RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-223ENST00000459783 SHROOM2Q13796 1616 aa17.26■□□□□ 0.35
MRPL55-223ENST00000459783 ARAP1Q96P48 1450 aa17.24■□□□□ 0.35
MRPL55-223ENST00000459783 EEA1Q15075 1411 aa17.24■□□□□ 0.35
MRPL55-223ENST00000459783 CSRNP3Q8WYN3 585 aa17.24■□□□□ 0.35
MRPL55-223ENST00000459783 KIAA0586Q9BVV6 1533 aa17.24■□□□□ 0.35
MRPL55-223ENST00000459783 FAM9AQ8IZU1 332 aaPredicted RBP17.23■□□□□ 0.35
MRPL55-223ENST00000459783 JPH4Q96JJ6 628 aa17.19■□□□□ 0.34
MRPL55-223ENST00000459783 PRG4Q92954 1404 aaPredicted RBP17.17■□□□□ 0.34
MRPL55-223ENST00000459783 CYB5RLQ6IPT4 315 aa17.14■□□□□ 0.33
MRPL55-223ENST00000459783 IQGAP2Q13576 1575 aa17.14■□□□□ 0.33
MRPL55-223ENST00000459783 KIF21BO75037 1637 aa17.1■□□□□ 0.33
MRPL55-223ENST00000459783 DISP1Q96F81 1524 aa17.08■□□□□ 0.32
MRPL55-223ENST00000459783 UGGT2Q9NYU1 1516 aa17.08■□□□□ 0.32
MRPL55-223ENST00000459783 CTTNBP2Q8WZ74 1663 aa17.07■□□□□ 0.32
MRPL55-223ENST00000459783 EHMT2Q96KQ7 1210 aa17.02■□□□□ 0.32
MRPL55-223ENST00000459783 KIAA0556O60303 1618 aa17■□□□□ 0.31
MRPL55-223ENST00000459783 GOLGA3Q08378 1498 aa16.99■□□□□ 0.31
MRPL55-223ENST00000459783 CARMIL2Q6F5E8 1435 aa16.98■□□□□ 0.31
MRPL55-223ENST00000459783 TNIKQ9UKE5 1360 aa16.97■□□□□ 0.31
MRPL55-223ENST00000459783 PTPRGP23470 1445 aa16.96■□□□□ 0.3
MRPL55-223ENST00000459783 SAMD9Q5K651 1589 aa16.93■□□□□ 0.3
MRPL55-223ENST00000459783 TTBK1Q5TCY1 1321 aaPredicted RBP16.93■□□□□ 0.3
MRPL55-223ENST00000459783 ADCY10Q96PN6 1610 aa16.92■□□□□ 0.3
MRPL55-223ENST00000459783 UBTFP17480 764 aaKnown RBP16.9■□□□□ 0.3
MRPL55-223ENST00000459783 RANGAP1P46060 587 aaPredicted RBP16.89■□□□□ 0.29
MRPL55-223ENST00000459783 P3H3Q8IVL6 736 aa16.89■□□□□ 0.29
MRPL55-223ENST00000459783 PLB1Q6P1J6 1458 aa16.86■□□□□ 0.29
MRPL55-223ENST00000459783 FHOD3Q2V2M9 1422 aa16.85■□□□□ 0.29
MRPL55-223ENST00000459783 UACAQ9BZF9 1416 aa16.85■□□□□ 0.29
MRPL55-223ENST00000459783 UHRF1BP1LA0JNW5 1464 aa16.85■□□□□ 0.29
MRPL55-223ENST00000459783 ABCA8O94911 1581 aa16.83■□□□□ 0.28
MRPL55-223ENST00000459783 ABCC2Q92887 1545 aa16.83■□□□□ 0.28
MRPL55-223ENST00000459783 EFCAB5A4FU69 1503 aa16.82■□□□□ 0.28
MRPL55-223ENST00000459783 ARHGAP35Q9NRY4 1499 aa16.82■□□□□ 0.28
MRPL55-223ENST00000459783 TRHP20396 242 aaPredicted RBP16.79■□□□□ 0.28
MRPL55-223ENST00000459783 LOC105371045A0A1W2PR82 267 aa16.78■□□□□ 0.28
MRPL55-223ENST00000459783 KDM5BQ9UGL1 1544 aa16.78■□□□□ 0.28
MRPL55-223ENST00000459783 AEBP2Q6ZN18 517 aaPredicted RBP16.77■□□□□ 0.28
MRPL55-223ENST00000459783 MAPKBP1O60336 1514 aa16.76■□□□□ 0.27
MRPL55-223ENST00000459783 ZCCHC11Q5TAX3 1644 aaKnown RBP16.73■□□□□ 0.27
MRPL55-223ENST00000459783 RAPGEF6Q8TEU7 1601 aa16.71■□□□□ 0.27
MRPL55-223ENST00000459783 NPM1P06748 294 aaKnown RBP eCLIP16.71■□□□□ 0.27
MRPL55-223ENST00000459783 NUP153P49790 1475 aaKnown RBP16.71■□□□□ 0.27
MRPL55-223ENST00000459783 CLIP1P30622 1438 aa16.7■□□□□ 0.26
MRPL55-223ENST00000459783 ASXL2Q76L83 1435 aa16.7■□□□□ 0.26
MRPL55-223ENST00000459783 ATP10BO94823 1461 aa16.69■□□□□ 0.26
MRPL55-223ENST00000459783 ARID3CA6NKF2 412 aa16.69■□□□□ 0.26
MRPL55-223ENST00000459783 ABCC10Q5T3U5 1492 aa16.68■□□□□ 0.26
MRPL55-223ENST00000459783 DIP2BQ9P265 1576 aa16.68■□□□□ 0.26
MRPL55-223ENST00000459783 CEP162Q5TB80 1403 aa16.67■□□□□ 0.26
MRPL55-223ENST00000459783 KIF13AQ9H1H9 1805 aa16.66■□□□□ 0.26
MRPL55-223ENST00000459783 FMN1Q68DA7 1419 aa16.64■□□□□ 0.25
MRPL55-223ENST00000459783 WDR7Q9Y4E6 1490 aa16.62■□□□□ 0.25
MRPL55-223ENST00000459783 EPRSP07814 1512 aaKnown RBP16.61■□□□□ 0.25
MRPL55-223ENST00000459783 FAM69CQ0P6D2 419 aa16.61■□□□□ 0.25
MRPL55-223ENST00000459783 CDK13Q14004 1512 aaKnown RBP16.6■□□□□ 0.25
MRPL55-223ENST00000459783 PCF11O94913 1555 aaKnown RBP16.6■□□□□ 0.25
MRPL55-223ENST00000459783 GLI2P10070 1586 aa16.58■□□□□ 0.24
MRPL55-223ENST00000459783 CASKIN1Q8WXD9 1431 aa16.57■□□□□ 0.24
MRPL55-223ENST00000459783 LRRIQ1Q96JM4 1722 aa16.56■□□□□ 0.24
MRPL55-223ENST00000459783 HECW1Q76N89 1606 aa16.56■□□□□ 0.24
MRPL55-223ENST00000459783 KCNH8Q96L42 1107 aa16.52■□□□□ 0.24
MRPL55-223ENST00000459783 ATP1B4Q9UN42 357 aaPredicted RBP16.52■□□□□ 0.24
MRPL55-223ENST00000459783 FYCO1Q9BQS8 1478 aa16.52■□□□□ 0.23
MRPL55-223ENST00000459783 PPRC1Q5VV67 1664 aaKnown RBP16.52■□□□□ 0.23
MRPL55-223ENST00000459783 MAP3K4Q9Y6R4 1608 aa16.52■□□□□ 0.23
MRPL55-223ENST00000459783 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.51■□□□□ 0.23
MRPL55-223ENST00000459783 HNRNPUL2Q1KMD3 747 aaKnown RBP16.51■□□□□ 0.23
MRPL55-223ENST00000459783 MAGI3Q5TCQ9 1506 aa16.48■□□□□ 0.23
MRPL55-223ENST00000459783 ABCA9Q8IUA7 1624 aa16.46■□□□□ 0.23
MRPL55-223ENST00000459783 PLEKHD1A6NEE1 506 aa16.46■□□□□ 0.23
MRPL55-223ENST00000459783 TSPOAP1O95153 1857 aa16.46■□□□□ 0.22
MRPL55-223ENST00000459783 CCDC18Q5T9S5 1454 aa16.45■□□□□ 0.22
MRPL55-223ENST00000459783 VPS8Q8N3P4 1428 aa16.45■□□□□ 0.22
MRPL55-223ENST00000459783 CD109Q6YHK3 1445 aa16.44■□□□□ 0.22
MRPL55-223ENST00000459783 CFAP43Q8NDM7 1665 aa16.43■□□□□ 0.22
MRPL55-223ENST00000459783 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.43■□□□□ 0.22
MRPL55-223ENST00000459783 TROQ12816 1431 aaPredicted RBP16.43■□□□□ 0.22
MRPL55-223ENST00000459783 TTC37Q6PGP7 1564 aa16.43■□□□□ 0.22
MRPL55-223ENST00000459783 KIF14Q15058 1648 aa16.42■□□□□ 0.22
MRPL55-223ENST00000459783 COL17A1Q9UMD9 1497 aaPredicted RBP16.41■□□□□ 0.22
MRPL55-223ENST00000459783 CDK11AQ9UQ88 783 aaPredicted RBP16.37■□□□□ 0.21
MRPL55-223ENST00000459783 TEX14Q8IWB6 1497 aa16.36■□□□□ 0.21
MRPL55-223ENST00000459783 TIAM1Q13009 1591 aa16.34■□□□□ 0.21
MRPL55-223ENST00000459783 KDM6BO15054 1643 aa16.34■□□□□ 0.21
MRPL55-223ENST00000459783 PLCH2O75038 1416 aa16.31■□□□□ 0.2
MRPL55-223ENST00000459783 MTUS2Q5JR59 1369 aa16.29■□□□□ 0.2
MRPL55-223ENST00000459783 EHBP1L1Q8N3D4 1523 aa16.29■□□□□ 0.2
MRPL55-223ENST00000459783 FANCAO15360 1455 aa16.29■□□□□ 0.2
MRPL55-223ENST00000459783 NEO1Q92859 1461 aa16.29■□□□□ 0.2
MRPL55-223ENST00000459783 KANK4Q5T7N3 995 aaPredicted RBP16.28■□□□□ 0.2
MRPL55-223ENST00000459783 MAP3K1Q13233 1512 aa16.28■□□□□ 0.2
MRPL55-223ENST00000459783 ARAP3Q8WWN8 1544 aa16.28■□□□□ 0.2
MRPL55-223ENST00000459783 LRRC9Q6ZRR7 1453 aa16.26■□□□□ 0.19
MRPL55-223ENST00000459783 AKNAQ7Z591 1439 aa16.26■□□□□ 0.19
MRPL55-223ENST00000459783 MYO5CQ9NQX4 1742 aa16.25■□□□□ 0.19
MRPL55-223ENST00000459783 FRMPD1Q5SYB0 1578 aa16.25■□□□□ 0.19
MRPL55-223ENST00000459783 GPATCH8Q9UKJ3 1502 aaKnown RBP16.24■□□□□ 0.19
MRPL55-223ENST00000459783 PREX2Q70Z35 1606 aa16.24■□□□□ 0.19
MRPL55-223ENST00000459783 CDC42BPBQ9Y5S2 1711 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms