RNA–Protein interactions for RNA: ENST00000457463.1

CNOT3-205, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-205ENST00000457463 PRXQ9BXM0 1461 aa20.45■□□□□ 0.86
CNOT3-205ENST00000457463 ERCC6L2Q5T890 1561 aa20.45■□□□□ 0.86
CNOT3-205ENST00000457463 CYB5RLQ6IPT4 315 aa20.43■□□□□ 0.86
CNOT3-205ENST00000457463 JPH4Q96JJ6 628 aa20.43■□□□□ 0.86
CNOT3-205ENST00000457463 ARAP1Q96P48 1450 aa20.43■□□□□ 0.86
CNOT3-205ENST00000457463 KIAA0586Q9BVV6 1533 aa20.42■□□□□ 0.86
CNOT3-205ENST00000457463 SHROOM2Q13796 1616 aa20.41■□□□□ 0.86
CNOT3-205ENST00000457463 EEA1Q15075 1411 aa20.39■□□□□ 0.85
CNOT3-205ENST00000457463 PRG4Q92954 1404 aaPredicted RBP20.37■□□□□ 0.85
CNOT3-205ENST00000457463 IQGAP2Q13576 1575 aa20.29■□□□□ 0.84
CNOT3-205ENST00000457463 EHMT2Q96KQ7 1210 aa20.29■□□□□ 0.84
CNOT3-205ENST00000457463 CTTNBP2Q8WZ74 1663 aa20.22■□□□□ 0.83
CNOT3-205ENST00000457463 KIF21BO75037 1637 aa20.21■□□□□ 0.83
CNOT3-205ENST00000457463 DISP1Q96F81 1524 aa20.21■□□□□ 0.83
CNOT3-205ENST00000457463 TTBK1Q5TCY1 1321 aaPredicted RBP20.21■□□□□ 0.83
CNOT3-205ENST00000457463 UGGT2Q9NYU1 1516 aa20.2■□□□□ 0.82
CNOT3-205ENST00000457463 CARMIL2Q6F5E8 1435 aa20.16■□□□□ 0.82
CNOT3-205ENST00000457463 RANGAP1P46060 587 aaPredicted RBP20.14■□□□□ 0.81
CNOT3-205ENST00000457463 TNIKQ9UKE5 1360 aa20.13■□□□□ 0.81
CNOT3-205ENST00000457463 KIAA0556O60303 1618 aa20.13■□□□□ 0.81
CNOT3-205ENST00000457463 GOLGA3Q08378 1498 aa20.12■□□□□ 0.81
CNOT3-205ENST00000457463 PTPRGP23470 1445 aa20.12■□□□□ 0.81
CNOT3-205ENST00000457463 UBTFP17480 764 aaKnown RBP20.11■□□□□ 0.81
CNOT3-205ENST00000457463 P3H3Q8IVL6 736 aa20.1■□□□□ 0.81
CNOT3-205ENST00000457463 ADCY10Q96PN6 1610 aa20.03■□□□□ 0.8
CNOT3-205ENST00000457463 SAMD9Q5K651 1589 aa20.01■□□□□ 0.79
CNOT3-205ENST00000457463 UACAQ9BZF9 1416 aa19.99■□□□□ 0.79
CNOT3-205ENST00000457463 PLB1Q6P1J6 1458 aa19.98■□□□□ 0.79
CNOT3-205ENST00000457463 FHOD3Q2V2M9 1422 aa19.97■□□□□ 0.79
CNOT3-205ENST00000457463 TRHP20396 242 aaPredicted RBP19.96■□□□□ 0.79
CNOT3-205ENST00000457463 UHRF1BP1LA0JNW5 1464 aa19.93■□□□□ 0.78
CNOT3-205ENST00000457463 ABCC2Q92887 1545 aa19.93■□□□□ 0.78
CNOT3-205ENST00000457463 LOC105371045A0A1W2PR82 267 aa19.93■□□□□ 0.78
CNOT3-205ENST00000457463 NPM1P06748 294 aaKnown RBP eCLIP19.93■□□□□ 0.78
CNOT3-205ENST00000457463 ABCA8O94911 1581 aa19.91■□□□□ 0.78
CNOT3-205ENST00000457463 ARHGAP35Q9NRY4 1499 aa19.91■□□□□ 0.78
CNOT3-205ENST00000457463 EFCAB5A4FU69 1503 aa19.9■□□□□ 0.78
CNOT3-205ENST00000457463 ARID3CA6NKF2 412 aa19.88■□□□□ 0.77
CNOT3-205ENST00000457463 KDM5BQ9UGL1 1544 aa19.86■□□□□ 0.77
CNOT3-205ENST00000457463 MAPKBP1O60336 1514 aa19.85■□□□□ 0.77
CNOT3-205ENST00000457463 ZCCHC11Q5TAX3 1644 aaKnown RBP19.82■□□□□ 0.76
CNOT3-205ENST00000457463 ASXL2Q76L83 1435 aa19.81■□□□□ 0.76
CNOT3-205ENST00000457463 RAPGEF6Q8TEU7 1601 aa19.8■□□□□ 0.76
CNOT3-205ENST00000457463 CLIP1P30622 1438 aa19.79■□□□□ 0.76
CNOT3-205ENST00000457463 ABCC10Q5T3U5 1492 aa19.79■□□□□ 0.76
CNOT3-205ENST00000457463 FAM69CQ0P6D2 419 aa19.78■□□□□ 0.76
CNOT3-205ENST00000457463 ATP10BO94823 1461 aa19.78■□□□□ 0.76
CNOT3-205ENST00000457463 NUP153P49790 1475 aaKnown RBP19.78■□□□□ 0.76
CNOT3-205ENST00000457463 DIP2BQ9P265 1576 aa19.75■□□□□ 0.75
CNOT3-205ENST00000457463 KIF13AQ9H1H9 1805 aa19.74■□□□□ 0.75
CNOT3-205ENST00000457463 CEP162Q5TB80 1403 aa19.73■□□□□ 0.75
CNOT3-205ENST00000457463 FMN1Q68DA7 1419 aa19.72■□□□□ 0.75
CNOT3-205ENST00000457463 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.71■□□□□ 0.75
CNOT3-205ENST00000457463 HNRNPUL2Q1KMD3 747 aaKnown RBP19.71■□□□□ 0.75
CNOT3-205ENST00000457463 ATP1B4Q9UN42 357 aaPredicted RBP19.71■□□□□ 0.75
CNOT3-205ENST00000457463 WDR7Q9Y4E6 1490 aa19.69■□□□□ 0.74
CNOT3-205ENST00000457463 EPRSP07814 1512 aaKnown RBP19.69■□□□□ 0.74
CNOT3-205ENST00000457463 KCNH8Q96L42 1107 aa19.68■□□□□ 0.74
CNOT3-205ENST00000457463 CDK13Q14004 1512 aaKnown RBP19.66■□□□□ 0.74
CNOT3-205ENST00000457463 PCF11O94913 1555 aaKnown RBP19.63■□□□□ 0.73
CNOT3-205ENST00000457463 GLI2P10070 1586 aa19.62■□□□□ 0.73
CNOT3-205ENST00000457463 CASKIN1Q8WXD9 1431 aa19.62■□□□□ 0.73
CNOT3-205ENST00000457463 HECW1Q76N89 1606 aa19.62■□□□□ 0.73
CNOT3-205ENST00000457463 LRRIQ1Q96JM4 1722 aa19.59■□□□□ 0.73
CNOT3-205ENST00000457463 PLEKHD1A6NEE1 506 aa19.58■□□□□ 0.72
CNOT3-205ENST00000457463 TSPOAP1O95153 1857 aa19.58■□□□□ 0.72
CNOT3-205ENST00000457463 MAP3K4Q9Y6R4 1608 aa19.55■□□□□ 0.72
CNOT3-205ENST00000457463 PPRC1Q5VV67 1664 aaKnown RBP19.55■□□□□ 0.72
CNOT3-205ENST00000457463 FYCO1Q9BQS8 1478 aa19.54■□□□□ 0.72
CNOT3-205ENST00000457463 CD109Q6YHK3 1445 aa19.52■□□□□ 0.72
CNOT3-205ENST00000457463 MAGI3Q5TCQ9 1506 aa19.49■□□□□ 0.71
CNOT3-205ENST00000457463 CCDC18Q5T9S5 1454 aa19.48■□□□□ 0.71
CNOT3-205ENST00000457463 ABCA9Q8IUA7 1624 aa19.47■□□□□ 0.71
CNOT3-205ENST00000457463 CFAP43Q8NDM7 1665 aa19.47■□□□□ 0.71
CNOT3-205ENST00000457463 CDK11AQ9UQ88 783 aaPredicted RBP19.47■□□□□ 0.71
CNOT3-205ENST00000457463 VPS8Q8N3P4 1428 aa19.47■□□□□ 0.71
CNOT3-205ENST00000457463 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.46■□□□□ 0.71
CNOT3-205ENST00000457463 TROQ12816 1431 aaPredicted RBP19.46■□□□□ 0.71
CNOT3-205ENST00000457463 KIF14Q15058 1648 aa19.44■□□□□ 0.7
CNOT3-205ENST00000457463 COL17A1Q9UMD9 1497 aaPredicted RBP19.44■□□□□ 0.7
CNOT3-205ENST00000457463 TTC37Q6PGP7 1564 aa19.44■□□□□ 0.7
CNOT3-205ENST00000457463 TEX14Q8IWB6 1497 aa19.41■□□□□ 0.7
CNOT3-205ENST00000457463 KDM6BO15054 1643 aa19.39■□□□□ 0.69
CNOT3-205ENST00000457463 PLCH2O75038 1416 aa19.34■□□□□ 0.69
CNOT3-205ENST00000457463 MTUS2Q5JR59 1369 aa19.33■□□□□ 0.69
CNOT3-205ENST00000457463 TIAM1Q13009 1591 aa19.32■□□□□ 0.68
CNOT3-205ENST00000457463 KANK4Q5T7N3 995 aaPredicted RBP19.32■□□□□ 0.68
CNOT3-205ENST00000457463 FANCAO15360 1455 aa19.31■□□□□ 0.68
CNOT3-205ENST00000457463 NEO1Q92859 1461 aa19.3■□□□□ 0.68
CNOT3-205ENST00000457463 AKNAQ7Z591 1439 aa19.29■□□□□ 0.68
CNOT3-205ENST00000457463 RAPGEF3O95398 923 aa19.28■□□□□ 0.68
CNOT3-205ENST00000457463 EHBP1L1Q8N3D4 1523 aa19.28■□□□□ 0.68
CNOT3-205ENST00000457463 ARAP3Q8WWN8 1544 aa19.27■□□□□ 0.68
CNOT3-205ENST00000457463 MYO5CQ9NQX4 1742 aa19.26■□□□□ 0.67
CNOT3-205ENST00000457463 LRRC9Q6ZRR7 1453 aa19.26■□□□□ 0.67
CNOT3-205ENST00000457463 GPATCH8Q9UKJ3 1502 aaKnown RBP19.25■□□□□ 0.67
CNOT3-205ENST00000457463 PHLDB1Q86UU1 1377 aa19.25■□□□□ 0.67
CNOT3-205ENST00000457463 EFCAB2Q5VUJ9 269 aa19.25■□□□□ 0.67
CNOT3-205ENST00000457463 ARHGAP5Q13017 1502 aa19.25■□□□□ 0.67
CNOT3-205ENST00000457463 CDC42BPBQ9Y5S2 1711 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms