■□□ 2.54
COL5A1-203ENST00000460264 KDM4FA0A1W2PPD8 638 aa30.92■■■□□ 2.54
COL5A1-203ENST00000460264 PCF11O94913 1555 aaKnown RBP30.88■■■□□ 2.53
COL5A1-203ENST00000460264 ATP1B4Q9UN42 357 aaPredicted RBP30.87■■■□□ 2.53
COL5A1-203ENST00000460264 ADGRL1O94910 1474 aa30.86■■■□□ 2.53
COL5A1-203ENST00000460264 CFAP74Q9C0B2 1584 aa30.85■■■□□ 2.53
COL5A1-203ENST00000460264 FRMPD1Q5SYB0 1578 aa30.83■■■□□ 2.53
COL5A1-203ENST00000460264 CLIP1P30622 1438 aa30.81■■■□□ 2.52
COL5A1-203ENST00000460264 CASKIN1Q8WXD9 1431 aa30.81■■■□□ 2.52
COL5A1-203ENST00000460264 FANCAO15360 1455 aa30.8■■■□□ 2.52
COL5A1-203ENST00000460264 KIF14Q15058 1648 aa30.78■■■□□ 2.52
COL5A1-203ENST00000460264 MYO5CQ9NQX4 1742 aa30.76■■■□□ 2.52
COL5A1-203ENST00000460264 CDK11AQ9UQ88 783 aaPredicted RBP30.76■■■□□ 2.51
COL5A1-203ENST00000460264 RICTORQ6R327 1708 aa30.76■■■□□ 2.51
COL5A1-203ENST00000460264 TROQ12816 1431 aaPredicted RBP30.75■■■□□ 2.51
COL5A1-203ENST00000460264 CCDC18Q5T9S5 1454 aa30.75■■■□□ 2.51
COL5A1-203ENST00000460264 AKNAQ7Z591 1439 aa30.74■■■□□ 2.51
COL5A1-203ENST00000460264 RAPGEF3O95398 923 aa30.74■■■□□ 2.51
COL5A1-203ENST00000460264 FYCO1Q9BQS8 1478 aa30.74■■■□□ 2.51
COL5A1-203ENST00000460264 PLCH2O75038 1416 aa30.71■■■□□ 2.51
COL5A1-203ENST00000460264 DENND4BO75064 1496 aaPredicted RBP30.7■■■□□ 2.5
COL5A1-203ENST00000460264 ARHGEF40Q8TER5 1519 aa30.64■■■□□ 2.5
COL5A1-203ENST00000460264 ZMYM4Q5VZL5 1548 aa30.63■■■□□ 2.49
COL5A1-203ENST00000460264 CEP162Q5TB80 1403 aa30.58■■■□□ 2.49
COL5A1-203ENST00000460264 CDC42BPBQ9Y5S2 1711 aa30.57■■■□□ 2.48
COL5A1-203ENST00000460264 ARHGAP5Q13017 1502 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms