RNA–Protein interactions for RNA: ENST00000456682.1

KCMF1-204, Transcript of potassium channel modulatory factor 1, humanhuman

TSL 3

Gene KCMF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1-204ENST00000456682 EEA1Q15075 1411 aa43.91■■■■■ 4.62
KCMF1-204ENST00000456682 ARAP1Q96P48 1450 aa43.89■■■■■ 4.62
KCMF1-204ENST00000456682 JPH4Q96JJ6 628 aa43.89■■■■■ 4.62
KCMF1-204ENST00000456682 CSRNP3Q8WYN3 585 aa43.87■■■■■ 4.61
KCMF1-204ENST00000456682 PRXQ9BXM0 1461 aa43.86■■■■■ 4.61
KCMF1-204ENST00000456682 CYB5RLQ6IPT4 315 aa43.85■■■■■ 4.61
KCMF1-204ENST00000456682 ERCC6L2Q5T890 1561 aa43.77■■■■■ 4.6
KCMF1-204ENST00000456682 PRG4Q92954 1404 aaPredicted RBP43.75■■■■■ 4.59
KCMF1-204ENST00000456682 FAM9AQ8IZU1 332 aaPredicted RBP43.67■■■■■ 4.58
KCMF1-204ENST00000456682 IQGAP2Q13576 1575 aa43.64■■■■■ 4.58
KCMF1-204ENST00000456682 CTTNBP2Q8WZ74 1663 aa43.49■■■■■ 4.55
KCMF1-204ENST00000456682 UGGT2Q9NYU1 1516 aa43.44■■■■■ 4.54
KCMF1-204ENST00000456682 CARMIL2Q6F5E8 1435 aa43.44■■■■■ 4.54
KCMF1-204ENST00000456682 KIF21BO75037 1637 aa43.4■■■■■ 4.54
KCMF1-204ENST00000456682 DISP1Q96F81 1524 aa43.36■■■■■ 4.53
KCMF1-204ENST00000456682 TNIKQ9UKE5 1360 aa43.29■■■■■ 4.52
KCMF1-204ENST00000456682 PTPRGP23470 1445 aa43.26■■■■■ 4.52
KCMF1-204ENST00000456682 KIAA0556O60303 1618 aa43.22■■■■■ 4.51
KCMF1-204ENST00000456682 GOLGA3Q08378 1498 aa43.21■■■■■ 4.51
KCMF1-204ENST00000456682 TTBK1Q5TCY1 1321 aaPredicted RBP43.1■■■■■ 4.49
KCMF1-204ENST00000456682 UBTFP17480 764 aaKnown RBP43.06■■■■■ 4.48
KCMF1-204ENST00000456682 ADCY10Q96PN6 1610 aa43.04■■■■■ 4.48
KCMF1-204ENST00000456682 EHMT2Q96KQ7 1210 aa43.04■■■■■ 4.48
KCMF1-204ENST00000456682 SAMD9Q5K651 1589 aa42.98■■■■■ 4.47
KCMF1-204ENST00000456682 UACAQ9BZF9 1416 aa42.97■■■■■ 4.47
KCMF1-204ENST00000456682 NPM1P06748 294 aaKnown RBP eCLIP42.97■■■■■ 4.47
KCMF1-204ENST00000456682 UHRF1BP1LA0JNW5 1464 aa42.94■■■■■ 4.47
KCMF1-204ENST00000456682 P3H3Q8IVL6 736 aa42.92■■■■■ 4.46
KCMF1-204ENST00000456682 TRHP20396 242 aaPredicted RBP42.91■■■■■ 4.46
KCMF1-204ENST00000456682 RANGAP1P46060 587 aaPredicted RBP42.89■■■■■ 4.46
KCMF1-204ENST00000456682 ABCC2Q92887 1545 aa42.87■■■■■ 4.45
KCMF1-204ENST00000456682 EFCAB5A4FU69 1503 aa42.81■■■■■ 4.44
KCMF1-204ENST00000456682 PLB1Q6P1J6 1458 aa42.8■■■■■ 4.44
KCMF1-204ENST00000456682 MAPKBP1O60336 1514 aa42.79■■■■■ 4.44
KCMF1-204ENST00000456682 ABCA8O94911 1581 aa42.78■■■■■ 4.44
KCMF1-204ENST00000456682 KDM5BQ9UGL1 1544 aa42.73■■■■■ 4.43
KCMF1-204ENST00000456682 FHOD3Q2V2M9 1422 aa42.71■■■■■ 4.43
KCMF1-204ENST00000456682 ARHGAP35Q9NRY4 1499 aa42.62■■■■■ 4.41
KCMF1-204ENST00000456682 ABCC10Q5T3U5 1492 aa42.6■■■■■ 4.41
KCMF1-204ENST00000456682 ZCCHC11Q5TAX3 1644 aaKnown RBP42.59■■■■■ 4.41
KCMF1-204ENST00000456682 ASXL2Q76L83 1435 aa42.56■■■■■ 4.4
KCMF1-204ENST00000456682 RAPGEF6Q8TEU7 1601 aa42.53■■■■■ 4.4
KCMF1-204ENST00000456682 KIF13AQ9H1H9 1805 aa42.52■■■■■ 4.4
KCMF1-204ENST00000456682 FAM69CQ0P6D2 419 aa42.5■■■■■ 4.39
KCMF1-204ENST00000456682 DIP2BQ9P265 1576 aa42.48■■■■■ 4.39
KCMF1-204ENST00000456682 ATP10BO94823 1461 aa42.44■■■■■ 4.38
KCMF1-204ENST00000456682 FMN1Q68DA7 1419 aa42.44■■■■■ 4.38
KCMF1-204ENST00000456682 NUP153P49790 1475 aaKnown RBP42.4■■■■■ 4.38
KCMF1-204ENST00000456682 CLIP1P30622 1438 aa42.39■■■■■ 4.38
KCMF1-204ENST00000456682 LOC105371045A0A1W2PR82 267 aa42.38■■■■■ 4.37
KCMF1-204ENST00000456682 ARID3CA6NKF2 412 aa42.36■■■■■ 4.37
KCMF1-204ENST00000456682 WDR7Q9Y4E6 1490 aa42.36■■■■■ 4.37
KCMF1-204ENST00000456682 GLI2P10070 1586 aa42.32■■■■■ 4.37
KCMF1-204ENST00000456682 EPRSP07814 1512 aaKnown RBP42.32■■■■■ 4.37
KCMF1-204ENST00000456682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP42.23■■■■■ 4.35
KCMF1-204ENST00000456682 HNRNPUL2Q1KMD3 747 aaKnown RBP42.23■■■■■ 4.35
KCMF1-204ENST00000456682 CEP162Q5TB80 1403 aa42.21■■■■■ 4.35
KCMF1-204ENST00000456682 HECW1Q76N89 1606 aa42.18■■■■■ 4.34
KCMF1-204ENST00000456682 KCNH8Q96L42 1107 aa42.18■■■■■ 4.34
KCMF1-204ENST00000456682 ATP1B4Q9UN42 357 aaPredicted RBP42.15■■■■■ 4.34
KCMF1-204ENST00000456682 CASKIN1Q8WXD9 1431 aa42.12■■■■■ 4.33
KCMF1-204ENST00000456682 PLEKHD1A6NEE1 506 aa42.11■■■■■ 4.33
KCMF1-204ENST00000456682 MAP3K4Q9Y6R4 1608 aa42.09■■■■■ 4.33
KCMF1-204ENST00000456682 TSPOAP1O95153 1857 aa42.09■■■■■ 4.33
KCMF1-204ENST00000456682 CDK13Q14004 1512 aaKnown RBP42.08■■■■■ 4.33
KCMF1-204ENST00000456682 PCF11O94913 1555 aaKnown RBP42.04■■■■■ 4.32
KCMF1-204ENST00000456682 PPRC1Q5VV67 1664 aaKnown RBP42■■■■■ 4.31
KCMF1-204ENST00000456682 CFAP43Q8NDM7 1665 aa42■■■■■ 4.31
KCMF1-204ENST00000456682 FYCO1Q9BQS8 1478 aa41.99■■■■■ 4.31
KCMF1-204ENST00000456682 CD109Q6YHK3 1445 aa41.97■■■■■ 4.31
KCMF1-204ENST00000456682 CDK11AQ9UQ88 783 aaPredicted RBP41.96■■■■■ 4.31
KCMF1-204ENST00000456682 LRRIQ1Q96JM4 1722 aa41.95■■■■■ 4.31
KCMF1-204ENST00000456682 ABCA9Q8IUA7 1624 aa41.93■■■■■ 4.3
KCMF1-204ENST00000456682 CCDC18Q5T9S5 1454 aa41.92■■■■■ 4.3
KCMF1-204ENST00000456682 TEX14Q8IWB6 1497 aa41.91■■■■■ 4.3
KCMF1-204ENST00000456682 MAGI3Q5TCQ9 1506 aa41.9■■■■■ 4.3
KCMF1-204ENST00000456682 TROQ12816 1431 aaPredicted RBP41.8■■■■■ 4.28
KCMF1-204ENST00000456682 KDM6BO15054 1643 aa41.77■■■■■ 4.28
KCMF1-204ENST00000456682 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP41.77■■■■■ 4.281e-6■■□□□ 12.5
KCMF1-204ENST00000456682 VPS8Q8N3P4 1428 aa41.72■■■■■ 4.27
KCMF1-204ENST00000456682 TTC37Q6PGP7 1564 aa41.67■■■■■ 4.26
KCMF1-204ENST00000456682 COL17A1Q9UMD9 1497 aaPredicted RBP41.66■■■■■ 4.26
KCMF1-204ENST00000456682 KIF14Q15058 1648 aa41.65■■■■■ 4.26
KCMF1-204ENST00000456682 PHLDB1Q86UU1 1377 aa41.64■■■■■ 4.26
KCMF1-204ENST00000456682 NEO1Q92859 1461 aa41.6■■■■■ 4.25
KCMF1-204ENST00000456682 PLCH2O75038 1416 aa41.57■■■■■ 4.25
KCMF1-204ENST00000456682 ARAP3Q8WWN8 1544 aa41.54■■■■■ 4.24
KCMF1-204ENST00000456682 MTUS2Q5JR59 1369 aa41.5■■■■■ 4.23
KCMF1-204ENST00000456682 FANCAO15360 1455 aa41.5■■■■■ 4.23
KCMF1-204ENST00000456682 MYO5CQ9NQX4 1742 aa41.48■■■■■ 4.23
KCMF1-204ENST00000456682 CFAP74Q9C0B2 1584 aa41.46■■■■■ 4.23
KCMF1-204ENST00000456682 AKNAQ7Z591 1439 aa41.45■■■■■ 4.23
KCMF1-204ENST00000456682 TIAM1Q13009 1591 aa41.43■■■■■ 4.22
KCMF1-204ENST00000456682 EFCAB2Q5VUJ9 269 aa41.42■■■■■ 4.22
KCMF1-204ENST00000456682 EHBP1L1Q8N3D4 1523 aa41.4■■■■■ 4.22
KCMF1-204ENST00000456682 MAP3K1Q13233 1512 aa41.39■■■■■ 4.22
KCMF1-204ENST00000456682 ARHGAP5Q13017 1502 aa41.33■■■■■ 4.21
KCMF1-204ENST00000456682 CDC42BPBQ9Y5S2 1711 aa41.32■■■■■ 4.21
KCMF1-204ENST00000456682 PREX2Q70Z35 1606 aa41.32■■■■■ 4.2
KCMF1-204ENST00000456682 RAPGEF3O95398 923 aa41.31■■■■■ 4.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms