RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 PRG4Q92954 1404 aaPredicted RBP36.02■■■■□ 3.36
SRM-202ENST00000459997 JPH4Q96JJ6 628 aa36■■■■□ 3.35
SRM-202ENST00000459997 CARMIL1Q5VZK9 1371 aa35.92■■■■□ 3.34
SRM-202ENST00000459997 KIAA0586Q9BVV6 1533 aa35.91■■■■□ 3.34
SRM-202ENST00000459997 IQGAP2Q13576 1575 aa35.66■■■■□ 3.3
SRM-202ENST00000459997 RAPGEF2Q9Y4G8 1499 aa35.66■■■■□ 3.3
SRM-202ENST00000459997 ADCY10Q96PN6 1610 aa35.58■■■■□ 3.29
SRM-202ENST00000459997 CARMIL2Q6F5E8 1435 aa35.56■■■■□ 3.28
SRM-202ENST00000459997 NPM1P06748 294 aaKnown RBP eCLIP35.51■■■■□ 3.28
SRM-202ENST00000459997 PTPRGP23470 1445 aa35.5■■■■□ 3.27
SRM-202ENST00000459997 KIF13AQ9H1H9 1805 aa35.47■■■■□ 3.27
SRM-202ENST00000459997 TNIKQ9UKE5 1360 aa35.47■■■■□ 3.27
SRM-202ENST00000459997 TTBK1Q5TCY1 1321 aaPredicted RBP35.46■■■■□ 3.27
SRM-202ENST00000459997 MAPKBP1O60336 1514 aa35.44■■■■□ 3.26
SRM-202ENST00000459997 DISP1Q96F81 1524 aa35.43■■■■□ 3.26
SRM-202ENST00000459997 UGGT2Q9NYU1 1516 aa35.42■■■■□ 3.26
SRM-202ENST00000459997 CTTNBP2Q8WZ74 1663 aa35.4■■■■□ 3.26
SRM-202ENST00000459997 PRXQ9BXM0 1461 aa35.38■■■■□ 3.25
SRM-202ENST00000459997 ABCC10Q5T3U5 1492 aa35.35■■■■□ 3.25
SRM-202ENST00000459997 KIAA0556O60303 1618 aa35.32■■■■□ 3.25
SRM-202ENST00000459997 DIP2BQ9P265 1576 aa35.3■■■■□ 3.24
SRM-202ENST00000459997 FAM69CQ0P6D2 419 aa35.29■■■■□ 3.24
SRM-202ENST00000459997 ABCC2Q92887 1545 aa35.27■■■■□ 3.24
SRM-202ENST00000459997 UHRF1BP1LA0JNW5 1464 aa35.25■■■■□ 3.23
SRM-202ENST00000459997 UACAQ9BZF9 1416 aa35.24■■■■□ 3.23
SRM-202ENST00000459997 CSRNP3Q8WYN3 585 aa35.19■■■■□ 3.22
SRM-202ENST00000459997 GOLGA3Q08378 1498 aa35.17■■■■□ 3.22
SRM-202ENST00000459997 EEA1Q15075 1411 aa35.14■■■■□ 3.22
SRM-202ENST00000459997 ASXL2Q76L83 1435 aa35.11■■■■□ 3.21
SRM-202ENST00000459997 PLB1Q6P1J6 1458 aa35.09■■■■□ 3.21
SRM-202ENST00000459997 KDM5BQ9UGL1 1544 aa35.08■■■■□ 3.21
SRM-202ENST00000459997 ZCCHC11Q5TAX3 1644 aaKnown RBP35.06■■■■□ 3.2
SRM-202ENST00000459997 TSPOAP1O95153 1857 aa35.04■■■■□ 3.2
SRM-202ENST00000459997 FAM9AQ8IZU1 332 aaPredicted RBP34.99■■■■□ 3.19
SRM-202ENST00000459997 GLI2P10070 1586 aa34.97■■■■□ 3.19
SRM-202ENST00000459997 ABCA8O94911 1581 aa34.96■■■■□ 3.19
SRM-202ENST00000459997 KDM6BO15054 1643 aa34.91■■■■□ 3.18
SRM-202ENST00000459997 EPRSP07814 1512 aaKnown RBP34.91■■■■□ 3.18
SRM-202ENST00000459997 SAMD9Q5K651 1589 aa34.89■■■■□ 3.18
SRM-202ENST00000459997 P3H3Q8IVL6 736 aa34.89■■■■□ 3.18
SRM-202ENST00000459997 CHIC1Q5VXU3 224 aa34.88■■■■□ 3.17
SRM-202ENST00000459997 KIF21BO75037 1637 aa34.85■■■■□ 3.17
SRM-202ENST00000459997 PPRC1Q5VV67 1664 aaKnown RBP34.85■■■■□ 3.17
SRM-202ENST00000459997 WDR7Q9Y4E6 1490 aa34.84■■■■□ 3.17
SRM-202ENST00000459997 MAP3K4Q9Y6R4 1608 aa34.81■■■■□ 3.16
SRM-202ENST00000459997 RANGAP1P46060 587 aaPredicted RBP34.76■■■■□ 3.16
SRM-202ENST00000459997 AEBP2Q6ZN18 517 aaPredicted RBP34.74■■■■□ 3.15
SRM-202ENST00000459997 ARID3CA6NKF2 412 aa34.69■■■■□ 3.14
SRM-202ENST00000459997 RAPGEF6Q8TEU7 1601 aa34.69■■■■□ 3.14
SRM-202ENST00000459997 TEX14Q8IWB6 1497 aa34.68■■■■□ 3.14
SRM-202ENST00000459997 ATP10BO94823 1461 aa34.66■■■■□ 3.14
SRM-202ENST00000459997 KCNH8Q96L42 1107 aa34.66■■■■□ 3.14
SRM-202ENST00000459997 FHOD3Q2V2M9 1422 aa34.65■■■■□ 3.14
SRM-202ENST00000459997 CFAP43Q8NDM7 1665 aa34.63■■■■□ 3.13
SRM-202ENST00000459997 EFCAB5A4FU69 1503 aa34.62■■■■□ 3.13
SRM-202ENST00000459997 EHMT2Q96KQ7 1210 aa34.62■■■■□ 3.13
SRM-202ENST00000459997 CD109Q6YHK3 1445 aa34.57■■■■□ 3.13
SRM-202ENST00000459997 UBTFP17480 764 aaKnown RBP34.56■■■■□ 3.12
SRM-202ENST00000459997 COL17A1Q9UMD9 1497 aaPredicted RBP34.55■■■■□ 3.12
SRM-202ENST00000459997 NUP153P49790 1475 aaKnown RBP34.54■■■■□ 3.12
SRM-202ENST00000459997 MAGI3Q5TCQ9 1506 aa34.53■■■■□ 3.12
SRM-202ENST00000459997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.49■■■■□ 3.11
SRM-202ENST00000459997 HNRNPUL2Q1KMD3 747 aaKnown RBP34.49■■■■□ 3.11
SRM-202ENST00000459997 ABCA9Q8IUA7 1624 aa34.43■■■■□ 3.1
SRM-202ENST00000459997 ARHGAP35Q9NRY4 1499 aa34.35■■■■□ 3.09
SRM-202ENST00000459997 KDM4FA0A1W2PPD8 638 aa34.32■■■■□ 3.08
SRM-202ENST00000459997 PLEKHD1A6NEE1 506 aa34.29■■■■□ 3.08
SRM-202ENST00000459997 FMN1Q68DA7 1419 aa34.29■■■■□ 3.08
SRM-202ENST00000459997 CDK13Q14004 1512 aaKnown RBP34.25■■■■□ 3.07
SRM-202ENST00000459997 ARAP3Q8WWN8 1544 aa34.25■■■■□ 3.07
SRM-202ENST00000459997 HECW1Q76N89 1606 aa34.23■■■■□ 3.07
SRM-202ENST00000459997 PHLDB1Q86UU1 1377 aa34.21■■■■□ 3.07
SRM-202ENST00000459997 ADGRL1O94910 1474 aa34.2■■■■□ 3.06
SRM-202ENST00000459997 ATP1B4Q9UN42 357 aaPredicted RBP34.19■■■■□ 3.06
SRM-202ENST00000459997 NEO1Q92859 1461 aa34.19■■■■□ 3.06
SRM-202ENST00000459997 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.15■■■■□ 3.061e-8■■□□□ 11.6
SRM-202ENST00000459997 TTC37Q6PGP7 1564 aa34.13■■■■□ 3.05
SRM-202ENST00000459997 CFAP74Q9C0B2 1584 aa34.06■■■■□ 3.04
SRM-202ENST00000459997 RAPGEF3O95398 923 aa34.05■■■■□ 3.04
SRM-202ENST00000459997 FANCAO15360 1455 aa34.04■■■■□ 3.04
SRM-202ENST00000459997 LRRIQ1Q96JM4 1722 aa34.03■■■■□ 3.04
SRM-202ENST00000459997 FRMPD1Q5SYB0 1578 aa34.02■■■■□ 3.04
SRM-202ENST00000459997 CDK11AQ9UQ88 783 aaPredicted RBP34.02■■■■□ 3.04
SRM-202ENST00000459997 PCF11O94913 1555 aaKnown RBP34■■■■□ 3.03
SRM-202ENST00000459997 AKNAQ7Z591 1439 aa33.99■■■■□ 3.03
SRM-202ENST00000459997 CLIP1P30622 1438 aa33.96■■■■□ 3.03
SRM-202ENST00000459997 CASKIN1Q8WXD9 1431 aa33.96■■■■□ 3.03
SRM-202ENST00000459997 KIF14Q15058 1648 aa33.95■■■■□ 3.03
SRM-202ENST00000459997 DENND4BO75064 1496 aaPredicted RBP33.95■■■■□ 3.02
SRM-202ENST00000459997 TROQ12816 1431 aaPredicted RBP33.94■■■■□ 3.02
SRM-202ENST00000459997 RICTORQ6R327 1708 aa33.93■■■■□ 3.02
SRM-202ENST00000459997 PLCH2O75038 1416 aa33.93■■■■□ 3.02
SRM-202ENST00000459997 MYO5CQ9NQX4 1742 aa33.92■■■■□ 3.02
SRM-202ENST00000459997 CCDC18Q5T9S5 1454 aa33.9■■■■□ 3.02
SRM-202ENST00000459997 FYCO1Q9BQS8 1478 aa33.87■■■■□ 3.01
SRM-202ENST00000459997 ARHGEF40Q8TER5 1519 aa33.84■■■■□ 3.01
SRM-202ENST00000459997 ZMYM4Q5VZL5 1548 aa33.8■■■■□ 3
SRM-202ENST00000459997 SCAPERQ9BY12 1400 aa33.79■■■■□ 3
SRM-202ENST00000459997 EFCAB2Q5VUJ9 269 aa33.78■■■■□ 3
SRM-202ENST00000459997 ARHGAP5Q13017 1502 aa33.77■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms