RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 KIAA0586Q9BVV6 1533 aa35.05■■■■□ 3.2
VARS-218ENST00000459667 JPH4Q96JJ6 628 aa35.02■■■■□ 3.2
VARS-218ENST00000459667 RAPGEF2Q9Y4G8 1499 aa35.01■■■■□ 3.19
VARS-218ENST00000459667 PRG4Q92954 1404 aaPredicted RBP35■■■■□ 3.19
VARS-218ENST00000459667 IQGAP2Q13576 1575 aa34.86■■■■□ 3.17
VARS-218ENST00000459667 PRXQ9BXM0 1461 aa34.85■■■■□ 3.17
VARS-218ENST00000459667 CHIC1Q5VXU3 224 aa34.85■■■■□ 3.17
VARS-218ENST00000459667 EEA1Q15075 1411 aa34.81■■■■□ 3.16
VARS-218ENST00000459667 CSRNP3Q8WYN3 585 aa34.76■■■■□ 3.16
VARS-218ENST00000459667 CTTNBP2Q8WZ74 1663 aa34.73■■■■□ 3.15
VARS-218ENST00000459667 CARMIL2Q6F5E8 1435 aa34.68■■■■□ 3.14
VARS-218ENST00000459667 UGGT2Q9NYU1 1516 aa34.65■■■■□ 3.14
VARS-218ENST00000459667 FAM9AQ8IZU1 332 aaPredicted RBP34.64■■■■□ 3.14
VARS-218ENST00000459667 DISP1Q96F81 1524 aa34.6■■■■□ 3.13
VARS-218ENST00000459667 TRHP20396 242 aaPredicted RBP34.58■■■■□ 3.13
VARS-218ENST00000459667 TNIKQ9UKE5 1360 aa34.58■■■■□ 3.13
VARS-218ENST00000459667 PTPRGP23470 1445 aa34.55■■■■□ 3.12
VARS-218ENST00000459667 KIAA0556O60303 1618 aa34.54■■■■□ 3.12
VARS-218ENST00000459667 ADCY10Q96PN6 1610 aa34.52■■■■□ 3.12
VARS-218ENST00000459667 TTBK1Q5TCY1 1321 aaPredicted RBP34.51■■■■□ 3.11
VARS-218ENST00000459667 KIF21BO75037 1637 aa34.48■■■■□ 3.11
VARS-218ENST00000459667 GOLGA3Q08378 1498 aa34.45■■■■□ 3.1
VARS-218ENST00000459667 NPM1P06748 294 aaKnown RBP eCLIP34.39■■■■□ 3.1
VARS-218ENST00000459667 UACAQ9BZF9 1416 aa34.33■■■■□ 3.09
VARS-218ENST00000459667 MAPKBP1O60336 1514 aa34.31■■■■□ 3.08
VARS-218ENST00000459667 UHRF1BP1LA0JNW5 1464 aa34.31■■■■□ 3.08
VARS-218ENST00000459667 ABCC2Q92887 1545 aa34.3■■■■□ 3.08
VARS-218ENST00000459667 SAMD9Q5K651 1589 aa34.26■■■■□ 3.07
VARS-218ENST00000459667 EHMT2Q96KQ7 1210 aa34.22■■■■□ 3.07
VARS-218ENST00000459667 KIF13AQ9H1H9 1805 aa34.2■■■■□ 3.07
VARS-218ENST00000459667 P3H3Q8IVL6 736 aa34.19■■■■□ 3.06
VARS-218ENST00000459667 PLB1Q6P1J6 1458 aa34.19■■■■□ 3.06
VARS-218ENST00000459667 RANGAP1P46060 587 aaPredicted RBP34.17■■■■□ 3.06
VARS-218ENST00000459667 ABCC10Q5T3U5 1492 aa34.16■■■■□ 3.06
VARS-218ENST00000459667 UBTFP17480 764 aaKnown RBP34.16■■■■□ 3.06
VARS-218ENST00000459667 ABCA8O94911 1581 aa34.15■■■■□ 3.06
VARS-218ENST00000459667 KDM5BQ9UGL1 1544 aa34.15■■■■□ 3.06
VARS-218ENST00000459667 DIP2BQ9P265 1576 aa34.13■■■■□ 3.05
VARS-218ENST00000459667 ZCCHC11Q5TAX3 1644 aaKnown RBP34.11■■■■□ 3.05
VARS-218ENST00000459667 ASXL2Q76L83 1435 aa34.08■■■■□ 3.05
VARS-218ENST00000459667 FAM69CQ0P6D2 419 aa34.08■■■■□ 3.05
VARS-218ENST00000459667 EFCAB5A4FU69 1503 aa34.08■■■■□ 3.05
VARS-218ENST00000459667 FHOD3Q2V2M9 1422 aa34.04■■■■□ 3.04
VARS-218ENST00000459667 RAPGEF6Q8TEU7 1601 aa33.97■■■■□ 3.03
VARS-218ENST00000459667 GLI2P10070 1586 aa33.89■■■■□ 3.02
VARS-218ENST00000459667 WDR7Q9Y4E6 1490 aa33.89■■■■□ 3.02
VARS-218ENST00000459667 EPRSP07814 1512 aaKnown RBP33.88■■■■□ 3.01
VARS-218ENST00000459667 ARHGAP35Q9NRY4 1499 aa33.88■■■■□ 3.01
VARS-218ENST00000459667 ARID3CA6NKF2 412 aa33.86■■■■□ 3.01
VARS-218ENST00000459667 TSPOAP1O95153 1857 aa33.85■■■■□ 3.01
VARS-218ENST00000459667 ATP10BO94823 1461 aa33.84■■■■□ 3.01
VARS-218ENST00000459667 NUP153P49790 1475 aaKnown RBP33.82■■■■□ 3
VARS-218ENST00000459667 MAP3K4Q9Y6R4 1608 aa33.75■■■□□ 2.99
VARS-218ENST00000459667 FMN1Q68DA7 1419 aa33.75■■■□□ 2.99
VARS-218ENST00000459667 PPRC1Q5VV67 1664 aaKnown RBP33.72■■■□□ 2.99
VARS-218ENST00000459667 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.71■■■□□ 2.99
VARS-218ENST00000459667 HNRNPUL2Q1KMD3 747 aaKnown RBP33.71■■■□□ 2.99
VARS-218ENST00000459667 KCNH8Q96L42 1107 aa33.7■■■□□ 2.99
VARS-218ENST00000459667 CFAP43Q8NDM7 1665 aa33.64■■■□□ 2.98
VARS-218ENST00000459667 HECW1Q76N89 1606 aa33.64■■■□□ 2.98
VARS-218ENST00000459667 CLIP1P30622 1438 aa33.63■■■□□ 2.97
VARS-218ENST00000459667 KDM6BO15054 1643 aa33.62■■■□□ 2.97
VARS-218ENST00000459667 TEX14Q8IWB6 1497 aa33.6■■■□□ 2.97
VARS-218ENST00000459667 CDK13Q14004 1512 aaKnown RBP33.58■■■□□ 2.97
VARS-218ENST00000459667 CD109Q6YHK3 1445 aa33.58■■■□□ 2.97
VARS-218ENST00000459667 ATP1B4Q9UN42 357 aaPredicted RBP33.57■■■□□ 2.96
VARS-218ENST00000459667 ABCA9Q8IUA7 1624 aa33.53■■■□□ 2.96
VARS-218ENST00000459667 PLEKHD1A6NEE1 506 aa33.53■■■□□ 2.96
VARS-218ENST00000459667 MAGI3Q5TCQ9 1506 aa33.53■■■□□ 2.96
VARS-218ENST00000459667 PCF11O94913 1555 aaKnown RBP33.51■■■□□ 2.95
VARS-218ENST00000459667 CASKIN1Q8WXD9 1431 aa33.46■■■□□ 2.95
VARS-218ENST00000459667 CEP162Q5TB80 1403 aa33.45■■■□□ 2.95
VARS-218ENST00000459667 LRRIQ1Q96JM4 1722 aa33.45■■■□□ 2.94
VARS-218ENST00000459667 LOC105371045A0A1W2PR82 267 aa33.42■■■□□ 2.94
VARS-218ENST00000459667 FYCO1Q9BQS8 1478 aa33.4■■■□□ 2.94
VARS-218ENST00000459667 COL17A1Q9UMD9 1497 aaPredicted RBP33.38■■■□□ 2.93
VARS-218ENST00000459667 CDK11AQ9UQ88 783 aaPredicted RBP33.37■■■□□ 2.93
VARS-218ENST00000459667 CCDC18Q5T9S5 1454 aa33.37■■■□□ 2.93
VARS-218ENST00000459667 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.36■■■□□ 2.93
VARS-218ENST00000459667 TTC37Q6PGP7 1564 aa33.34■■■□□ 2.93
VARS-218ENST00000459667 TROQ12816 1431 aaPredicted RBP33.29■■■□□ 2.92
VARS-218ENST00000459667 NEO1Q92859 1461 aa33.26■■■□□ 2.92
VARS-218ENST00000459667 KIF14Q15058 1648 aa33.26■■■□□ 2.91
VARS-218ENST00000459667 PHLDB1Q86UU1 1377 aa33.24■■■□□ 2.91
VARS-218ENST00000459667 ARAP3Q8WWN8 1544 aa33.23■■■□□ 2.91
VARS-218ENST00000459667 CFAP74Q9C0B2 1584 aa33.18■■■□□ 2.9
VARS-218ENST00000459667 FANCAO15360 1455 aa33.18■■■□□ 2.9
VARS-218ENST00000459667 MYO5CQ9NQX4 1742 aa33.16■■■□□ 2.9
VARS-218ENST00000459667 PLCH2O75038 1416 aa33.14■■■□□ 2.9
VARS-218ENST00000459667 AKNAQ7Z591 1439 aa33.11■■■□□ 2.89
VARS-218ENST00000459667 VPS8Q8N3P4 1428 aa33.06■■■□□ 2.88
VARS-218ENST00000459667 FRMPD1Q5SYB0 1578 aa33.04■■■□□ 2.88
VARS-218ENST00000459667 RAPGEF3O95398 923 aa33.04■■■□□ 2.88
VARS-218ENST00000459667 DENND4BO75064 1496 aaPredicted RBP33.03■■■□□ 2.88
VARS-218ENST00000459667 ARHGAP5Q13017 1502 aa33.02■■■□□ 2.88
VARS-218ENST00000459667 ADGRL1O94910 1474 aa33■■■□□ 2.87
VARS-218ENST00000459667 MTUS2Q5JR59 1369 aa33■■■□□ 2.87
VARS-218ENST00000459667 EFCAB2Q5VUJ9 269 aa33■■■□□ 2.87
VARS-218ENST00000459667 RICTORQ6R327 1708 aa32.99■■■□□ 2.87
VARS-218ENST00000459667 PREX2Q70Z35 1606 aa32.99■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms