RNA–Protein interactions for RNA: ENST00000457226.2

SMARCA2-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-216ENST00000457226 CUL7Q14999 1698 aa23.24■■□□□ 1.31
SMARCA2-216ENST00000457226 RUSC2Q8N2Y8 1516 aa23.22■■□□□ 1.31
SMARCA2-216ENST00000457226 KIAA0586Q9BVV6 1533 aa23.18■■□□□ 1.3
SMARCA2-216ENST00000457226 CARMIL1Q5VZK9 1371 aa23.13■■□□□ 1.29
SMARCA2-216ENST00000457226 NPM1P06748 294 aaKnown RBP eCLIP23.04■■□□□ 1.28
SMARCA2-216ENST00000457226 CARMIL2Q6F5E8 1435 aa22.99■■□□□ 1.27
SMARCA2-216ENST00000457226 IQGAP2Q13576 1575 aa22.94■■□□□ 1.26
SMARCA2-216ENST00000457226 RAPGEF2Q9Y4G8 1499 aa22.94■■□□□ 1.26
SMARCA2-216ENST00000457226 MAPKBP1O60336 1514 aa22.93■■□□□ 1.26
SMARCA2-216ENST00000457226 PTPRGP23470 1445 aa22.92■■□□□ 1.26
SMARCA2-216ENST00000457226 TNIKQ9UKE5 1360 aa22.9■■□□□ 1.26
SMARCA2-216ENST00000457226 ADCY10Q96PN6 1610 aa22.9■■□□□ 1.26
SMARCA2-216ENST00000457226 ABCC10Q5T3U5 1492 aa22.88■■□□□ 1.25
SMARCA2-216ENST00000457226 FAM69CQ0P6D2 419 aa22.84■■□□□ 1.25
SMARCA2-216ENST00000457226 KIF13AQ9H1H9 1805 aa22.82■■□□□ 1.24
SMARCA2-216ENST00000457226 UGGT2Q9NYU1 1516 aa22.81■■□□□ 1.24
SMARCA2-216ENST00000457226 ABCC2Q92887 1545 aa22.78■■□□□ 1.24
SMARCA2-216ENST00000457226 DISP1Q96F81 1524 aa22.78■■□□□ 1.24
SMARCA2-216ENST00000457226 DIP2BQ9P265 1576 aa22.78■■□□□ 1.24
SMARCA2-216ENST00000457226 UHRF1BP1LA0JNW5 1464 aa22.78■■□□□ 1.24
SMARCA2-216ENST00000457226 TTBK1Q5TCY1 1321 aaPredicted RBP22.78■■□□□ 1.24
SMARCA2-216ENST00000457226 UACAQ9BZF9 1416 aa22.75■■□□□ 1.23
SMARCA2-216ENST00000457226 PRXQ9BXM0 1461 aa22.73■■□□□ 1.23
SMARCA2-216ENST00000457226 PLB1Q6P1J6 1458 aa22.72■■□□□ 1.23
SMARCA2-216ENST00000457226 GOLGA3Q08378 1498 aa22.71■■□□□ 1.23
SMARCA2-216ENST00000457226 KIAA0556O60303 1618 aa22.71■■□□□ 1.23
SMARCA2-216ENST00000457226 CTTNBP2Q8WZ74 1663 aa22.68■■□□□ 1.22
SMARCA2-216ENST00000457226 AEBP2Q6ZN18 517 aaPredicted RBP22.68■■□□□ 1.22
SMARCA2-216ENST00000457226 ASXL2Q76L83 1435 aa22.66■■□□□ 1.22
SMARCA2-216ENST00000457226 KDM5BQ9UGL1 1544 aa22.65■■□□□ 1.22
SMARCA2-216ENST00000457226 FAM9AQ8IZU1 332 aaPredicted RBP22.63■■□□□ 1.21
SMARCA2-216ENST00000457226 GLI2P10070 1586 aa22.61■■□□□ 1.21
SMARCA2-216ENST00000457226 EEA1Q15075 1411 aa22.61■■□□□ 1.21
SMARCA2-216ENST00000457226 CSRNP3Q8WYN3 585 aa22.6■■□□□ 1.21
SMARCA2-216ENST00000457226 KDM6BO15054 1643 aa22.57■■□□□ 1.2
SMARCA2-216ENST00000457226 ZCCHC11Q5TAX3 1644 aaKnown RBP22.54■■□□□ 1.2
SMARCA2-216ENST00000457226 EPRSP07814 1512 aaKnown RBP22.52■■□□□ 1.2
SMARCA2-216ENST00000457226 TSPOAP1O95153 1857 aa22.5■■□□□ 1.19
SMARCA2-216ENST00000457226 WDR7Q9Y4E6 1490 aa22.49■■□□□ 1.19
SMARCA2-216ENST00000457226 ABCA8O94911 1581 aa22.49■■□□□ 1.19
SMARCA2-216ENST00000457226 TEX14Q8IWB6 1497 aa22.48■■□□□ 1.19
SMARCA2-216ENST00000457226 MAP3K4Q9Y6R4 1608 aa22.45■■□□□ 1.18
SMARCA2-216ENST00000457226 PPRC1Q5VV67 1664 aaKnown RBP22.41■■□□□ 1.18
SMARCA2-216ENST00000457226 SAMD9Q5K651 1589 aa22.39■■□□□ 1.18
SMARCA2-216ENST00000457226 P3H3Q8IVL6 736 aa22.37■■□□□ 1.17
SMARCA2-216ENST00000457226 CD109Q6YHK3 1445 aa22.34■■□□□ 1.17
SMARCA2-216ENST00000457226 KCNH8Q96L42 1107 aa22.34■■□□□ 1.17
SMARCA2-216ENST00000457226 MAGI3Q5TCQ9 1506 aa22.33■■□□□ 1.17
SMARCA2-216ENST00000457226 CFAP43Q8NDM7 1665 aa22.33■■□□□ 1.16
SMARCA2-216ENST00000457226 KIF21BO75037 1637 aa22.32■■□□□ 1.16
SMARCA2-216ENST00000457226 ATP10BO94823 1461 aa22.31■■□□□ 1.16
SMARCA2-216ENST00000457226 RAPGEF6Q8TEU7 1601 aa22.28■■□□□ 1.16
SMARCA2-216ENST00000457226 EFCAB5A4FU69 1503 aa22.27■■□□□ 1.16
SMARCA2-216ENST00000457226 COL17A1Q9UMD9 1497 aaPredicted RBP22.27■■□□□ 1.16
SMARCA2-216ENST00000457226 ARID3CA6NKF2 412 aa22.24■■□□□ 1.15
SMARCA2-216ENST00000457226 CHIC1Q5VXU3 224 aa22.24■■□□□ 1.15
SMARCA2-216ENST00000457226 KDM4FA0A1W2PPD8 638 aa22.23■■□□□ 1.15
SMARCA2-216ENST00000457226 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.23■■□□□ 1.15
SMARCA2-216ENST00000457226 RANGAP1P46060 587 aaPredicted RBP22.23■■□□□ 1.15
SMARCA2-216ENST00000457226 HNRNPUL2Q1KMD3 747 aaKnown RBP22.23■■□□□ 1.15
SMARCA2-216ENST00000457226 PHLDB1Q86UU1 1377 aa22.22■■□□□ 1.15
SMARCA2-216ENST00000457226 FHOD3Q2V2M9 1422 aa22.22■■□□□ 1.15
SMARCA2-216ENST00000457226 NUP153P49790 1475 aaKnown RBP22.2■■□□□ 1.14
SMARCA2-216ENST00000457226 ABCA9Q8IUA7 1624 aa22.18■■□□□ 1.14
SMARCA2-216ENST00000457226 UBTFP17480 764 aaKnown RBP22.17■■□□□ 1.14
SMARCA2-216ENST00000457226 ARAP3Q8WWN8 1544 aa22.16■■□□□ 1.14
SMARCA2-216ENST00000457226 PLEKHD1A6NEE1 506 aa22.14■■□□□ 1.13
SMARCA2-216ENST00000457226 ADGRL1O94910 1474 aa22.14■■□□□ 1.13
SMARCA2-216ENST00000457226 NEO1Q92859 1461 aa22.11■■□□□ 1.13
SMARCA2-216ENST00000457226 FMN1Q68DA7 1419 aa22.09■■□□□ 1.13
SMARCA2-216ENST00000457226 EHMT2Q96KQ7 1210 aa22.02■■□□□ 1.12
SMARCA2-216ENST00000457226 ARHGAP35Q9NRY4 1499 aa22.01■■□□□ 1.11
SMARCA2-216ENST00000457226 CDK11AQ9UQ88 783 aaPredicted RBP22■■□□□ 1.11
SMARCA2-216ENST00000457226 HECW1Q76N89 1606 aa21.99■■□□□ 1.11
SMARCA2-216ENST00000457226 CFAP74Q9C0B2 1584 aa21.98■■□□□ 1.11
SMARCA2-216ENST00000457226 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.96■■□□□ 1.11
SMARCA2-216ENST00000457226 RAPGEF3O95398 923 aa21.96■■□□□ 1.11
SMARCA2-216ENST00000457226 ATP1B4Q9UN42 357 aaPredicted RBP21.96■■□□□ 1.11
SMARCA2-216ENST00000457226 FANCAO15360 1455 aa21.96■■□□□ 1.11
SMARCA2-216ENST00000457226 CDK13Q14004 1512 aaKnown RBP21.95■■□□□ 1.1
SMARCA2-216ENST00000457226 DENND4BO75064 1496 aaPredicted RBP21.93■■□□□ 1.1
SMARCA2-216ENST00000457226 AKNAQ7Z591 1439 aa21.93■■□□□ 1.1
SMARCA2-216ENST00000457226 TTC37Q6PGP7 1564 aa21.9■■□□□ 1.1
SMARCA2-216ENST00000457226 PLCH2O75038 1416 aa21.89■■□□□ 1.09
SMARCA2-216ENST00000457226 FRMPD1Q5SYB0 1578 aa21.88■■□□□ 1.09
SMARCA2-216ENST00000457226 CLIP1P30622 1438 aa21.88■■□□□ 1.09
SMARCA2-216ENST00000457226 TROQ12816 1431 aaPredicted RBP21.84■■□□□ 1.09
SMARCA2-216ENST00000457226 MAGI2Q86UL8 1455 aa21.83■■□□□ 1.09
SMARCA2-216ENST00000457226 CASKIN1Q8WXD9 1431 aa21.83■■□□□ 1.09
SMARCA2-216ENST00000457226 EFCAB2Q5VUJ9 269 aa21.83■■□□□ 1.09
SMARCA2-216ENST00000457226 KIF14Q15058 1648 aa21.83■■□□□ 1.08
SMARCA2-216ENST00000457226 CCDC18Q5T9S5 1454 aa21.83■■□□□ 1.08
SMARCA2-216ENST00000457226 ZMYM4Q5VZL5 1548 aa21.82■■□□□ 1.08
SMARCA2-216ENST00000457226 ARHGEF40Q8TER5 1519 aa21.82■■□□□ 1.08
SMARCA2-216ENST00000457226 RICTORQ6R327 1708 aa21.82■■□□□ 1.08
SMARCA2-216ENST00000457226 ARID4BQ4LE39 1312 aaPredicted RBP21.81■■□□□ 1.08
SMARCA2-216ENST00000457226 SCAPERQ9BY12 1400 aa21.79■■□□□ 1.08
SMARCA2-216ENST00000457226 MYO5CQ9NQX4 1742 aa21.77■■□□□ 1.08
SMARCA2-216ENST00000457226 ADAMTSL3P82987 1691 aa21.77■■□□□ 1.08
SMARCA2-216ENST00000457226 POGZQ7Z3K3 1410 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms