RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 RIMBP3BA6NNM3 1639 aa16.96■□□□□ 0.31
RFX3-210ENST00000457373 RIMBP3Q9UFD9 1639 aa16.96■□□□□ 0.31
RFX3-210ENST00000457373 CEP170Q5SW79 1584 aa16.95■□□□□ 0.3
RFX3-210ENST00000457373 CARMIL1Q5VZK9 1371 aa16.95■□□□□ 0.3
RFX3-210ENST00000457373 ARHGEF11O15085 1522 aa16.94■□□□□ 0.3
RFX3-210ENST00000457373 NUP160Q12769 1436 aa16.93■□□□□ 0.3
RFX3-210ENST00000457373 PPP4R3CPQ6ZMV5 832 aa16.86■□□□□ 0.29
RFX3-210ENST00000457373 FAM9AQ8IZU1 332 aaPredicted RBP16.86■□□□□ 0.29
RFX3-210ENST00000457373 CYB5RLQ6IPT4 315 aa16.85■□□□□ 0.29
RFX3-210ENST00000457373 RAPGEF2Q9Y4G8 1499 aa16.85■□□□□ 0.29
RFX3-210ENST00000457373 CSRNP3Q8WYN3 585 aa16.83■□□□□ 0.28
RFX3-210ENST00000457373 JPH4Q96JJ6 628 aa16.82■□□□□ 0.28
RFX3-210ENST00000457373 SHROOM2Q13796 1616 aa16.81■□□□□ 0.28
RFX3-210ENST00000457373 ARAP1Q96P48 1450 aa16.8■□□□□ 0.28
RFX3-210ENST00000457373 ERCC6L2Q5T890 1561 aa16.8■□□□□ 0.28
RFX3-210ENST00000457373 KIAA0586Q9BVV6 1533 aa16.8■□□□□ 0.28
RFX3-210ENST00000457373 EEA1Q15075 1411 aa16.79■□□□□ 0.28
RFX3-210ENST00000457373 SLC4A1APQ9BWU0 796 aaKnown RBP16.78■□□□□ 0.28
RFX3-210ENST00000457373 PRG4Q92954 1404 aaPredicted RBP16.77■□□□□ 0.27
RFX3-210ENST00000457373 PRXQ9BXM0 1461 aa16.76■□□□□ 0.27
RFX3-210ENST00000457373 PIAS4Q8N2W9 510 aaPredicted RBP16.73■□□□□ 0.27
RFX3-210ENST00000457373 IQGAP2Q13576 1575 aa16.72■□□□□ 0.27
RFX3-210ENST00000457373 CTTNBP2Q8WZ74 1663 aa16.71■□□□□ 0.27
RFX3-210ENST00000457373 TTBK1Q5TCY1 1321 aaPredicted RBP16.66■□□□□ 0.26
RFX3-210ENST00000457373 CARMIL2Q6F5E8 1435 aa16.64■□□□□ 0.25
RFX3-210ENST00000457373 KIF21BO75037 1637 aa16.63■□□□□ 0.25
RFX3-210ENST00000457373 UGGT2Q9NYU1 1516 aa16.61■□□□□ 0.25
RFX3-210ENST00000457373 NCBP3Q53F19 620 aaKnown RBP16.6■□□□□ 0.25
RFX3-210ENST00000457373 DISP1Q96F81 1524 aa16.6■□□□□ 0.25
RFX3-210ENST00000457373 RANGAP1P46060 587 aaPredicted RBP16.58■□□□□ 0.24
RFX3-210ENST00000457373 TNIKQ9UKE5 1360 aa16.58■□□□□ 0.24
RFX3-210ENST00000457373 PTPRGP23470 1445 aa16.58■□□□□ 0.24
RFX3-210ENST00000457373 UBTFP17480 764 aaKnown RBP16.57■□□□□ 0.24
RFX3-210ENST00000457373 KIAA0556O60303 1618 aa16.56■□□□□ 0.24
RFX3-210ENST00000457373 GOLGA3Q08378 1498 aa16.54■□□□□ 0.24
RFX3-210ENST00000457373 P3H3Q8IVL6 736 aa16.54■□□□□ 0.24
RFX3-210ENST00000457373 TRHP20396 242 aaPredicted RBP16.52■□□□□ 0.24
RFX3-210ENST00000457373 NPM1P06748 294 aaKnown RBP eCLIP16.51■□□□□ 0.23
RFX3-210ENST00000457373 ADCY10Q96PN6 1610 aa16.49■□□□□ 0.23
RFX3-210ENST00000457373 NPM3O75607 178 aaKnown RBP16.46■□□□□ 0.23
RFX3-210ENST00000457373 UACAQ9BZF9 1416 aa16.45■□□□□ 0.22
RFX3-210ENST00000457373 SAMD9Q5K651 1589 aa16.45■□□□□ 0.22
RFX3-210ENST00000457373 ABCC2Q92887 1545 aa16.41■□□□□ 0.22
RFX3-210ENST00000457373 UHRF1BP1LA0JNW5 1464 aa16.41■□□□□ 0.22
RFX3-210ENST00000457373 PLB1Q6P1J6 1458 aa16.41■□□□□ 0.22
RFX3-210ENST00000457373 FHOD3Q2V2M9 1422 aa16.4■□□□□ 0.22
RFX3-210ENST00000457373 EFCAB5A4FU69 1503 aa16.38■□□□□ 0.21
RFX3-210ENST00000457373 ABCA8O94911 1581 aa16.37■□□□□ 0.21
RFX3-210ENST00000457373 MAPKBP1O60336 1514 aa16.35■□□□□ 0.21
RFX3-210ENST00000457373 ZCCHC11Q5TAX3 1644 aaKnown RBP16.34■□□□□ 0.21
RFX3-210ENST00000457373 ARID3CA6NKF2 412 aa16.34■□□□□ 0.21
RFX3-210ENST00000457373 KDM5BQ9UGL1 1544 aa16.34■□□□□ 0.21
RFX3-210ENST00000457373 ARHGAP35Q9NRY4 1499 aa16.33■□□□□ 0.2
RFX3-210ENST00000457373 KIF13AQ9H1H9 1805 aa16.33■□□□□ 0.2
RFX3-210ENST00000457373 LOC105371045A0A1W2PR82 267 aa16.32■□□□□ 0.2
RFX3-210ENST00000457373 FAM69CQ0P6D2 419 aa16.32■□□□□ 0.2
RFX3-210ENST00000457373 RAPGEF6Q8TEU7 1601 aa16.32■□□□□ 0.2
RFX3-210ENST00000457373 ASXL2Q76L83 1435 aa16.3■□□□□ 0.2
RFX3-210ENST00000457373 ABCC10Q5T3U5 1492 aa16.29■□□□□ 0.2
RFX3-210ENST00000457373 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.28■□□□□ 0.2
RFX3-210ENST00000457373 HNRNPUL2Q1KMD3 747 aaKnown RBP16.28■□□□□ 0.2
RFX3-210ENST00000457373 DIP2BQ9P265 1576 aa16.27■□□□□ 0.2
RFX3-210ENST00000457373 ATP1B4Q9UN42 357 aaPredicted RBP16.27■□□□□ 0.2
RFX3-210ENST00000457373 CLIP1P30622 1438 aa16.26■□□□□ 0.19
RFX3-210ENST00000457373 ATP10BO94823 1461 aa16.25■□□□□ 0.19
RFX3-210ENST00000457373 FMN1Q68DA7 1419 aa16.24■□□□□ 0.19
RFX3-210ENST00000457373 TSPOAP1O95153 1857 aa16.23■□□□□ 0.19
RFX3-210ENST00000457373 KCNH8Q96L42 1107 aa16.23■□□□□ 0.19
RFX3-210ENST00000457373 NUP153P49790 1475 aaKnown RBP16.22■□□□□ 0.19
RFX3-210ENST00000457373 WDR7Q9Y4E6 1490 aa16.21■□□□□ 0.19
RFX3-210ENST00000457373 EPRSP07814 1512 aaKnown RBP16.2■□□□□ 0.18
RFX3-210ENST00000457373 CEP162Q5TB80 1403 aa16.19■□□□□ 0.18
RFX3-210ENST00000457373 GLI2P10070 1586 aa16.18■□□□□ 0.18
RFX3-210ENST00000457373 ZBTB22O15209 634 aa16.18■□□□□ 0.18
RFX3-210ENST00000457373 HECW1Q76N89 1606 aa16.18■□□□□ 0.18
RFX3-210ENST00000457373 CNKSR2Q8WXI2 1034 aa16.17■□□□□ 0.18
RFX3-210ENST00000457373 CDK13Q14004 1512 aaKnown RBP16.16■□□□□ 0.18
RFX3-210ENST00000457373 PLEKHD1A6NEE1 506 aa16.16■□□□□ 0.18
RFX3-210ENST00000457373 PCF11O94913 1555 aaKnown RBP16.13■□□□□ 0.17
RFX3-210ENST00000457373 LRRIQ1Q96JM4 1722 aa16.13■□□□□ 0.17
RFX3-210ENST00000457373 MAP3K4Q9Y6R4 1608 aa16.12■□□□□ 0.17
RFX3-210ENST00000457373 CASKIN1Q8WXD9 1431 aa16.11■□□□□ 0.17
RFX3-210ENST00000457373 PPRC1Q5VV67 1664 aaKnown RBP16.1■□□□□ 0.17
RFX3-210ENST00000457373 CFAP43Q8NDM7 1665 aa16.1■□□□□ 0.17
RFX3-210ENST00000457373 CD109Q6YHK3 1445 aa16.09■□□□□ 0.17
RFX3-210ENST00000457373 CDK11AQ9UQ88 783 aaPredicted RBP16.08■□□□□ 0.16
RFX3-210ENST00000457373 FYCO1Q9BQS8 1478 aa16.07■□□□□ 0.16
RFX3-210ENST00000457373 ABCA9Q8IUA7 1624 aa16.05■□□□□ 0.16
RFX3-210ENST00000457373 CCDC18Q5T9S5 1454 aa16.04■□□□□ 0.16
RFX3-210ENST00000457373 TEX14Q8IWB6 1497 aa16.04■□□□□ 0.16
RFX3-210ENST00000457373 KDM6BO15054 1643 aa16.03■□□□□ 0.16
RFX3-210ENST00000457373 MAGI3Q5TCQ9 1506 aa16.02■□□□□ 0.15
RFX3-210ENST00000457373 SCAF1Q9H7N4 1312 aaKnown RBP16.01■□□□□ 0.15
RFX3-210ENST00000457373 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.01■□□□□ 0.15
RFX3-210ENST00000457373 TROQ12816 1431 aaPredicted RBP16■□□□□ 0.15
RFX3-210ENST00000457373 KIF14Q15058 1648 aa15.98■□□□□ 0.15
RFX3-210ENST00000457373 TTC37Q6PGP7 1564 aa15.98■□□□□ 0.15
RFX3-210ENST00000457373 VPS8Q8N3P4 1428 aa15.98■□□□□ 0.15
RFX3-210ENST00000457373 COL17A1Q9UMD9 1497 aaPredicted RBP15.95■□□□□ 0.14
RFX3-210ENST00000457373 MTUS2Q5JR59 1369 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms