RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 PRXQ9BXM0 1461 aa9.14□□□□□ -0.95
RNU1-88P-201ENST00000459274 FHAD1B1AJZ9 1412 aa9.14□□□□□ -0.95
RNU1-88P-201ENST00000459274 EIF4G3O43432 1585 aaKnown RBP9.13□□□□□ -0.95
RNU1-88P-201ENST00000459274 CTTNBP2Q8WZ74 1663 aa9.13□□□□□ -0.95
RNU1-88P-201ENST00000459274 MAGI1Q96QZ7 1491 aaPredicted RBP9.12□□□□□ -0.95
RNU1-88P-201ENST00000459274 CEP162Q5TB80 1403 aa9.11□□□□□ -0.95
RNU1-88P-201ENST00000459274 CLIP1P30622 1438 aa9.1□□□□□ -0.95
RNU1-88P-201ENST00000459274 ZNF608Q9ULD9 1512 aaPredicted RBP9.1□□□□□ -0.95
RNU1-88P-201ENST00000459274 SNAPC4Q5SXM2 1469 aa9.08□□□□□ -0.96
RNU1-88P-201ENST00000459274 SYNJ2O15056 1496 aa9.07□□□□□ -0.96
RNU1-88P-201ENST00000459274 ADAMTS12P58397 1594 aa9.07□□□□□ -0.96
RNU1-88P-201ENST00000459274 ATP1B4Q9UN42 357 aaPredicted RBP9.04□□□□□ -0.96
RNU1-88P-201ENST00000459274 IQGAP2Q13576 1575 aa9.03□□□□□ -0.96
RNU1-88P-201ENST00000459274 GRIN2AQ12879 1464 aa9.02□□□□□ -0.96
RNU1-88P-201ENST00000459274 EFCAB5A4FU69 1503 aa9.02□□□□□ -0.97
RNU1-88P-201ENST00000459274 CHD1O14646 1710 aa9.01□□□□□ -0.97
RNU1-88P-201ENST00000459274 CARMIL2Q6F5E8 1435 aa9.01□□□□□ -0.97
RNU1-88P-201ENST00000459274 KIAA0586Q9BVV6 1533 aa9□□□□□ -0.97
RNU1-88P-201ENST00000459274 P3H3Q8IVL6 736 aa9□□□□□ -0.97
RNU1-88P-201ENST00000459274 FMN1Q68DA7 1419 aa8.98□□□□□ -0.97
RNU1-88P-201ENST00000459274 VPS8Q8N3P4 1428 aa8.98□□□□□ -0.97
RNU1-88P-201ENST00000459274 PLSCR2Q9NRY7 297 aa8.97□□□□□ -0.97
RNU1-88P-201ENST00000459274 OSCARQ8IYS5 282 aa8.96□□□□□ -0.98
RNU1-88P-201ENST00000459274 JPH4Q96JJ6 628 aa8.96□□□□□ -0.98
RNU1-88P-201ENST00000459274 TTBK1Q5TCY1 1321 aaPredicted RBP8.95□□□□□ -0.98
RNU1-88P-201ENST00000459274 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.94□□□□□ -0.98
RNU1-88P-201ENST00000459274 TRIM26Q12899 539 aaPredicted RBP8.94□□□□□ -0.98
RNU1-88P-201ENST00000459274 HNRNPUL2Q1KMD3 747 aaKnown RBP8.94□□□□□ -0.98
RNU1-88P-201ENST00000459274 CDK11AQ9UQ88 783 aaPredicted RBP8.94□□□□□ -0.98
RNU1-88P-201ENST00000459274 ARHGAP35Q9NRY4 1499 aa8.94□□□□□ -0.98
RNU1-88P-201ENST00000459274 CEP170Q5SW79 1584 aa8.92□□□□□ -0.98
RNU1-88P-201ENST00000459274 UGGT2Q9NYU1 1516 aa8.92□□□□□ -0.98
RNU1-88P-201ENST00000459274 NUP160Q12769 1436 aa8.92□□□□□ -0.98
RNU1-88P-201ENST00000459274 SAMD9Q5K651 1589 aa8.9□□□□□ -0.98
RNU1-88P-201ENST00000459274 FHOD3Q2V2M9 1422 aa8.9□□□□□ -0.98
RNU1-88P-201ENST00000459274 ARAP1Q96P48 1450 aa8.89□□□□□ -0.99
RNU1-88P-201ENST00000459274 PPARGC1BQ86YN6 1023 aaKnown RBP8.89□□□□□ -0.99
RNU1-88P-201ENST00000459274 FYCO1Q9BQS8 1478 aa8.89□□□□□ -0.99
RNU1-88P-201ENST00000459274 PRG4Q92954 1404 aaPredicted RBP8.88□□□□□ -0.99
RNU1-88P-201ENST00000459274 KIAA0556O60303 1618 aa8.88□□□□□ -0.99
RNU1-88P-201ENST00000459274 HECW1Q76N89 1606 aa8.88□□□□□ -0.99
RNU1-88P-201ENST00000459274 CCDC18Q5T9S5 1454 aa8.87□□□□□ -0.99
RNU1-88P-201ENST00000459274 CASKIN1Q8WXD9 1431 aa8.87□□□□□ -0.99
RNU1-88P-201ENST00000459274 NPM1P06748 294 aaKnown RBP eCLIP8.86□□□□□ -0.99
RNU1-88P-201ENST00000459274 PCGF6Q9BYE7 350 aa8.86□□□□□ -0.99
RNU1-88P-201ENST00000459274 PTPRGP23470 1445 aa8.86□□□□□ -0.99
RNU1-88P-201ENST00000459274 MTUS2Q5JR59 1369 aa8.86□□□□□ -0.99
RNU1-88P-201ENST00000459274 MAP3K1Q13233 1512 aa8.85□□□□□ -0.99
RNU1-88P-201ENST00000459274 RNF39Q9H2S5 420 aa8.85□□□□□ -0.99
RNU1-88P-201ENST00000459274 PLEKHD1A6NEE1 506 aa8.84□□□□□ -0.99
RNU1-88P-201ENST00000459274 RAPGEF6Q8TEU7 1601 aa8.83□□□□□ -1
RNU1-88P-201ENST00000459274 PCF11O94913 1555 aaKnown RBP8.83□□□□□ -1
RNU1-88P-201ENST00000459274 DISP1Q96F81 1524 aa8.83□□□□□ -1
RNU1-88P-201ENST00000459274 SHROOM2Q13796 1616 aa8.83□□□□□ -1
RNU1-88P-201ENST00000459274 TIAM1Q13009 1591 aa8.82□□□□□ -1
RNU1-88P-201ENST00000459274 CFAP43Q8NDM7 1665 aa8.81□□□□□ -1
RNU1-88P-201ENST00000459274 CLASP1Q7Z460 1538 aa8.8□□□□□ -1
RNU1-88P-201ENST00000459274 SUPT6HQ7KZ85 1726 aaKnown RBP8.8□□□□□ -1
RNU1-88P-201ENST00000459274 ARID3CA6NKF2 412 aa8.79□□□□□ -1
RNU1-88P-201ENST00000459274 LRRC9Q6ZRR7 1453 aa8.78□□□□□ -1
RNU1-88P-201ENST00000459274 EPRSP07814 1512 aaKnown RBP8.78□□□□□ -1
RNU1-88P-201ENST00000459274 UACAQ9BZF9 1416 aa8.78□□□□□ -1
RNU1-88P-201ENST00000459274 EHBP1L1Q8N3D4 1523 aa8.77□□□□□ -1.01
RNU1-88P-201ENST00000459274 FAM50AQ14320 339 aaKnown RBP8.76□□□□□ -1.01
RNU1-88P-201ENST00000459274 KANK4Q5T7N3 995 aaPredicted RBP8.76□□□□□ -1.01
RNU1-88P-201ENST00000459274 PLB1Q6P1J6 1458 aa8.75□□□□□ -1.01
RNU1-88P-201ENST00000459274 CCNB3Q8WWL7 1395 aa8.73□□□□□ -1.01
RNU1-88P-201ENST00000459274 LRRIQ1Q96JM4 1722 aa8.73□□□□□ -1.01
RNU1-88P-201ENST00000459274 ABCA8O94911 1581 aa8.73□□□□□ -1.01
RNU1-88P-201ENST00000459274 ABCC2Q92887 1545 aa8.72□□□□□ -1.01
RNU1-88P-201ENST00000459274 ITSN2Q9NZM3 1697 aa8.72□□□□□ -1.01
RNU1-88P-201ENST00000459274 NUP153P49790 1475 aaKnown RBP8.71□□□□□ -1.01
RNU1-88P-201ENST00000459274 CDK13Q14004 1512 aaKnown RBP8.71□□□□□ -1.01
RNU1-88P-201ENST00000459274 ITGAEP38570 1179 aa8.71□□□□□ -1.02
RNU1-88P-201ENST00000459274 KCNH8Q96L42 1107 aa8.71□□□□□ -1.02
RNU1-88P-201ENST00000459274 KIF14Q15058 1648 aa8.71□□□□□ -1.02
RNU1-88P-201ENST00000459274 UHRF1BP1LA0JNW5 1464 aa8.7□□□□□ -1.02
RNU1-88P-201ENST00000459274 CFDP1Q9UEE9 299 aaPredicted RBP8.7□□□□□ -1.02
RNU1-88P-201ENST00000459274 TROQ12816 1431 aaPredicted RBP8.7□□□□□ -1.02
RNU1-88P-201ENST00000459274 ACIN1Q9UKV3 1341 aaKnown RBP8.69□□□□□ -1.02
RNU1-88P-201ENST00000459274 MYOM3Q5VTT5 1437 aa8.69□□□□□ -1.02
RNU1-88P-201ENST00000459274 ATP10BO94823 1461 aa8.69□□□□□ -1.02
RNU1-88P-201ENST00000459274 NCOA2Q15596 1464 aa8.69□□□□□ -1.02
RNU1-88P-201ENST00000459274 CYB5RLQ6IPT4 315 aa8.68□□□□□ -1.02
RNU1-88P-201ENST00000459274 ZNF777Q9ULD5 760 aaPredicted RBP8.68□□□□□ -1.02
RNU1-88P-201ENST00000459274 ERCC6L2Q5T890 1561 aa8.68□□□□□ -1.02
RNU1-88P-201ENST00000459274 ARHGEF11O15085 1522 aa8.67□□□□□ -1.02
RNU1-88P-201ENST00000459274 ZCCHC11Q5TAX3 1644 aaKnown RBP8.67□□□□□ -1.02
RNU1-88P-201ENST00000459274 MIA2Q96PC5 1412 aa8.66□□□□□ -1.02
RNU1-88P-201ENST00000459274 RRBP1Q9P2E9 1410 aaKnown RBP8.66□□□□□ -1.02
RNU1-88P-201ENST00000459274 ZEB1P37275 1124 aaPredicted RBP8.66□□□□□ -1.02
RNU1-88P-201ENST00000459274 RSPH4AQ5TD94 716 aa8.66□□□□□ -1.02
RNU1-88P-201ENST00000459274 ADCY10Q96PN6 1610 aa8.65□□□□□ -1.02
RNU1-88P-201ENST00000459274 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.65□□□□□ -1.02
RNU1-88P-201ENST00000459274 TSPY4P0CV99 314 aa8.65□□□□□ -1.02
RNU1-88P-201ENST00000459274 TSPY10P0CW01 314 aa8.65□□□□□ -1.02
RNU1-88P-201ENST00000459274 CCER1Q8TC90 406 aaPredicted RBP8.65□□□□□ -1.02
RNU1-88P-201ENST00000459274 MYO5CQ9NQX4 1742 aa8.65□□□□□ -1.03
RNU1-88P-201ENST00000459274 KDM5BQ9UGL1 1544 aa8.64□□□□□ -1.03
RNU1-88P-201ENST00000459274 FGD6Q6ZV73 1430 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms