RNA–Protein interactions for RNA: ENST00000459963.5

NCSTN-209, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 1,246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-209ENST00000459963 ABCC10Q5T3U5 1492 aa15.98■□□□□ 0.15
NCSTN-209ENST00000459963 ILDR2Q71H61 639 aa15.98■□□□□ 0.15
NCSTN-209ENST00000459963 WDR97A6NE52 1622 aa15.97■□□□□ 0.15
NCSTN-209ENST00000459963 TOP2AP11388 1531 aaKnown RBP15.96■□□□□ 0.15
NCSTN-209ENST00000459963 SOGA1O94964 1423 aa15.94■□□□□ 0.14
NCSTN-209ENST00000459963 GRIN2BQ13224 1484 aa15.93■□□□□ 0.14
NCSTN-209ENST00000459963 DIP2BQ9P265 1576 aa15.89■□□□□ 0.13
NCSTN-209ENST00000459963 CEP170Q5SW79 1584 aa15.87■□□□□ 0.13
NCSTN-209ENST00000459963 DISP3Q9P2K9 1392 aa15.85■□□□□ 0.13
NCSTN-209ENST00000459963 MAPKBP1O60336 1514 aa15.84■□□□□ 0.13
NCSTN-209ENST00000459963 CCDC88BA6NC98 1476 aa15.8■□□□□ 0.12
NCSTN-209ENST00000459963 NPM1P06748 294 aaKnown RBP eCLIP15.8■□□□□ 0.12
NCSTN-209ENST00000459963 TSPOAP1O95153 1857 aa15.8■□□□□ 0.12
NCSTN-209ENST00000459963 SHROOM2Q13796 1616 aa15.77■□□□□ 0.12
NCSTN-209ENST00000459963 FGD5Q6ZNL6 1462 aa15.77■□□□□ 0.11
NCSTN-209ENST00000459963 CNKSR2Q8WXI2 1034 aa15.76■□□□□ 0.11
NCSTN-209ENST00000459963 PBRM1Q86U86 1689 aa15.76■□□□□ 0.11
NCSTN-209ENST00000459963 GRIN2AQ12879 1464 aa15.73■□□□□ 0.11
NCSTN-209ENST00000459963 NUP160Q12769 1436 aa15.73■□□□□ 0.11
NCSTN-209ENST00000459963 PRG4Q92954 1404 aaPredicted RBP15.67■□□□□ 0.1
NCSTN-209ENST00000459963 NCBP3Q53F19 620 aaKnown RBP15.64■□□□□ 0.09
NCSTN-209ENST00000459963 TOP2BQ02880 1626 aa15.64■□□□□ 0.09
NCSTN-209ENST00000459963 ADCY10Q96PN6 1610 aa15.63■□□□□ 0.09
NCSTN-209ENST00000459963 COL17A1Q9UMD9 1497 aaPredicted RBP15.59■□□□□ 0.09
NCSTN-209ENST00000459963 ABCA5Q8WWZ7 1642 aa15.58■□□□□ 0.09
NCSTN-209ENST00000459963 PPRC1Q5VV67 1664 aaKnown RBP15.58■□□□□ 0.08
NCSTN-209ENST00000459963 SPATA31D1Q6ZQQ2 1576 aa15.58■□□□□ 0.08
NCSTN-209ENST00000459963 JPH4Q96JJ6 628 aa15.57■□□□□ 0.08
NCSTN-209ENST00000459963 CUX1P39880 1505 aa15.57■□□□□ 0.08
NCSTN-209ENST00000459963 ADAMTS12P58397 1594 aa15.56■□□□□ 0.08
NCSTN-209ENST00000459963 HOXD11P31277 338 aaPredicted RBP15.54■□□□□ 0.08
NCSTN-209ENST00000459963 DCAF8L1A6NGE4 600 aa15.53■□□□□ 0.08
NCSTN-209ENST00000459963 CERKQ8TCT0 537 aa15.53■□□□□ 0.08
NCSTN-209ENST00000459963 RNF216Q9NWF9 866 aaPredicted RBP15.53■□□□□ 0.08
NCSTN-209ENST00000459963 ABCA10Q8WWZ4 1543 aa15.53■□□□□ 0.08
NCSTN-209ENST00000459963 GLI2P10070 1586 aa15.49■□□□□ 0.07
NCSTN-209ENST00000459963 FHAD1B1AJZ9 1412 aa15.49■□□□□ 0.07
NCSTN-209ENST00000459963 PCF11O94913 1555 aaKnown RBP15.43■□□□□ 0.06
NCSTN-209ENST00000459963 TEX14Q8IWB6 1497 aa15.41■□□□□ 0.06
NCSTN-209ENST00000459963 ASXL2Q76L83 1435 aa15.41■□□□□ 0.06
NCSTN-209ENST00000459963 PTPRMP28827 1452 aa15.4■□□□□ 0.06
NCSTN-209ENST00000459963 PLB1Q6P1J6 1458 aa15.4■□□□□ 0.06
NCSTN-209ENST00000459963 RUSC2Q8N2Y8 1516 aa15.37■□□□□ 0.05
NCSTN-209ENST00000459963 MAP3K4Q9Y6R4 1608 aa15.35■□□□□ 0.05
NCSTN-209ENST00000459963 ABCC2Q92887 1545 aa15.34■□□□□ 0.05
NCSTN-209ENST00000459963 KIF21BO75037 1637 aa15.33■□□□□ 0.04
NCSTN-209ENST00000459963 EPRSP07814 1512 aaKnown RBP15.31■□□□□ 0.04
NCSTN-209ENST00000459963 ERICH3Q5RHP9 1530 aa15.31■□□□□ 0.04
NCSTN-209ENST00000459963 NPM3O75607 178 aaKnown RBP15.3■□□□□ 0.04
NCSTN-209ENST00000459963 ADAMTSL3P82987 1691 aa15.28■□□□□ 0.04
NCSTN-209ENST00000459963 HSPA2P54652 639 aa15.28■□□□□ 0.04
NCSTN-209ENST00000459963 PTPRGP23470 1445 aa15.27■□□□□ 0.04
NCSTN-209ENST00000459963 KIAA0586Q9BVV6 1533 aa15.27■□□□□ 0.03
NCSTN-209ENST00000459963 WRNQ14191 1432 aaPredicted RBP eCLIP15.25■□□□□ 0.03
NCSTN-209ENST00000459963 CUL7Q14999 1698 aa15.24■□□□□ 0.03
NCSTN-209ENST00000459963 TTBK1Q5TCY1 1321 aaPredicted RBP15.21■□□□□ 0.03
NCSTN-209ENST00000459963 KCNA4P22459 653 aa15.2■□□□□ 0.02
NCSTN-209ENST00000459963 UHRF1BP1LA0JNW5 1464 aa15.18■□□□□ 0.02
NCSTN-209ENST00000459963 MADDQ8WXG6 1647 aa15.16■□□□□ 0.02
NCSTN-209ENST00000459963 TNIKQ9UKE5 1360 aa15.15■□□□□ 0.02
NCSTN-209ENST00000459963 MAGI3Q5TCQ9 1506 aa15.14■□□□□ 0.01
NCSTN-209ENST00000459963 BCORL1Q5H9F3 1711 aa15.13■□□□□ 0.01
NCSTN-209ENST00000459963 KDM5BQ9UGL1 1544 aa15.12■□□□□ 0.01
NCSTN-209ENST00000459963 UACAQ9BZF9 1416 aa15.12■□□□□ 0.01
NCSTN-209ENST00000459963 CD109Q6YHK3 1445 aa15.1■□□□□ 0.01
NCSTN-209ENST00000459963 CARMIL2Q6F5E8 1435 aa15.08■□□□□ 0
NCSTN-209ENST00000459963 WDR7Q9Y4E6 1490 aa15.07■□□□□ 0
NCSTN-209ENST00000459963 ZCCHC11Q5TAX3 1644 aaKnown RBP15.06■□□□□ 0
NCSTN-209ENST00000459963 RIMS1Q86UR5 1692 aaKnown RBP15.06■□□□□ 0
NCSTN-209ENST00000459963 ARID4BQ4LE39 1312 aaPredicted RBP15.06■□□□□ 0
NCSTN-209ENST00000459963 ARAP3Q8WWN8 1544 aa15.06■□□□□ 0
NCSTN-209ENST00000459963 CFAP43Q8NDM7 1665 aa15.05■□□□□ -0
NCSTN-209ENST00000459963 YEATS2Q9ULM3 1422 aa15.01□□□□□ -0.01
NCSTN-209ENST00000459963 IQSEC2Q5JU85 1478 aa15□□□□□ -0.01
NCSTN-209ENST00000459963 BIVM-ERCC5R4GMW8 1640 aa14.99□□□□□ -0.01
NCSTN-209ENST00000459963 CACNB1Q02641 598 aaPredicted RBP14.96□□□□□ -0.01
NCSTN-209ENST00000459963 KCNH8Q96L42 1107 aa14.96□□□□□ -0.01
NCSTN-209ENST00000459963 MED1Q15648 1581 aaPredicted RBP14.95□□□□□ -0.02
NCSTN-209ENST00000459963 RNF39Q9H2S5 420 aa14.95□□□□□ -0.02
NCSTN-209ENST00000459963 STRCQ7RTU9 1775 aa14.95□□□□□ -0.02
NCSTN-209ENST00000459963 RAPGEF3O95398 923 aa14.94□□□□□ -0.02
NCSTN-209ENST00000459963 LTBP4Q8N2S1 1624 aa14.94□□□□□ -0.02
NCSTN-209ENST00000459963 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.93□□□□□ -0.02
NCSTN-209ENST00000459963 PHLDB1Q86UU1 1377 aa14.91□□□□□ -0.02
NCSTN-209ENST00000459963 PTPRTO14522 1441 aa14.9□□□□□ -0.02
NCSTN-209ENST00000459963 DISP1Q96F81 1524 aa14.89□□□□□ -0.03
NCSTN-209ENST00000459963 PREX1Q8TCU6 1659 aa14.87□□□□□ -0.03
NCSTN-209ENST00000459963 POGZQ7Z3K3 1410 aa14.86□□□□□ -0.03
NCSTN-209ENST00000459963 UBAP1LF5GYI3 381 aa14.86□□□□□ -0.03
NCSTN-209ENST00000459963 IGF1RP08069 1367 aa14.85□□□□□ -0.03
NCSTN-209ENST00000459963 IQGAP2Q13576 1575 aa14.85□□□□□ -0.03
NCSTN-209ENST00000459963 FRMPD1Q5SYB0 1578 aa14.85□□□□□ -0.03
NCSTN-209ENST00000459963 ARHGEF40Q8TER5 1519 aa14.84□□□□□ -0.03
NCSTN-209ENST00000459963 TTC37Q6PGP7 1564 aa14.84□□□□□ -0.03
NCSTN-209ENST00000459963 FANCAO15360 1455 aa14.82□□□□□ -0.04
NCSTN-209ENST00000459963 C1QBPQ07021 282 aaKnown RBP14.79□□□□□ -0.04
NCSTN-209ENST00000459963 NEO1Q92859 1461 aa14.79□□□□□ -0.04
NCSTN-209ENST00000459963 FER1L4A9Z1Z3 1794 aa14.78□□□□□ -0.04
NCSTN-209ENST00000459963 UHRF1BP1Q6BDS2 1440 aa14.78□□□□□ -0.04
NCSTN-209ENST00000459963 HSPA1LP34931 641 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms