RNA–Protein interactions for RNA: ENST00000457183.6

THBS3-203, Transcript of thrombospondin 3, humanhuman

TSL 2 BASIC

Gene THBS3, Length 2,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-203ENST00000457183 PBRM1Q86U86 1689 aa14.94□□□□□ -0.02
THBS3-203ENST00000457183 CCER1Q8TC90 406 aaPredicted RBP14.94□□□□□ -0.02
THBS3-203ENST00000457183 TNIKQ9UKE5 1360 aa14.92□□□□□ -0.02
THBS3-203ENST00000457183 RAPGEF2Q9Y4G8 1499 aa14.92□□□□□ -0.02
THBS3-203ENST00000457183 MAGI1Q96QZ7 1491 aaPredicted RBP14.91□□□□□ -0.02
THBS3-203ENST00000457183 CARMIL1Q5VZK9 1371 aa14.91□□□□□ -0.02
THBS3-203ENST00000457183 CHMP7Q8WUX9 453 aaPredicted RBP14.9□□□□□ -0.02
THBS3-203ENST00000457183 SYNJ2O15056 1496 aa14.86□□□□□ -0.03
THBS3-203ENST00000457183 UBTFP17480 764 aaKnown RBP14.86□□□□□ -0.03
THBS3-203ENST00000457183 DIEXFQ68CQ4 756 aaKnown RBP14.84□□□□□ -0.03
THBS3-203ENST00000457183 ADAMTS12P58397 1594 aa14.84□□□□□ -0.03
THBS3-203ENST00000457183 FHAD1B1AJZ9 1412 aa14.83□□□□□ -0.04
THBS3-203ENST00000457183 GTF3C3Q9Y5Q9 886 aa14.82□□□□□ -0.04
THBS3-203ENST00000457183 RIMBP3CA6NJZ7 1639 aa14.79□□□□□ -0.04
THBS3-203ENST00000457183 RIMBP3BA6NNM3 1639 aa14.79□□□□□ -0.04
THBS3-203ENST00000457183 CEP162Q5TB80 1403 aa14.79□□□□□ -0.04
THBS3-203ENST00000457183 RIMBP3Q9UFD9 1639 aa14.79□□□□□ -0.04
THBS3-203ENST00000457183 CENPBP07199 599 aaPredicted RBP14.79□□□□□ -0.04
THBS3-203ENST00000457183 ARHGEF11O15085 1522 aa14.78□□□□□ -0.04
THBS3-203ENST00000457183 CTTNBP2Q8WZ74 1663 aa14.78□□□□□ -0.04
THBS3-203ENST00000457183 GRIN2AQ12879 1464 aa14.77□□□□□ -0.05
THBS3-203ENST00000457183 CLASP1Q7Z460 1538 aa14.75□□□□□ -0.05
THBS3-203ENST00000457183 MYT1Q01538 1121 aa14.74□□□□□ -0.05
THBS3-203ENST00000457183 TTBK1Q5TCY1 1321 aaPredicted RBP14.73□□□□□ -0.05
THBS3-203ENST00000457183 CLIP1P30622 1438 aa14.72□□□□□ -0.05
THBS3-203ENST00000457183 CEP170Q5SW79 1584 aa14.69□□□□□ -0.06
THBS3-203ENST00000457183 CYB5RLQ6IPT4 315 aa14.68□□□□□ -0.06
THBS3-203ENST00000457183 NUP160Q12769 1436 aa14.67□□□□□ -0.06
THBS3-203ENST00000457183 EFCAB5A4FU69 1503 aa14.65□□□□□ -0.06
THBS3-203ENST00000457183 ARAP1Q96P48 1450 aa14.65□□□□□ -0.06
THBS3-203ENST00000457183 IQGAP2Q13576 1575 aa14.64□□□□□ -0.07
THBS3-203ENST00000457183 KIAA0586Q9BVV6 1533 aa14.63□□□□□ -0.07
THBS3-203ENST00000457183 ARHGAP35Q9NRY4 1499 aa14.62□□□□□ -0.07
THBS3-203ENST00000457183 ZNF316A6NFI3 1004 aaPredicted RBP14.62□□□□□ -0.07
THBS3-203ENST00000457183 SAMD9Q5K651 1589 aa14.6□□□□□ -0.07
THBS3-203ENST00000457183 VPS8Q8N3P4 1428 aa14.59□□□□□ -0.07
THBS3-203ENST00000457183 UGGT2Q9NYU1 1516 aa14.58□□□□□ -0.07
THBS3-203ENST00000457183 ERCC6L2Q5T890 1561 aa14.58□□□□□ -0.08
THBS3-203ENST00000457183 SHROOM2Q13796 1616 aa14.57□□□□□ -0.08
THBS3-203ENST00000457183 RANGAP1P46060 587 aaPredicted RBP14.55□□□□□ -0.08
THBS3-203ENST00000457183 JPH4Q96JJ6 628 aa14.55□□□□□ -0.08
THBS3-203ENST00000457183 YTHDC1Q96MU7 727 aaKnown RBP14.55□□□□□ -0.08
THBS3-203ENST00000457183 PRG4Q92954 1404 aaPredicted RBP14.54□□□□□ -0.08
THBS3-203ENST00000457183 FMN1Q68DA7 1419 aa14.49□□□□□ -0.09
THBS3-203ENST00000457183 KIAA0556O60303 1618 aa14.49□□□□□ -0.09
THBS3-203ENST00000457183 MIER1Q8N108 512 aa14.49□□□□□ -0.09
THBS3-203ENST00000457183 FHOD3Q2V2M9 1422 aa14.48□□□□□ -0.09
THBS3-203ENST00000457183 DISP1Q96F81 1524 aa14.47□□□□□ -0.09
THBS3-203ENST00000457183 CARMIL2Q6F5E8 1435 aa14.45□□□□□ -0.1
THBS3-203ENST00000457183 TRHP20396 242 aaPredicted RBP14.44□□□□□ -0.1
THBS3-203ENST00000457183 FYCO1Q9BQS8 1478 aa14.44□□□□□ -0.1
THBS3-203ENST00000457183 MAP3K1Q13233 1512 aa14.44□□□□□ -0.1
THBS3-203ENST00000457183 CASKIN1Q8WXD9 1431 aa14.43□□□□□ -0.1
THBS3-203ENST00000457183 HNRNPUL2Q1KMD3 747 aaKnown RBP14.43□□□□□ -0.1
THBS3-203ENST00000457183 P3H3Q8IVL6 736 aa14.43□□□□□ -0.1
THBS3-203ENST00000457183 PCF11O94913 1555 aaKnown RBP14.42□□□□□ -0.1
THBS3-203ENST00000457183 APLP2Q06481 763 aa14.42□□□□□ -0.1
THBS3-203ENST00000457183 CFAP43Q8NDM7 1665 aa14.38□□□□□ -0.11
THBS3-203ENST00000457183 TIAM1Q13009 1591 aa14.37□□□□□ -0.11
THBS3-203ENST00000457183 HECW1Q76N89 1606 aa14.37□□□□□ -0.11
THBS3-203ENST00000457183 PTPRGP23470 1445 aa14.36□□□□□ -0.11
THBS3-203ENST00000457183 RAPGEF6Q8TEU7 1601 aa14.34□□□□□ -0.11
THBS3-203ENST00000457183 CCDC18Q5T9S5 1454 aa14.33□□□□□ -0.11
THBS3-203ENST00000457183 NPM1P06748 294 aaKnown RBP eCLIP14.33□□□□□ -0.12
THBS3-203ENST00000457183 LRRIQ1Q96JM4 1722 aa14.32□□□□□ -0.12
THBS3-203ENST00000457183 ADCY10Q96PN6 1610 aa14.32□□□□□ -0.12
THBS3-203ENST00000457183 ABCA8O94911 1581 aa14.29□□□□□ -0.12
THBS3-203ENST00000457183 LRRC9Q6ZRR7 1453 aa14.29□□□□□ -0.12
THBS3-203ENST00000457183 EPRSP07814 1512 aaKnown RBP14.27□□□□□ -0.12
THBS3-203ENST00000457183 ATP1B4Q9UN42 357 aaPredicted RBP14.26□□□□□ -0.13
THBS3-203ENST00000457183 NUP153P49790 1475 aaKnown RBP14.26□□□□□ -0.13
THBS3-203ENST00000457183 KANK4Q5T7N3 995 aaPredicted RBP14.25□□□□□ -0.13
THBS3-203ENST00000457183 UACAQ9BZF9 1416 aa14.25□□□□□ -0.13
THBS3-203ENST00000457183 PLB1Q6P1J6 1458 aa14.25□□□□□ -0.13
THBS3-203ENST00000457183 PRKCSHP14314 528 aaPredicted RBP14.24□□□□□ -0.13
THBS3-203ENST00000457183 EHBP1L1Q8N3D4 1523 aa14.23□□□□□ -0.13
THBS3-203ENST00000457183 ABCC2Q92887 1545 aa14.23□□□□□ -0.13
THBS3-203ENST00000457183 MAPKBP1O60336 1514 aa14.22□□□□□ -0.13
THBS3-203ENST00000457183 UHRF1BP1LA0JNW5 1464 aa14.21□□□□□ -0.13
THBS3-203ENST00000457183 CDK13Q14004 1512 aaKnown RBP14.2□□□□□ -0.14
THBS3-203ENST00000457183 MTUS2Q5JR59 1369 aa14.2□□□□□ -0.14
THBS3-203ENST00000457183 SUPT6HQ7KZ85 1726 aaKnown RBP14.19□□□□□ -0.14
THBS3-203ENST00000457183 CLSPNQ9HAW4 1339 aa14.19□□□□□ -0.14
THBS3-203ENST00000457183 FAM69CQ0P6D2 419 aa14.19□□□□□ -0.14
THBS3-203ENST00000457183 KIF13AQ9H1H9 1805 aa14.19□□□□□ -0.14
THBS3-203ENST00000457183 CDK11AQ9UQ88 783 aaPredicted RBP14.18□□□□□ -0.14
THBS3-203ENST00000457183 ABCC10Q5T3U5 1492 aa14.18□□□□□ -0.14
THBS3-203ENST00000457183 SUPT16HQ9Y5B9 1047 aaKnown RBP14.17□□□□□ -0.14
THBS3-203ENST00000457183 DHX57Q6P158 1386 aaKnown RBP14.17□□□□□ -0.14
THBS3-203ENST00000457183 MAGI3Q5TCQ9 1506 aa14.17□□□□□ -0.14
THBS3-203ENST00000457183 DIP2BQ9P265 1576 aa14.16□□□□□ -0.14
THBS3-203ENST00000457183 ATP10BO94823 1461 aa14.16□□□□□ -0.14
THBS3-203ENST00000457183 ZCCHC11Q5TAX3 1644 aaKnown RBP14.16□□□□□ -0.14
THBS3-203ENST00000457183 ASXL2Q76L83 1435 aa14.15□□□□□ -0.14
THBS3-203ENST00000457183 KDM5BQ9UGL1 1544 aa14.15□□□□□ -0.14
THBS3-203ENST00000457183 RRBP1Q9P2E9 1410 aaKnown RBP14.15□□□□□ -0.14
THBS3-203ENST00000457183 ARID3CA6NKF2 412 aa14.14□□□□□ -0.15
THBS3-203ENST00000457183 TROQ12816 1431 aaPredicted RBP14.12□□□□□ -0.15
THBS3-203ENST00000457183 NCOA2Q15596 1464 aa14.12□□□□□ -0.15
THBS3-203ENST00000457183 PHLDB1Q86UU1 1377 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms