RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 CEP170Q5SW79 1584 aa23.01■■□□□ 1.27
LINC00887-204ENST00000456816 NUP160Q12769 1436 aa23■■□□□ 1.27
LINC00887-204ENST00000456816 KIAA0586Q9BVV6 1533 aa22.92■■□□□ 1.26
LINC00887-204ENST00000456816 LOC105371045A0A1W2PR82 267 aa22.92■■□□□ 1.26
LINC00887-204ENST00000456816 CLASP1Q7Z460 1538 aa22.9■■□□□ 1.26
LINC00887-204ENST00000456816 CTTNBP2Q8WZ74 1663 aa22.9■■□□□ 1.26
LINC00887-204ENST00000456816 IQGAP2Q13576 1575 aa22.89■■□□□ 1.25
LINC00887-204ENST00000456816 RANGAP1P46060 587 aaPredicted RBP22.87■■□□□ 1.25
LINC00887-204ENST00000456816 TNIKQ9UKE5 1360 aa22.82■■□□□ 1.24
LINC00887-204ENST00000456816 JPH4Q96JJ6 628 aa22.82■■□□□ 1.24
LINC00887-204ENST00000456816 PRG4Q92954 1404 aaPredicted RBP22.76■■□□□ 1.23
LINC00887-204ENST00000456816 SHROOM2Q13796 1616 aa22.75■■□□□ 1.23
LINC00887-204ENST00000456816 UGGT2Q9NYU1 1516 aa22.74■■□□□ 1.23
LINC00887-204ENST00000456816 CARMIL2Q6F5E8 1435 aa22.73■■□□□ 1.23
LINC00887-204ENST00000456816 P3H3Q8IVL6 736 aa22.68■■□□□ 1.22
LINC00887-204ENST00000456816 CEP162Q5TB80 1403 aa22.67■■□□□ 1.22
LINC00887-204ENST00000456816 CLIP1P30622 1438 aa22.66■■□□□ 1.22
LINC00887-204ENST00000456816 TTBK1Q5TCY1 1321 aaPredicted RBP22.65■■□□□ 1.22
LINC00887-204ENST00000456816 ERCC6L2Q5T890 1561 aa22.65■■□□□ 1.22
LINC00887-204ENST00000456816 EFCAB5A4FU69 1503 aa22.65■■□□□ 1.22
LINC00887-204ENST00000456816 ARHGEF11O15085 1522 aa22.65■■□□□ 1.22
LINC00887-204ENST00000456816 DISP1Q96F81 1524 aa22.65■■□□□ 1.22
LINC00887-204ENST00000456816 KIAA0556O60303 1618 aa22.64■■□□□ 1.22
LINC00887-204ENST00000456816 SAMD9Q5K651 1589 aa22.61■■□□□ 1.21
LINC00887-204ENST00000456816 FHOD3Q2V2M9 1422 aa22.59■■□□□ 1.21
LINC00887-204ENST00000456816 RIMBP3CA6NJZ7 1639 aa22.59■■□□□ 1.21
LINC00887-204ENST00000456816 RIMBP3BA6NNM3 1639 aa22.59■■□□□ 1.21
LINC00887-204ENST00000456816 RIMBP3Q9UFD9 1639 aa22.59■■□□□ 1.21
LINC00887-204ENST00000456816 ARHGAP35Q9NRY4 1499 aa22.59■■□□□ 1.21
LINC00887-204ENST00000456816 PTPRGP23470 1445 aa22.55■■□□□ 1.2
LINC00887-204ENST00000456816 ARAP1Q96P48 1450 aa22.5■■□□□ 1.19
LINC00887-204ENST00000456816 CYB5RLQ6IPT4 315 aa22.48■■□□□ 1.19
LINC00887-204ENST00000456816 FMN1Q68DA7 1419 aa22.46■■□□□ 1.19
LINC00887-204ENST00000456816 ATP1B4Q9UN42 357 aaPredicted RBP22.41■■□□□ 1.18
LINC00887-204ENST00000456816 PLB1Q6P1J6 1458 aa22.4■■□□□ 1.18
LINC00887-204ENST00000456816 UACAQ9BZF9 1416 aa22.4■■□□□ 1.18
LINC00887-204ENST00000456816 VPS8Q8N3P4 1428 aa22.35■■□□□ 1.17
LINC00887-204ENST00000456816 RAPGEF6Q8TEU7 1601 aa22.35■■□□□ 1.17
LINC00887-204ENST00000456816 ABCA8O94911 1581 aa22.34■■□□□ 1.17
LINC00887-204ENST00000456816 ABCC2Q92887 1545 aa22.33■■□□□ 1.17
LINC00887-204ENST00000456816 ARID3CA6NKF2 412 aa22.33■■□□□ 1.17
LINC00887-204ENST00000456816 PCF11O94913 1555 aaKnown RBP22.32■■□□□ 1.16
LINC00887-204ENST00000456816 CASKIN1Q8WXD9 1431 aa22.31■■□□□ 1.16
LINC00887-204ENST00000456816 UHRF1BP1LA0JNW5 1464 aa22.3■■□□□ 1.16
LINC00887-204ENST00000456816 NPM1P06748 294 aaKnown RBP eCLIP22.3■■□□□ 1.16
LINC00887-204ENST00000456816 HECW1Q76N89 1606 aa22.3■■□□□ 1.16
LINC00887-204ENST00000456816 ADCY10Q96PN6 1610 aa22.3■■□□□ 1.16
LINC00887-204ENST00000456816 FYCO1Q9BQS8 1478 aa22.29■■□□□ 1.16
LINC00887-204ENST00000456816 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.28■■□□□ 1.16
LINC00887-204ENST00000456816 HNRNPUL2Q1KMD3 747 aaKnown RBP22.28■■□□□ 1.16
LINC00887-204ENST00000456816 NUP153P49790 1475 aaKnown RBP22.26■■□□□ 1.15
LINC00887-204ENST00000456816 APLP2Q06481 763 aa22.22■■□□□ 1.15
LINC00887-204ENST00000456816 EPRSP07814 1512 aaKnown RBP22.2■■□□□ 1.14
LINC00887-204ENST00000456816 CCDC18Q5T9S5 1454 aa22.19■■□□□ 1.14
LINC00887-204ENST00000456816 CDK13Q14004 1512 aaKnown RBP22.19■■□□□ 1.14
LINC00887-204ENST00000456816 KDM5BQ9UGL1 1544 aa22.19■■□□□ 1.14
LINC00887-204ENST00000456816 ATP10BO94823 1461 aa22.18■■□□□ 1.14
LINC00887-204ENST00000456816 ZCCHC11Q5TAX3 1644 aaKnown RBP22.17■■□□□ 1.14
LINC00887-204ENST00000456816 CDK11AQ9UQ88 783 aaPredicted RBP22.14■■□□□ 1.13
LINC00887-204ENST00000456816 PLEKHD1A6NEE1 506 aa22.11■■□□□ 1.13
LINC00887-204ENST00000456816 LRRIQ1Q96JM4 1722 aa22.1■■□□□ 1.13
LINC00887-204ENST00000456816 ASXL2Q76L83 1435 aa22.09■■□□□ 1.13
LINC00887-204ENST00000456816 TIAM1Q13009 1591 aa22.08■■□□□ 1.12
LINC00887-204ENST00000456816 MTUS2Q5JR59 1369 aa22.06■■□□□ 1.12
LINC00887-204ENST00000456816 CFAP43Q8NDM7 1665 aa22.06■■□□□ 1.12
LINC00887-204ENST00000456816 MAPKBP1O60336 1514 aa22.06■■□□□ 1.12
LINC00887-204ENST00000456816 WDR7Q9Y4E6 1490 aa22.05■■□□□ 1.12
LINC00887-204ENST00000456816 KCNH8Q96L42 1107 aa22.04■■□□□ 1.12
LINC00887-204ENST00000456816 MAP3K1Q13233 1512 aa22.03■■□□□ 1.12
LINC00887-204ENST00000456816 TROQ12816 1431 aaPredicted RBP22.01■■□□□ 1.11
LINC00887-204ENST00000456816 LRRC9Q6ZRR7 1453 aa21.98■■□□□ 1.11
LINC00887-204ENST00000456816 EHBP1L1Q8N3D4 1523 aa21.98■■□□□ 1.11
LINC00887-204ENST00000456816 MAGI3Q5TCQ9 1506 aa21.97■■□□□ 1.11
LINC00887-204ENST00000456816 KANK4Q5T7N3 995 aaPredicted RBP21.97■■□□□ 1.11
LINC00887-204ENST00000456816 PPARGC1BQ86YN6 1023 aaKnown RBP21.96■■□□□ 1.11
LINC00887-204ENST00000456816 KIF14Q15058 1648 aa21.95■■□□□ 1.1
LINC00887-204ENST00000456816 TRHP20396 242 aaPredicted RBP21.93■■□□□ 1.1
LINC00887-204ENST00000456816 FAM69CQ0P6D2 419 aa21.92■■□□□ 1.1
LINC00887-204ENST00000456816 ABCC10Q5T3U5 1492 aa21.91■■□□□ 1.1
LINC00887-204ENST00000456816 DIP2BQ9P265 1576 aa21.88■■□□□ 1.09
LINC00887-204ENST00000456816 SUPT6HQ7KZ85 1726 aaKnown RBP21.88■■□□□ 1.09
LINC00887-204ENST00000456816 NCOA2Q15596 1464 aa21.85■■□□□ 1.09
LINC00887-204ENST00000456816 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.85■■□□□ 1.09
LINC00887-204ENST00000456816 CCNB3Q8WWL7 1395 aa21.84■■□□□ 1.09
LINC00887-204ENST00000456816 GLI2P10070 1586 aa21.83■■□□□ 1.09
LINC00887-204ENST00000456816 TTC37Q6PGP7 1564 aa21.83■■□□□ 1.09
LINC00887-204ENST00000456816 ABCA9Q8IUA7 1624 aa21.82■■□□□ 1.08
LINC00887-204ENST00000456816 CD109Q6YHK3 1445 aa21.81■■□□□ 1.08
LINC00887-204ENST00000456816 KIF13AQ9H1H9 1805 aa21.78■■□□□ 1.08
LINC00887-204ENST00000456816 MAP3K4Q9Y6R4 1608 aa21.76■■□□□ 1.07
LINC00887-204ENST00000456816 MYO5CQ9NQX4 1742 aa21.75■■□□□ 1.07
LINC00887-204ENST00000456816 CFDP1Q9UEE9 299 aaPredicted RBP21.74■■□□□ 1.07
LINC00887-204ENST00000456816 ARHGAP5Q13017 1502 aa21.74■■□□□ 1.07
LINC00887-204ENST00000456816 PHLDB1Q86UU1 1377 aa21.74■■□□□ 1.07
LINC00887-204ENST00000456816 PLCH2O75038 1416 aa21.73■■□□□ 1.07
LINC00887-204ENST00000456816 GPATCH8Q9UKJ3 1502 aaKnown RBP21.73■■□□□ 1.07
LINC00887-204ENST00000456816 ITSN2Q9NZM3 1697 aa21.72■■□□□ 1.07
LINC00887-204ENST00000456816 MYOM3Q5VTT5 1437 aa21.72■■□□□ 1.07
LINC00887-204ENST00000456816 ZNF777Q9ULD5 760 aaPredicted RBP21.72■■□□□ 1.07
LINC00887-204ENST00000456816 PREX2Q70Z35 1606 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms