RNA–Protein interactions for RNA: ENST00000459726.1

RBM28-203, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-203ENST00000459726 CTTNBP2Q8WZ74 1663 aa23.06■■□□□ 1.28
RBM28-203ENST00000459726 KIAA0586Q9BVV6 1533 aa23.05■■□□□ 1.28
RBM28-203ENST00000459726 RIMBP3CA6NJZ7 1639 aa23.04■■□□□ 1.28
RBM28-203ENST00000459726 RIMBP3BA6NNM3 1639 aa23.04■■□□□ 1.28
RBM28-203ENST00000459726 RIMBP3Q9UFD9 1639 aa23.04■■□□□ 1.28
RBM28-203ENST00000459726 ARHGEF11O15085 1522 aa23.03■■□□□ 1.28
RBM28-203ENST00000459726 IQGAP2Q13576 1575 aa23.01■■□□□ 1.27
RBM28-203ENST00000459726 ERCC6L2Q5T890 1561 aa23.01■■□□□ 1.27
RBM28-203ENST00000459726 GOLGA3Q08378 1498 aa22.92■■□□□ 1.26
RBM28-203ENST00000459726 JPH4Q96JJ6 628 aa22.92■■□□□ 1.26
RBM28-203ENST00000459726 PRG4Q92954 1404 aaPredicted RBP22.9■■□□□ 1.26
RBM28-203ENST00000459726 UGGT2Q9NYU1 1516 aa22.89■■□□□ 1.26
RBM28-203ENST00000459726 EHMT2Q96KQ7 1210 aa22.89■■□□□ 1.25
RBM28-203ENST00000459726 ARAP1Q96P48 1450 aa22.89■■□□□ 1.25
RBM28-203ENST00000459726 DISP1Q96F81 1524 aa22.84■■□□□ 1.25
RBM28-203ENST00000459726 KIAA0556O60303 1618 aa22.81■■□□□ 1.24
RBM28-203ENST00000459726 SAMD9Q5K651 1589 aa22.76■■□□□ 1.23
RBM28-203ENST00000459726 UBTFP17480 764 aaKnown RBP22.76■■□□□ 1.23
RBM28-203ENST00000459726 CARMIL2Q6F5E8 1435 aa22.73■■□□□ 1.23
RBM28-203ENST00000459726 CYB5RLQ6IPT4 315 aa22.71■■□□□ 1.23
RBM28-203ENST00000459726 TNIKQ9UKE5 1360 aa22.67■■□□□ 1.22
RBM28-203ENST00000459726 LOC105371045A0A1W2PR82 267 aa22.66■■□□□ 1.22
RBM28-203ENST00000459726 RANGAP1P46060 587 aaPredicted RBP22.66■■□□□ 1.22
RBM28-203ENST00000459726 EFCAB5A4FU69 1503 aa22.65■■□□□ 1.22
RBM28-203ENST00000459726 PTPRGP23470 1445 aa22.63■■□□□ 1.21
RBM28-203ENST00000459726 ARHGAP35Q9NRY4 1499 aa22.62■■□□□ 1.21
RBM28-203ENST00000459726 ADCY10Q96PN6 1610 aa22.61■■□□□ 1.21
RBM28-203ENST00000459726 P3H3Q8IVL6 736 aa22.61■■□□□ 1.21
RBM28-203ENST00000459726 FHOD3Q2V2M9 1422 aa22.6■■□□□ 1.21
RBM28-203ENST00000459726 TTBK1Q5TCY1 1321 aaPredicted RBP22.59■■□□□ 1.21
RBM28-203ENST00000459726 ABCA8O94911 1581 aa22.55■■□□□ 1.2
RBM28-203ENST00000459726 PLB1Q6P1J6 1458 aa22.54■■□□□ 1.2
RBM28-203ENST00000459726 ABCC2Q92887 1545 aa22.52■■□□□ 1.19
RBM28-203ENST00000459726 CLIP1P30622 1438 aa22.51■■□□□ 1.19
RBM28-203ENST00000459726 UACAQ9BZF9 1416 aa22.51■■□□□ 1.19
RBM28-203ENST00000459726 CEP162Q5TB80 1403 aa22.5■■□□□ 1.19
RBM28-203ENST00000459726 UHRF1BP1LA0JNW5 1464 aa22.5■■□□□ 1.19
RBM28-203ENST00000459726 RAPGEF6Q8TEU7 1601 aa22.47■■□□□ 1.19
RBM28-203ENST00000459726 ZCCHC11Q5TAX3 1644 aaKnown RBP22.42■■□□□ 1.18
RBM28-203ENST00000459726 KDM5BQ9UGL1 1544 aa22.41■■□□□ 1.18
RBM28-203ENST00000459726 NUP153P49790 1475 aaKnown RBP22.38■■□□□ 1.17
RBM28-203ENST00000459726 FMN1Q68DA7 1419 aa22.38■■□□□ 1.17
RBM28-203ENST00000459726 PCF11O94913 1555 aaKnown RBP22.37■■□□□ 1.17
RBM28-203ENST00000459726 LRRIQ1Q96JM4 1722 aa22.37■■□□□ 1.17
RBM28-203ENST00000459726 MAPKBP1O60336 1514 aa22.36■■□□□ 1.17
RBM28-203ENST00000459726 HECW1Q76N89 1606 aa22.32■■□□□ 1.16
RBM28-203ENST00000459726 ATP10BO94823 1461 aa22.32■■□□□ 1.16
RBM28-203ENST00000459726 ARID3CA6NKF2 412 aa22.29■■□□□ 1.16
RBM28-203ENST00000459726 NPM1P06748 294 aaKnown RBP eCLIP22.28■■□□□ 1.16
RBM28-203ENST00000459726 CASKIN1Q8WXD9 1431 aa22.28■■□□□ 1.16
RBM28-203ENST00000459726 CDK13Q14004 1512 aaKnown RBP22.27■■□□□ 1.16
RBM28-203ENST00000459726 KIF13AQ9H1H9 1805 aa22.27■■□□□ 1.16
RBM28-203ENST00000459726 ASXL2Q76L83 1435 aa22.27■■□□□ 1.16
RBM28-203ENST00000459726 FYCO1Q9BQS8 1478 aa22.25■■□□□ 1.15
RBM28-203ENST00000459726 EPRSP07814 1512 aaKnown RBP22.25■■□□□ 1.15
RBM28-203ENST00000459726 DIP2BQ9P265 1576 aa22.23■■□□□ 1.15
RBM28-203ENST00000459726 VPS8Q8N3P4 1428 aa22.21■■□□□ 1.15
RBM28-203ENST00000459726 ABCC10Q5T3U5 1492 aa22.2■■□□□ 1.14
RBM28-203ENST00000459726 WDR7Q9Y4E6 1490 aa22.2■■□□□ 1.14
RBM28-203ENST00000459726 ATP1B4Q9UN42 357 aaPredicted RBP22.18■■□□□ 1.14
RBM28-203ENST00000459726 CCDC18Q5T9S5 1454 aa22.15■■□□□ 1.14
RBM28-203ENST00000459726 GLI2P10070 1586 aa22.12■■□□□ 1.13
RBM28-203ENST00000459726 MAGI3Q5TCQ9 1506 aa22.12■■□□□ 1.13
RBM28-203ENST00000459726 CFAP43Q8NDM7 1665 aa22.11■■□□□ 1.13
RBM28-203ENST00000459726 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.11■■□□□ 1.13
RBM28-203ENST00000459726 TRHP20396 242 aaPredicted RBP22.11■■□□□ 1.13
RBM28-203ENST00000459726 HNRNPUL2Q1KMD3 747 aaKnown RBP22.11■■□□□ 1.13
RBM28-203ENST00000459726 FAM69CQ0P6D2 419 aa22.08■■□□□ 1.13
RBM28-203ENST00000459726 MAP3K4Q9Y6R4 1608 aa22.08■■□□□ 1.13
RBM28-203ENST00000459726 PPRC1Q5VV67 1664 aaKnown RBP22.07■■□□□ 1.12
RBM28-203ENST00000459726 TSPOAP1O95153 1857 aa22.06■■□□□ 1.12
RBM28-203ENST00000459726 KIF14Q15058 1648 aa22.06■■□□□ 1.12
RBM28-203ENST00000459726 TIAM1Q13009 1591 aa22.05■■□□□ 1.12
RBM28-203ENST00000459726 ABCA9Q8IUA7 1624 aa22.05■■□□□ 1.12
RBM28-203ENST00000459726 KCNH8Q96L42 1107 aa22.04■■□□□ 1.12
RBM28-203ENST00000459726 TROQ12816 1431 aaPredicted RBP22.04■■□□□ 1.12
RBM28-203ENST00000459726 PLEKHD1A6NEE1 506 aa22.03■■□□□ 1.12
RBM28-203ENST00000459726 TTC37Q6PGP7 1564 aa22.02■■□□□ 1.12
RBM28-203ENST00000459726 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.01■■□□□ 1.112e-7■■■■□ 26.2
RBM28-203ENST00000459726 MAP3K1Q13233 1512 aa21.98■■□□□ 1.11
RBM28-203ENST00000459726 CDK11AQ9UQ88 783 aaPredicted RBP21.97■■□□□ 1.11
RBM28-203ENST00000459726 EHBP1L1Q8N3D4 1523 aa21.96■■□□□ 1.11
RBM28-203ENST00000459726 CD109Q6YHK3 1445 aa21.93■■□□□ 1.1
RBM28-203ENST00000459726 MYO5CQ9NQX4 1742 aa21.92■■□□□ 1.1
RBM28-203ENST00000459726 LRRC9Q6ZRR7 1453 aa21.91■■□□□ 1.1
RBM28-203ENST00000459726 MTUS2Q5JR59 1369 aa21.91■■□□□ 1.1
RBM28-203ENST00000459726 CDC42BPAQ5VT25 1732 aa21.89■■□□□ 1.1
RBM28-203ENST00000459726 KANK4Q5T7N3 995 aaPredicted RBP21.89■■□□□ 1.09
RBM28-203ENST00000459726 SUPT6HQ7KZ85 1726 aaKnown RBP21.87■■□□□ 1.09
RBM28-203ENST00000459726 CDC42BPBQ9Y5S2 1711 aa21.87■■□□□ 1.09
RBM28-203ENST00000459726 PREX2Q70Z35 1606 aa21.86■■□□□ 1.09
RBM28-203ENST00000459726 TEX14Q8IWB6 1497 aa21.83■■□□□ 1.09
RBM28-203ENST00000459726 PLCH2O75038 1416 aa21.82■■□□□ 1.08
RBM28-203ENST00000459726 NCOA2Q15596 1464 aa21.82■■□□□ 1.08
RBM28-203ENST00000459726 ARAP3Q8WWN8 1544 aa21.81■■□□□ 1.08
RBM28-203ENST00000459726 GPATCH8Q9UKJ3 1502 aaKnown RBP21.8■■□□□ 1.08
RBM28-203ENST00000459726 APLP2Q06481 763 aa21.78■■□□□ 1.08
RBM28-203ENST00000459726 CFAP74Q9C0B2 1584 aa21.78■■□□□ 1.08
RBM28-203ENST00000459726 FANCAO15360 1455 aa21.77■■□□□ 1.08
RBM28-203ENST00000459726 COL17A1Q9UMD9 1497 aaPredicted RBP21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms