RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 RAPGEF2Q9Y4G8 1499 aa24.85■■□□□ 1.57
CMTM3-203ENST00000460097 CEP170Q5SW79 1584 aa24.83■■□□□ 1.57
CMTM3-203ENST00000460097 CLASP1Q7Z460 1538 aa24.83■■□□□ 1.56
CMTM3-203ENST00000460097 PRXQ9BXM0 1461 aa24.81■■□□□ 1.56
CMTM3-203ENST00000460097 KIAA0586Q9BVV6 1533 aa24.72■■□□□ 1.55
CMTM3-203ENST00000460097 JPH4Q96JJ6 628 aa24.71■■□□□ 1.55
CMTM3-203ENST00000460097 ARHGEF11O15085 1522 aa24.68■■□□□ 1.54
CMTM3-203ENST00000460097 LOC105371045A0A1W2PR82 267 aa24.65■■□□□ 1.54
CMTM3-203ENST00000460097 RIMBP3CA6NJZ7 1639 aa24.63■■□□□ 1.53
CMTM3-203ENST00000460097 RIMBP3BA6NNM3 1639 aa24.63■■□□□ 1.53
CMTM3-203ENST00000460097 RIMBP3Q9UFD9 1639 aa24.63■■□□□ 1.53
CMTM3-203ENST00000460097 SHROOM2Q13796 1616 aa24.61■■□□□ 1.53
CMTM3-203ENST00000460097 KIF21BO75037 1637 aa24.6■■□□□ 1.53
CMTM3-203ENST00000460097 PRG4Q92954 1404 aaPredicted RBP24.59■■□□□ 1.53
CMTM3-203ENST00000460097 IQGAP2Q13576 1575 aa24.57■■□□□ 1.52
CMTM3-203ENST00000460097 EHMT2Q96KQ7 1210 aa24.57■■□□□ 1.52
CMTM3-203ENST00000460097 CYB5RLQ6IPT4 315 aa24.53■■□□□ 1.52
CMTM3-203ENST00000460097 CTTNBP2Q8WZ74 1663 aa24.52■■□□□ 1.52
CMTM3-203ENST00000460097 ERCC6L2Q5T890 1561 aa24.52■■□□□ 1.52
CMTM3-203ENST00000460097 UBTFP17480 764 aaKnown RBP24.52■■□□□ 1.52
CMTM3-203ENST00000460097 GOLGA3Q08378 1498 aa24.51■■□□□ 1.51
CMTM3-203ENST00000460097 ARAP1Q96P48 1450 aa24.5■■□□□ 1.51
CMTM3-203ENST00000460097 CARMIL2Q6F5E8 1435 aa24.47■■□□□ 1.51
CMTM3-203ENST00000460097 UGGT2Q9NYU1 1516 aa24.46■■□□□ 1.51
CMTM3-203ENST00000460097 DISP1Q96F81 1524 aa24.4■■□□□ 1.5
CMTM3-203ENST00000460097 RANGAP1P46060 587 aaPredicted RBP24.38■■□□□ 1.49
CMTM3-203ENST00000460097 TNIKQ9UKE5 1360 aa24.37■■□□□ 1.49
CMTM3-203ENST00000460097 PTPRGP23470 1445 aa24.35■■□□□ 1.49
CMTM3-203ENST00000460097 TTBK1Q5TCY1 1321 aaPredicted RBP24.34■■□□□ 1.49
CMTM3-203ENST00000460097 KIAA0556O60303 1618 aa24.32■■□□□ 1.48
CMTM3-203ENST00000460097 P3H3Q8IVL6 736 aa24.31■■□□□ 1.48
CMTM3-203ENST00000460097 SAMD9Q5K651 1589 aa24.24■■□□□ 1.47
CMTM3-203ENST00000460097 EFCAB5A4FU69 1503 aa24.2■■□□□ 1.46
CMTM3-203ENST00000460097 UACAQ9BZF9 1416 aa24.17■■□□□ 1.46
CMTM3-203ENST00000460097 SCAF1Q9H7N4 1312 aaKnown RBP24.17■■□□□ 1.46
CMTM3-203ENST00000460097 FHOD3Q2V2M9 1422 aa24.16■■□□□ 1.46
CMTM3-203ENST00000460097 NPM1P06748 294 aaKnown RBP eCLIP24.16■■□□□ 1.46
CMTM3-203ENST00000460097 ARHGAP35Q9NRY4 1499 aa24.14■■□□□ 1.46
CMTM3-203ENST00000460097 ADCY10Q96PN6 1610 aa24.12■■□□□ 1.45
CMTM3-203ENST00000460097 PLB1Q6P1J6 1458 aa24.11■■□□□ 1.45
CMTM3-203ENST00000460097 UHRF1BP1LA0JNW5 1464 aa24.1■■□□□ 1.45
CMTM3-203ENST00000460097 CLIP1P30622 1438 aa24.09■■□□□ 1.45
CMTM3-203ENST00000460097 ABCC2Q92887 1545 aa24.08■■□□□ 1.45
CMTM3-203ENST00000460097 ABCA8O94911 1581 aa24.06■■□□□ 1.44
CMTM3-203ENST00000460097 CEP162Q5TB80 1403 aa24.04■■□□□ 1.44
CMTM3-203ENST00000460097 FMN1Q68DA7 1419 aa24.02■■□□□ 1.44
CMTM3-203ENST00000460097 KDM5BQ9UGL1 1544 aa23.99■■□□□ 1.43
CMTM3-203ENST00000460097 MYT1Q01538 1121 aa23.98■■□□□ 1.43
CMTM3-203ENST00000460097 RAPGEF6Q8TEU7 1601 aa23.98■■□□□ 1.43
CMTM3-203ENST00000460097 TRHP20396 242 aaPredicted RBP23.96■■□□□ 1.43
CMTM3-203ENST00000460097 ARID3CA6NKF2 412 aa23.96■■□□□ 1.43
CMTM3-203ENST00000460097 ATP1B4Q9UN42 357 aaPredicted RBP23.94■■□□□ 1.42
CMTM3-203ENST00000460097 MAPKBP1O60336 1514 aa23.93■■□□□ 1.42
CMTM3-203ENST00000460097 ZCCHC11Q5TAX3 1644 aaKnown RBP23.91■■□□□ 1.42
CMTM3-203ENST00000460097 ATP10BO94823 1461 aa23.91■■□□□ 1.42
CMTM3-203ENST00000460097 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.91■■□□□ 1.42
CMTM3-203ENST00000460097 HNRNPUL2Q1KMD3 747 aaKnown RBP23.91■■□□□ 1.42
CMTM3-203ENST00000460097 NUP153P49790 1475 aaKnown RBP23.91■■□□□ 1.42
CMTM3-203ENST00000460097 ASXL2Q76L83 1435 aa23.89■■□□□ 1.41
CMTM3-203ENST00000460097 ACIN1Q9UKV3 1341 aaKnown RBP23.87■■□□□ 1.41
CMTM3-203ENST00000460097 CASKIN1Q8WXD9 1431 aa23.84■■□□□ 1.41
CMTM3-203ENST00000460097 FAM69CQ0P6D2 419 aa23.83■■□□□ 1.4
CMTM3-203ENST00000460097 ABCC10Q5T3U5 1492 aa23.82■■□□□ 1.4
CMTM3-203ENST00000460097 HECW1Q76N89 1606 aa23.82■■□□□ 1.4
CMTM3-203ENST00000460097 WDR7Q9Y4E6 1490 aa23.79■■□□□ 1.4
CMTM3-203ENST00000460097 PLEKHD1A6NEE1 506 aa23.79■■□□□ 1.4
CMTM3-203ENST00000460097 EPRSP07814 1512 aaKnown RBP23.79■■□□□ 1.4
CMTM3-203ENST00000460097 KCNH8Q96L42 1107 aa23.78■■□□□ 1.4
CMTM3-203ENST00000460097 PCF11O94913 1555 aaKnown RBP23.78■■□□□ 1.4
CMTM3-203ENST00000460097 FYCO1Q9BQS8 1478 aa23.78■■□□□ 1.4
CMTM3-203ENST00000460097 CDK13Q14004 1512 aaKnown RBP23.76■■□□□ 1.39
CMTM3-203ENST00000460097 DIP2BQ9P265 1576 aa23.75■■□□□ 1.39
CMTM3-203ENST00000460097 CDK11AQ9UQ88 783 aaPredicted RBP23.75■■□□□ 1.39
CMTM3-203ENST00000460097 VPS8Q8N3P4 1428 aa23.73■■□□□ 1.39
CMTM3-203ENST00000460097 CCDC18Q5T9S5 1454 aa23.71■■□□□ 1.39
CMTM3-203ENST00000460097 KIF13AQ9H1H9 1805 aa23.71■■□□□ 1.39
CMTM3-203ENST00000460097 CENPBP07199 599 aaPredicted RBP23.7■■□□□ 1.38
CMTM3-203ENST00000460097 GLI2P10070 1586 aa23.68■■□□□ 1.38
CMTM3-203ENST00000460097 LRRIQ1Q96JM4 1722 aa23.68■■□□□ 1.38
CMTM3-203ENST00000460097 NEUROD1Q13562 356 aa23.63■■□□□ 1.37
CMTM3-203ENST00000460097 TROQ12816 1431 aaPredicted RBP23.61■■□□□ 1.37
CMTM3-203ENST00000460097 CCER1Q8TC90 406 aaPredicted RBP23.6■■□□□ 1.37
CMTM3-203ENST00000460097 CD109Q6YHK3 1445 aa23.59■■□□□ 1.37
CMTM3-203ENST00000460097 MAP3K4Q9Y6R4 1608 aa23.56■■□□□ 1.36
CMTM3-203ENST00000460097 APLP2Q06481 763 aa23.55■■□□□ 1.36
CMTM3-203ENST00000460097 DIEXFQ68CQ4 756 aaKnown RBP23.55■■□□□ 1.36
CMTM3-203ENST00000460097 TSPOAP1O95153 1857 aa23.55■■□□□ 1.36
CMTM3-203ENST00000460097 ABCA9Q8IUA7 1624 aa23.54■■□□□ 1.36
CMTM3-203ENST00000460097 MTUS2Q5JR59 1369 aa23.54■■□□□ 1.36
CMTM3-203ENST00000460097 CFAP43Q8NDM7 1665 aa23.54■■□□□ 1.36
CMTM3-203ENST00000460097 MAGI3Q5TCQ9 1506 aa23.54■■□□□ 1.36
CMTM3-203ENST00000460097 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.52■■□□□ 1.363e-7■■■■■ 59
CMTM3-203ENST00000460097 TIAM1Q13009 1591 aa23.49■■□□□ 1.35
CMTM3-203ENST00000460097 KIF14Q15058 1648 aa23.49■■□□□ 1.35
CMTM3-203ENST00000460097 MAP3K1Q13233 1512 aa23.49■■□□□ 1.35
CMTM3-203ENST00000460097 TEX14Q8IWB6 1497 aa23.48■■□□□ 1.35
CMTM3-203ENST00000460097 PPRC1Q5VV67 1664 aaKnown RBP23.47■■□□□ 1.35
CMTM3-203ENST00000460097 GTF3C3Q9Y5Q9 886 aa23.45■■□□□ 1.34
CMTM3-203ENST00000460097 TTC37Q6PGP7 1564 aa23.45■■□□□ 1.34
CMTM3-203ENST00000460097 KANK4Q5T7N3 995 aaPredicted RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms